RNA–Protein interactions for RNA: ENST00000458277.1

HMGB4-202, Transcript of high mobility group box 4, humanhuman

TSL 3

Gene HMGB4, Length 437 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-202ENST00000458277 ZBTB10Q96DT7 871 aa6.28□□□□□ -1.4
HMGB4-202ENST00000458277 FAM46AQ96IP4 442 aaKnown RBP6.28□□□□□ -1.4
HMGB4-202ENST00000458277 UIMC1Q96RL1 719 aa6.28□□□□□ -1.4
HMGB4-202ENST00000458277 GORASP1Q9BQQ3 440 aa6.28□□□□□ -1.4
HMGB4-202ENST00000458277 TRAIPQ9BWF2 469 aa6.28□□□□□ -1.4
HMGB4-202ENST00000458277 DDX19AQ9NUU7 478 aaKnown RBP6.28□□□□□ -1.4
HMGB4-202ENST00000458277 QPCTLQ9NXS2 382 aa6.28□□□□□ -1.4
HMGB4-202ENST00000458277 PIM2Q9P1W9 311 aa6.28□□□□□ -1.4
HMGB4-202ENST00000458277 ZNF148Q9UQR1 794 aa6.28□□□□□ -1.4
HMGB4-202ENST00000458277 EXOC6BQ9Y2D4 811 aa6.28□□□□□ -1.4
HMGB4-202ENST00000458277 ARHGEF12Q9NZN5 1544 aa6.28□□□□□ -1.4
HMGB4-202ENST00000458277 POLR3AO14802 1390 aaPredicted RBP6.28□□□□□ -1.4
HMGB4-202ENST00000458277 PIK3C2GO75747 1445 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 ASXL2Q76L83 1435 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 TARSL2A2RTX5 802 aaKnown RBP6.27□□□□□ -1.41
HMGB4-202ENST00000458277 BUB1BO60566 1050 aaPredicted RBP6.27□□□□□ -1.41
HMGB4-202ENST00000458277 DNAJC8O75937 253 aaPredicted RBP6.27□□□□□ -1.41
HMGB4-202ENST00000458277 CCDC159P0C7I6 412 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 MSL3P1P0C860 447 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 CCDC166P0CW27 439 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 STIP1P31948 543 aaKnown RBP6.27□□□□□ -1.41
HMGB4-202ENST00000458277 KIF5BP33176 963 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 HSPA4P34932 840 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 CUL4BQ13620 913 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 GNL2Q13823 731 aaKnown RBP6.27□□□□□ -1.41
HMGB4-202ENST00000458277 Q4G0T1 1027 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 IER5Q5VY09 327 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 MIS18BP1Q6P0N0 1132 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 SYNE3Q6ZMZ3 975 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 BEND4Q6ZU67 534 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 APBB1IPQ7Z5R6 666 aaPredicted RBP6.27□□□□□ -1.41
HMGB4-202ENST00000458277 USP48Q86UV5 1035 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 CHD1LQ86WJ1 897 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 FAM20CQ8IXL6 584 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 DEPDC4Q8N2C3 294 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 ARHGAP18Q8N392 663 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 FNBP4Q8N3X1 1017 aaPredicted RBP6.27□□□□□ -1.41
HMGB4-202ENST00000458277 ATP11CQ8NB49 1132 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 PARD3BQ8TEW8 1205 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 CACTINQ8WUQ7 758 aaKnown RBP6.27□□□□□ -1.41
HMGB4-202ENST00000458277 KAT2BQ92831 832 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 TBC1D31Q96DN5 1066 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 MFSD14AQ96MC6 490 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 IWS1Q96ST2 819 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 FAM83CQ9BQN1 747 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 VCX3BQ9H321 246 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 VCPKMTQ9H867 229 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 VCX3AQ9NNX9 186 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 ZCCHC17Q9NP64 241 aaKnown RBP6.27□□□□□ -1.41
HMGB4-202ENST00000458277 RAB21Q9UL25 225 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 TMEM98Q9Y2Y6 226 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 TMED5Q9Y3A6 229 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 PCDHGC5Q9Y5F6 944 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 MBD5Q9P267 1494 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 WDR7Q9Y4E6 1490 aa6.27□□□□□ -1.41
HMGB4-202ENST00000458277 EVC2Q86UK5 1308 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 FAM135AQ9P2D6 1515 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 CCDC162PA2VCL2 907 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 LRRD1A4D1F6 860 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 RASSF10A6NK89 507 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 B4DLN1 442 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.26□□□□□ -1.41
HMGB4-202ENST00000458277 TGFBR3LH3BV60 316 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 MYO1BO43795 1136 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 KDM1AO60341 852 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 ZBED4O75132 1171 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 RASSF9O75901 435 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 TMCC1O94876 653 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 VIMP08670 466 aaKnown RBP6.26□□□□□ -1.41
HMGB4-202ENST00000458277 ABL2P42684 1182 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 FNTAP49354 379 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 AMPHP49418 695 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 NRLP54845 237 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 GNAI1P63096 354 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 MRPS25P82663 173 aaKnown RBP6.26□□□□□ -1.41
HMGB4-202ENST00000458277 ACTN3Q08043 901 aaPredicted RBP6.26□□□□□ -1.41
HMGB4-202ENST00000458277 KCNB1Q14721 858 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 CCDC152Q4G0S7 254 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 VPS53Q5VIR6 699 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 SFMBT2Q5VUG0 894 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 FBXW10Q5XX13 1052 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 KRTAP5-3Q6L8H2 238 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 RSRC2Q7L4I2 434 aaKnown RBP6.26□□□□□ -1.41
HMGB4-202ENST00000458277 ANKRD13AQ8IZ07 590 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 RSPH1Q8WYR4 309 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 TBC1D5Q92609 795 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 RUBCNQ92622 972 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 DHTKD1Q96HY7 919 aaPredicted RBP6.26□□□□□ -1.41
HMGB4-202ENST00000458277 GDAP1L1Q96MZ0 367 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 ZMAT2Q96NC0 199 aaKnown RBP6.26□□□□□ -1.41
HMGB4-202ENST00000458277 OSBPL5Q9H0X9 879 aaPredicted RBP6.26□□□□□ -1.41
HMGB4-202ENST00000458277 NUP62CLQ9H1M0 184 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 DMGDHQ9UI17 866 aaKnown RBP6.26□□□□□ -1.41
HMGB4-202ENST00000458277 KIAA1024Q9UPX6 916 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 BCS1LQ9Y276 419 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 ZDHHC9Q9Y397 364 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 TCOF1Q13428 1488 aaKnown RBP6.26□□□□□ -1.41
HMGB4-202ENST00000458277 CFAP74Q9C0B2 1584 aa6.26□□□□□ -1.41
HMGB4-202ENST00000458277 NPHP3Q7Z494 1330 aa6.25□□□□□ -1.41
HMGB4-202ENST00000458277 MAP3K4Q9Y6R4 1608 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms