RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 MYH6P13533 1939 aa8.74□□□□□ -1.01
ABCA4-202ENST00000460514 TLR2O60603 784 aa8.74□□□□□ -1.01
ABCA4-202ENST00000460514 CTDNEP1O95476 244 aa8.74□□□□□ -1.01
ABCA4-202ENST00000460514 CYP2C8P10632 490 aa8.74□□□□□ -1.01
ABCA4-202ENST00000460514 CALML3P27482 149 aa8.74□□□□□ -1.01
ABCA4-202ENST00000460514 GJB2P29033 226 aa8.74□□□□□ -1.01
ABCA4-202ENST00000460514 STAT3P40763 770 aa8.74□□□□□ -1.01
ABCA4-202ENST00000460514 ERVK-9P63128 1117 aa8.74□□□□□ -1.01
ABCA4-202ENST00000460514 ERVK-24P63145 666 aa8.74□□□□□ -1.01
ABCA4-202ENST00000460514 ST3GAL1Q11201 340 aa8.74□□□□□ -1.01
ABCA4-202ENST00000460514 PLS1Q14651 629 aa8.74□□□□□ -1.01
ABCA4-202ENST00000460514 FAM110CQ1W6H9 321 aa8.74□□□□□ -1.01
ABCA4-202ENST00000460514 SNRNP48Q6IEG0 339 aaKnown RBP8.74□□□□□ -1.01
ABCA4-202ENST00000460514 HEATR3Q7Z4Q2 680 aa8.74□□□□□ -1.01
ABCA4-202ENST00000460514 CPXCR1Q8N123 301 aa8.74□□□□□ -1.01
ABCA4-202ENST00000460514 SAMD3Q8N6K7 520 aa8.74□□□□□ -1.01
ABCA4-202ENST00000460514 RGS22Q8NE09 1264 aa8.74□□□□□ -1.01
ABCA4-202ENST00000460514 GPRC5AQ8NFJ5 357 aa8.74□□□□□ -1.01
ABCA4-202ENST00000460514 BICD2Q8TD16 824 aa8.74□□□□□ -1.01
ABCA4-202ENST00000460514 DDX11Q96FC9 970 aa8.74□□□□□ -1.01
ABCA4-202ENST00000460514 ALG1Q9BT22 464 aa8.74□□□□□ -1.01
ABCA4-202ENST00000460514 BRMS1Q9HCU9 246 aa8.74□□□□□ -1.01
ABCA4-202ENST00000460514 SAGE1Q9NXZ1 904 aa8.74□□□□□ -1.01
ABCA4-202ENST00000460514 BARHL2Q9NY43 387 aa8.74□□□□□ -1.01
ABCA4-202ENST00000460514 MORF4L1Q9UBU8 362 aa8.74□□□□□ -1.01
ABCA4-202ENST00000460514 FBXO40Q9UH90 709 aa8.74□□□□□ -1.01
ABCA4-202ENST00000460514 PCDHA1Q9Y5I3 950 aa8.74□□□□□ -1.01
ABCA4-202ENST00000460514 PARP14Q460N5 1801 aa8.74□□□□□ -1.01
ABCA4-202ENST00000460514 BAZ2BQ9UIF8 2168 aaKnown RBP8.73□□□□□ -1.01
ABCA4-202ENST00000460514 THSD7BQ9C0I4 1608 aa8.73□□□□□ -1.01
ABCA4-202ENST00000460514 LOC100996750A0A140TA64 210 aa8.73□□□□□ -1.01
ABCA4-202ENST00000460514 H3BQV1 296 aa8.73□□□□□ -1.01
ABCA4-202ENST00000460514 JAK2O60674 1132 aa8.73□□□□□ -1.01
ABCA4-202ENST00000460514 ALAS1P13196 640 aa8.73□□□□□ -1.01
ABCA4-202ENST00000460514 GNA11P29992 359 aa8.73□□□□□ -1.01
ABCA4-202ENST00000460514 NAPAP54920 295 aa8.73□□□□□ -1.01
ABCA4-202ENST00000460514 TMEM132BQ14DG7 1078 aa8.73□□□□□ -1.01
ABCA4-202ENST00000460514 SAFBQ15424 915 aaKnown RBP eCLIP8.73□□□□□ -1.01
ABCA4-202ENST00000460514 SLC35G1Q2M3R5 365 aa8.73□□□□□ -1.01
ABCA4-202ENST00000460514 USH1GQ495M9 461 aa8.73□□□□□ -1.01
ABCA4-202ENST00000460514 MCTP2Q6DN12 878 aa8.73□□□□□ -1.01
ABCA4-202ENST00000460514 GALNT17Q6IS24 598 aa8.73□□□□□ -1.01
ABCA4-202ENST00000460514 MCF2L2Q86YR7 1114 aa8.73□□□□□ -1.01
ABCA4-202ENST00000460514 RIOX2Q8IUF8 465 aa8.73□□□□□ -1.01
ABCA4-202ENST00000460514 ANKRD13CQ8N6S4 541 aa8.73□□□□□ -1.01
ABCA4-202ENST00000460514 SHCBP1Q8NEM2 672 aa8.73□□□□□ -1.01
ABCA4-202ENST00000460514 CHST13Q8NET6 341 aa8.73□□□□□ -1.01
ABCA4-202ENST00000460514 REPS2Q8NFH8 660 aa8.73□□□□□ -1.01
ABCA4-202ENST00000460514 CUL5Q93034 780 aa8.73□□□□□ -1.01
ABCA4-202ENST00000460514 C8orf76Q96K31 380 aa8.73□□□□□ -1.01
ABCA4-202ENST00000460514 IPO9Q96P70 1041 aaKnown RBP8.73□□□□□ -1.01
ABCA4-202ENST00000460514 ZIC5Q96T25 663 aa8.73□□□□□ -1.01
ABCA4-202ENST00000460514 CFHR5Q9BXR6 569 aa8.73□□□□□ -1.01
ABCA4-202ENST00000460514 KRTAP4-6Q9BYQ5 205 aa8.73□□□□□ -1.01
ABCA4-202ENST00000460514 SPATC1LQ9H0A9 340 aa8.73□□□□□ -1.01
ABCA4-202ENST00000460514 MROH8Q9H579 483 aa8.73□□□□□ -1.01
ABCA4-202ENST00000460514 RAVER2Q9HCJ3 691 aaKnown RBP8.73□□□□□ -1.01
ABCA4-202ENST00000460514 C6orf50Q9HD87 102 aa8.73□□□□□ -1.01
ABCA4-202ENST00000460514 ZNF214Q9UL59 606 aaPredicted RBP8.73□□□□□ -1.01
ABCA4-202ENST00000460514 RLFQ13129 1914 aa8.73□□□□□ -1.01
ABCA4-202ENST00000460514 A0A0G2JMZ2 1700 aa8.72□□□□□ -1.01
ABCA4-202ENST00000460514 hCG_1642624A0A1W2PR95 340 aa8.72□□□□□ -1.01
ABCA4-202ENST00000460514 ESYT2A0FGR8 921 aa8.72□□□□□ -1.01
ABCA4-202ENST00000460514 FDPSP14324 419 aaKnown RBP8.72□□□□□ -1.01
ABCA4-202ENST00000460514 MAPK4P31152 587 aa8.72□□□□□ -1.01
ABCA4-202ENST00000460514 SLC4A3P48751 1232 aa8.72□□□□□ -1.01
ABCA4-202ENST00000460514 MRPL12P52815 198 aaKnown RBP8.72□□□□□ -1.01
ABCA4-202ENST00000460514 NLRP5P59047 1200 aa8.72□□□□□ -1.01
ABCA4-202ENST00000460514 SNAP25P60880 206 aa8.72□□□□□ -1.01
ABCA4-202ENST00000460514 CRHR2Q13324 411 aa8.72□□□□□ -1.01
ABCA4-202ENST00000460514 KIF22Q14807 665 aa8.72□□□□□ -1.01
ABCA4-202ENST00000460514 ARHGEF6Q15052 776 aa8.72□□□□□ -1.01
ABCA4-202ENST00000460514 PKN1Q16512 942 aa8.72□□□□□ -1.01
ABCA4-202ENST00000460514 LARP1BQ659C4 914 aaKnown RBP8.72□□□□□ -1.01
ABCA4-202ENST00000460514 WWC2Q6AWC2 1192 aa8.72□□□□□ -1.01
ABCA4-202ENST00000460514 NCAPG2Q86XI2 1143 aa8.72□□□□□ -1.01
ABCA4-202ENST00000460514 GPKOWQ92917 476 aaPredicted RBP eCLIP8.72□□□□□ -1.01
ABCA4-202ENST00000460514 AGBL1Q96MI9 1066 aa8.72□□□□□ -1.01
ABCA4-202ENST00000460514 TRERF1Q96PN7 1200 aa8.72□□□□□ -1.01
ABCA4-202ENST00000460514 ACAD9Q9H845 621 aa8.72□□□□□ -1.01
ABCA4-202ENST00000460514 RNF146Q9NTX7 359 aa8.72□□□□□ -1.01
ABCA4-202ENST00000460514 MAP3K20Q9NYL2 800 aaKnown RBP8.72□□□□□ -1.01
ABCA4-202ENST00000460514 BTBD7Q9P203 1132 aa8.72□□□□□ -1.01
ABCA4-202ENST00000460514 RBPJLQ9UBG7 517 aa8.72□□□□□ -1.01
ABCA4-202ENST00000460514 IVNS1ABPQ9Y6Y0 642 aa8.72□□□□□ -1.01
ABCA4-202ENST00000460514 ZNF536O15090 1300 aa8.72□□□□□ -1.01
ABCA4-202ENST00000460514 ADGRA2Q96PE1 1338 aa8.72□□□□□ -1.01
ABCA4-202ENST00000460514 COL11A1P12107 1806 aaPredicted RBP8.71□□□□□ -1.01
ABCA4-202ENST00000460514 SMCO2A6NFE2 343 aa8.71□□□□□ -1.02
ABCA4-202ENST00000460514 STXBP3O00186 592 aa8.71□□□□□ -1.02
ABCA4-202ENST00000460514 STRNO43815 780 aa8.71□□□□□ -1.02
ABCA4-202ENST00000460514 PPFIA3O75145 1194 aa8.71□□□□□ -1.02
ABCA4-202ENST00000460514 TRPA1O75762 1119 aa8.71□□□□□ -1.02
ABCA4-202ENST00000460514 BCRP11274 1271 aa8.71□□□□□ -1.02
ABCA4-202ENST00000460514 ADCY7P51828 1080 aa8.71□□□□□ -1.02
ABCA4-202ENST00000460514 FOXK1P85037 733 aa8.71□□□□□ -1.02
ABCA4-202ENST00000460514 GNL2Q13823 731 aaKnown RBP8.71□□□□□ -1.02
ABCA4-202ENST00000460514 NOM1Q5C9Z4 860 aaKnown RBP8.71□□□□□ -1.02
ABCA4-202ENST00000460514 WDR78Q5VTH9 848 aa8.71□□□□□ -1.02
ABCA4-202ENST00000460514 C17orf99Q6UX52 265 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms