RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 TMX4Q9H1E5 349 aaPredicted RBP13.95□□□□□ -0.18
LINC00959-201ENST00000456581 TMEM60Q9H2L4 133 aa13.95□□□□□ -0.18
LINC00959-201ENST00000456581 TAF3Q5VWG9 929 aa13.94□□□□□ -0.18
LINC00959-201ENST00000456581 GSPT2Q8IYD1 628 aaKnown RBP13.94□□□□□ -0.18
LINC00959-201ENST00000456581 TRIML1Q8N9V2 468 aa13.94□□□□□ -0.18
LINC00959-201ENST00000456581 GPCPD1Q9NPB8 672 aa13.94□□□□□ -0.18
LINC00959-201ENST00000456581 CDC23Q9UJX2 597 aa13.94□□□□□ -0.18
LINC00959-201ENST00000456581 GUCA1BQ9UMX6 200 aa13.94□□□□□ -0.18
LINC00959-201ENST00000456581 PCDHA6Q9UN73 950 aa13.94□□□□□ -0.18
LINC00959-201ENST00000456581 PCDHA4Q9UN74 947 aa13.94□□□□□ -0.18
LINC00959-201ENST00000456581 PCDHA8Q9Y5H6 950 aa13.94□□□□□ -0.18
LINC00959-201ENST00000456581 MPHOSPH10O00566 681 aaKnown RBP13.94□□□□□ -0.18
LINC00959-201ENST00000456581 MYO1BO43795 1136 aa13.94□□□□□ -0.18
LINC00959-201ENST00000456581 RAD21O60216 631 aa13.94□□□□□ -0.18
LINC00959-201ENST00000456581 ECE2O60344 883 aa13.94□□□□□ -0.18
LINC00959-201ENST00000456581 ARHGAP25P42331 645 aa13.94□□□□□ -0.18
LINC00959-201ENST00000456581 ATP2C1P98194 919 aaPredicted RBP13.94□□□□□ -0.18
LINC00959-201ENST00000456581 SLC15A2Q16348 729 aa13.94□□□□□ -0.18
LINC00959-201ENST00000456581 FLAD1Q8NFF5 587 aa13.94□□□□□ -0.18
LINC00959-201ENST00000456581 TEKT1Q969V4 418 aa13.94□□□□□ -0.18
LINC00959-201ENST00000456581 ZNF287Q9HBT7 754 aa13.94□□□□□ -0.18
LINC00959-201ENST00000456581 ABHD10Q9NUJ1 306 aa13.94□□□□□ -0.18
LINC00959-201ENST00000456581 MTMR4Q9NYA4 1195 aa13.94□□□□□ -0.18
LINC00959-201ENST00000456581 SERPINB13Q9UIV8 391 aa13.94□□□□□ -0.18
LINC00959-201ENST00000456581 M0R2N6 131 aa13.93□□□□□ -0.18
LINC00959-201ENST00000456581 SHMT1P34896 483 aa13.93□□□□□ -0.18
LINC00959-201ENST00000456581 RABEP2Q9H5N1 569 aa13.93□□□□□ -0.18
LINC00959-201ENST00000456581 DNAJC18Q9H819 358 aa13.93□□□□□ -0.18
LINC00959-201ENST00000456581 BARHL2Q9NY43 387 aa13.93□□□□□ -0.18
LINC00959-201ENST00000456581 REXO2Q9Y3B8 237 aaKnown RBP13.93□□□□□ -0.18
LINC00959-201ENST00000456581 DDTLA6NHG4 134 aaPredicted RBP13.93□□□□□ -0.18
LINC00959-201ENST00000456581 LRRIQ3A6PVS8 624 aaPredicted RBP13.93□□□□□ -0.18
LINC00959-201ENST00000456581 C21orf2O43822 256 aa13.93□□□□□ -0.18
LINC00959-201ENST00000456581 TPM1P09493 284 aa13.93□□□□□ -0.18
LINC00959-201ENST00000456581 PDHBP11177 359 aa13.93□□□□□ -0.18
LINC00959-201ENST00000456581 KLK7P49862 253 aa13.93□□□□□ -0.18
LINC00959-201ENST00000456581 TTBK2Q6IQ55 1244 aa13.93□□□□□ -0.18
LINC00959-201ENST00000456581 DEFB132Q7Z7B7 95 aa13.93□□□□□ -0.18
LINC00959-201ENST00000456581 NELFBQ8WX92 580 aa13.93□□□□□ -0.18
LINC00959-201ENST00000456581 CAPZA3Q96KX2 299 aa13.93□□□□□ -0.18
LINC00959-201ENST00000456581 CCDC194A0A1B0GVG4 234 aa13.92□□□□□ -0.18
LINC00959-201ENST00000456581 CTAGE9A4FU28 777 aa13.92□□□□□ -0.18
LINC00959-201ENST00000456581 MAP2K7O14733 419 aa13.92□□□□□ -0.18
LINC00959-201ENST00000456581 KRT9P35527 623 aa13.92□□□□□ -0.18
LINC00959-201ENST00000456581 SLC16A2P36021 539 aa13.92□□□□□ -0.18
LINC00959-201ENST00000456581 NAPAP54920 295 aa13.92□□□□□ -0.18
LINC00959-201ENST00000456581 E2F4Q16254 413 aa13.92□□□□□ -0.18
LINC00959-201ENST00000456581 KANK3Q6NY19 840 aa13.92□□□□□ -0.18
LINC00959-201ENST00000456581 COA7Q96BR5 231 aa13.92□□□□□ -0.18
LINC00959-201ENST00000456581 PRCPP42785 496 aa13.92□□□□□ -0.18
LINC00959-201ENST00000456581 GNAQP50148 359 aa13.92□□□□□ -0.18
LINC00959-201ENST00000456581 UBXN1Q04323 297 aa13.92□□□□□ -0.18
LINC00959-201ENST00000456581 FKBP15Q5T1M5 1219 aa13.92□□□□□ -0.18
LINC00959-201ENST00000456581 JAKMIP3Q5VZ66 844 aa13.92□□□□□ -0.18
LINC00959-201ENST00000456581 PDXDC2PQ6P474 469 aa13.92□□□□□ -0.18
LINC00959-201ENST00000456581 ELOA2Q8IYF1 753 aaPredicted RBP13.92□□□□□ -0.18
LINC00959-201ENST00000456581 C4orf32Q8N8J7 132 aa13.92□□□□□ -0.18
LINC00959-201ENST00000456581 TMEM260Q9NX78 707 aa13.92□□□□□ -0.18
LINC00959-201ENST00000456581 KCNJ18B7U540 433 aa13.91□□□□□ -0.18
LINC00959-201ENST00000456581 ERCC3P19447 782 aa13.91□□□□□ -0.18
LINC00959-201ENST00000456581 CALML3P27482 149 aa13.91□□□□□ -0.18
LINC00959-201ENST00000456581 COPB1P53618 953 aaKnown RBP13.91□□□□□ -0.18
LINC00959-201ENST00000456581 KCNJ12Q14500 433 aa13.91□□□□□ -0.18
LINC00959-201ENST00000456581 DACT2Q5SW24 774 aa13.91□□□□□ -0.18
LINC00959-201ENST00000456581 CCDC151A5D8V7 595 aa13.91□□□□□ -0.18
LINC00959-201ENST00000456581 FILIP1LQ4L180 1135 aa13.91□□□□□ -0.18
LINC00959-201ENST00000456581 CCDC178Q5BJE1 867 aa13.91□□□□□ -0.18
LINC00959-201ENST00000456581 SH3BP5LQ7L8J4 393 aa13.91□□□□□ -0.18
LINC00959-201ENST00000456581 PODNQ7Z5L7 613 aa13.91□□□□□ -0.18
LINC00959-201ENST00000456581 ZSCAN29Q8IWY8 852 aaPredicted RBP13.91□□□□□ -0.18
LINC00959-201ENST00000456581 LRRC15Q8TF66 581 aa13.91□□□□□ -0.18
LINC00959-201ENST00000456581 FERMT2Q96AC1 680 aa13.91□□□□□ -0.18
LINC00959-201ENST00000456581 GSDMAQ96QA5 445 aa13.91□□□□□ -0.18
LINC00959-201ENST00000456581 CAMKK2Q96RR4 588 aa13.91□□□□□ -0.18
LINC00959-201ENST00000456581 BIN2Q9UBW5 565 aaPredicted RBP13.91□□□□□ -0.18
LINC00959-201ENST00000456581 FOCADQ5VW36 1801 aa13.91□□□□□ -0.18
LINC00959-201ENST00000456581 TTC26A0AVF1 554 aa13.91□□□□□ -0.18
LINC00959-201ENST00000456581 SMCO2A6NFE2 343 aa13.91□□□□□ -0.18
LINC00959-201ENST00000456581 TCP11X2Q5H9J9 407 aa13.91□□□□□ -0.18
LINC00959-201ENST00000456581 KCTD1Q719H9 257 aa13.91□□□□□ -0.18
LINC00959-201ENST00000456581 IRF2BP1Q8IU81 584 aa13.91□□□□□ -0.18
LINC00959-201ENST00000456581 POLD4Q9HCU8 107 aa13.91□□□□□ -0.18
LINC00959-201ENST00000456581 FAM198AQ9UFP1 575 aa13.91□□□□□ -0.18
LINC00959-201ENST00000456581 L1RE1Q9UN81 338 aa13.91□□□□□ -0.18
LINC00959-201ENST00000456581 DUSP10Q9Y6W6 482 aa13.91□□□□□ -0.18
LINC00959-201ENST00000456581 YDJCA8MPS7 323 aa13.9□□□□□ -0.18
LINC00959-201ENST00000456581 HHIPL2Q6UWX4 724 aa13.9□□□□□ -0.18
LINC00959-201ENST00000456581 C7orf43Q8WVR3 580 aa13.9□□□□□ -0.18
LINC00959-201ENST00000456581 SPZ1Q9BXG8 430 aa13.9□□□□□ -0.18
LINC00959-201ENST00000456581 TDRD3Q9H7E2 651 aaKnown RBP13.9□□□□□ -0.18
LINC00959-201ENST00000456581 SUGT1Q9Y2Z0 365 aa13.9□□□□□ -0.18
LINC00959-201ENST00000456581 PAK1Q13153 545 aa13.9□□□□□ -0.18
LINC00959-201ENST00000456581 LETM2Q2VYF4 491 aa13.9□□□□□ -0.18
LINC00959-201ENST00000456581 CNGA4Q8IV77 575 aa13.9□□□□□ -0.18
LINC00959-201ENST00000456581 CCDC102AQ96A19 550 aa13.9□□□□□ -0.18
LINC00959-201ENST00000456581 RRP36Q96EU6 259 aaKnown RBP13.9□□□□□ -0.18
LINC00959-201ENST00000456581 UIMC1Q96RL1 719 aa13.9□□□□□ -0.18
LINC00959-201ENST00000456581 NAPGQ99747 312 aaPredicted RBP13.9□□□□□ -0.18
LINC00959-201ENST00000456581 SH3GLB2Q9NR46 395 aa13.9□□□□□ -0.18
LINC00959-201ENST00000456581 RCCD1A6NED2 376 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms