RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 KCTD17Q8N5Z5 321 aa9.88□□□□□ -0.83
HDAC3-202ENST00000459727 CCDC155Q8N6L0 562 aa9.88□□□□□ -0.83
HDAC3-202ENST00000459727 ZNF507Q8TCN5 953 aa9.88□□□□□ -0.83
HDAC3-202ENST00000459727 CPLX3Q8WVH0 158 aa9.88□□□□□ -0.83
HDAC3-202ENST00000459727 CCDC17Q96LX7 622 aa9.88□□□□□ -0.83
HDAC3-202ENST00000459727 EIF3CQ99613 913 aaKnown RBP9.88□□□□□ -0.83
HDAC3-202ENST00000459727 PARD6BQ9BYG5 372 aa9.88□□□□□ -0.83
HDAC3-202ENST00000459727 COA1Q9GZY4 146 aa9.88□□□□□ -0.83
HDAC3-202ENST00000459727 NT5C3AQ9H0P0 336 aa9.88□□□□□ -0.83
HDAC3-202ENST00000459727 BMP2KQ9NSY1 1161 aaPredicted RBP9.88□□□□□ -0.83
HDAC3-202ENST00000459727 CALCOCO1Q9P1Z2 691 aa9.88□□□□□ -0.83
HDAC3-202ENST00000459727 MYO6Q9UM54 1294 aa9.88□□□□□ -0.83
HDAC3-202ENST00000459727 GDAQ9Y2T3 454 aa9.88□□□□□ -0.83
HDAC3-202ENST00000459727 SBF2Q86WG5 1849 aa9.88□□□□□ -0.83
HDAC3-202ENST00000459727 USP17L3A6NCW0 530 aa9.87□□□□□ -0.83
HDAC3-202ENST00000459727 USP17L4A6NCW7 530 aa9.87□□□□□ -0.83
HDAC3-202ENST00000459727 SMIM22K7EJ46 135 aa9.87□□□□□ -0.83
HDAC3-202ENST00000459727 PES1O00541 588 aaKnown RBP9.87□□□□□ -0.83
HDAC3-202ENST00000459727 HLA-DOAP06340 250 aa9.87□□□□□ -0.83
HDAC3-202ENST00000459727 SNHG28P0DPA3 235 aa9.87□□□□□ -0.83
HDAC3-202ENST00000459727 RXRBP28702 533 aa9.87□□□□□ -0.83
HDAC3-202ENST00000459727 CASP1P29466 404 aa9.87□□□□□ -0.83
HDAC3-202ENST00000459727 HNRNPH3P31942 346 aaKnown RBP9.87□□□□□ -0.83
HDAC3-202ENST00000459727 MRPL12P52815 198 aaKnown RBP9.87□□□□□ -0.83
HDAC3-202ENST00000459727 ERVK-24P63145 666 aa9.87□□□□□ -0.83
HDAC3-202ENST00000459727 TBC1D8BQ0IIM8 1120 aa9.87□□□□□ -0.83
HDAC3-202ENST00000459727 MTF1Q14872 753 aa9.87□□□□□ -0.83
HDAC3-202ENST00000459727 LETM2Q2VYF4 491 aa9.87□□□□□ -0.83
HDAC3-202ENST00000459727 NOM1Q5C9Z4 860 aaKnown RBP9.87□□□□□ -0.83
HDAC3-202ENST00000459727 MFSD14BQ5SR56 506 aa9.87□□□□□ -0.83
HDAC3-202ENST00000459727 KRT79Q5XKE5 535 aa9.87□□□□□ -0.83
HDAC3-202ENST00000459727 USP17L1Q7RTZ2 530 aa9.87□□□□□ -0.83
HDAC3-202ENST00000459727 MAPKAPK5Q8IW41 473 aa9.87□□□□□ -0.83
HDAC3-202ENST00000459727 SLC35F6Q8N357 371 aa9.87□□□□□ -0.83
HDAC3-202ENST00000459727 DYNLL2Q96FJ2 89 aa9.87□□□□□ -0.83
HDAC3-202ENST00000459727 CNOT6LQ96LI5 555 aaKnown RBP9.87□□□□□ -0.83
HDAC3-202ENST00000459727 UBXN6Q9BZV1 441 aa9.87□□□□□ -0.83
HDAC3-202ENST00000459727 TMX4Q9H1E5 349 aaPredicted RBP9.87□□□□□ -0.83
HDAC3-202ENST00000459727 TMEM60Q9H2L4 133 aa9.87□□□□□ -0.83
HDAC3-202ENST00000459727 VIPAS39Q9H9C1 493 aa9.87□□□□□ -0.83
HDAC3-202ENST00000459727 PSD3Q9NYI0 1048 aa9.87□□□□□ -0.83
HDAC3-202ENST00000459727 LRRC37AA6NMS7 1700 aa9.87□□□□□ -0.83
HDAC3-202ENST00000459727 TAF1LQ8IZX4 1826 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 TTC26A0AVF1 554 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 FANCGO15287 622 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 TTLL1O95922 423 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 ARHGAP25P42331 645 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 GPSM2P81274 684 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 ITIH3Q06033 890 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 KIF5AQ12840 1032 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 TRAF1Q13077 416 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 SMC1AQ14683 1233 aaKnown RBP9.86□□□□□ -0.83
HDAC3-202ENST00000459727 DIXDC1Q155Q3 683 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 MAN2A1Q16706 1144 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 TXNRD1Q16881 649 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 LONRF2Q1L5Z9 754 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 HSP90B2PQ58FF3 399 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 CCDC122Q5T0U0 273 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 CENPPQ6IPU0 288 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 PRR5LQ6MZQ0 368 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 TYW1BQ6NUM6 668 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 MOXD1Q6UVY6 613 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 PPP4R3CPQ6ZMV5 832 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 TXNRD3Q86VQ6 643 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 IRF2BP1Q8IU81 584 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 GOLGA6L1Q8N7Z2 621 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 TRIM58Q8NG06 486 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 TBCKQ8TEA7 893 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 LARP4BQ92615 738 aaKnown RBP9.86□□□□□ -0.83
HDAC3-202ENST00000459727 STAMQ92783 540 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 CUL5Q93034 780 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 JAKMIP2Q96AA8 810 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 CEP95Q96GE4 821 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 PCMTD1Q96MG8 357 aaPredicted RBP9.86□□□□□ -0.83
HDAC3-202ENST00000459727 C8orf37Q96NL8 207 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 ALS2CR12Q96Q35 445 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 NOC4LQ9BVI4 516 aaKnown RBP9.86□□□□□ -0.83
HDAC3-202ENST00000459727 TTYH3Q9C0H2 523 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 EHD4Q9H223 541 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 MED4Q9NPJ6 270 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 LRWD1Q9UFC0 647 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 TSKSQ9UJT2 592 aa9.86□□□□□ -0.83
HDAC3-202ENST00000459727 QSER1Q2KHR3 1735 aa9.85□□□□□ -0.83
HDAC3-202ENST00000459727 PNMA6FA0A0J9YX94 578 aa9.85□□□□□ -0.83
HDAC3-202ENST00000459727 WTIPA6NIX2 430 aaPredicted RBP9.85□□□□□ -0.83
HDAC3-202ENST00000459727 MAP2K7O14733 419 aa9.85□□□□□ -0.83
HDAC3-202ENST00000459727 TACC1O75410 805 aa9.85□□□□□ -0.83
HDAC3-202ENST00000459727 TBC1D8O95759 1140 aa9.85□□□□□ -0.83
HDAC3-202ENST00000459727 PDHBP11177 359 aa9.85□□□□□ -0.83
HDAC3-202ENST00000459727 PRLRP16471 622 aa9.85□□□□□ -0.83
HDAC3-202ENST00000459727 CYP2C19P33261 490 aa9.85□□□□□ -0.83
HDAC3-202ENST00000459727 PLA2G4AP47712 749 aa9.85□□□□□ -0.83
HDAC3-202ENST00000459727 VAV2P52735 878 aa9.85□□□□□ -0.83
HDAC3-202ENST00000459727 RHBDL3P58872 404 aa9.85□□□□□ -0.83
HDAC3-202ENST00000459727 AMPD2Q01433 879 aa9.85□□□□□ -0.83
HDAC3-202ENST00000459727 SF3B2Q13435 895 aaKnown RBP9.85□□□□□ -0.83
HDAC3-202ENST00000459727 PAPD7Q5XG87 772 aaKnown RBP9.85□□□□□ -0.83
HDAC3-202ENST00000459727 TRAPPC11Q7Z392 1133 aa9.85□□□□□ -0.83
HDAC3-202ENST00000459727 SP8Q8IXZ3 490 aa9.85□□□□□ -0.83
HDAC3-202ENST00000459727 LRRN4CLQ8ND94 238 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms