RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 DCTN4Q9UJW0 460 aa4.96□□□□□ -1.62
RBM39-220ENST00000455343 NIP7Q9Y221 180 aaKnown RBP eCLIP4.96□□□□□ -1.62
RBM39-220ENST00000455343 ZNF652Q9Y2D9 606 aa4.96□□□□□ -1.62
RBM39-220ENST00000455343 PDE4DIPQ5VU43 2346 aa4.96□□□□□ -1.62
RBM39-220ENST00000455343 KIF7Q2M1P5 1343 aa4.96□□□□□ -1.62
RBM39-220ENST00000455343 NPC1L1Q9UHC9 1359 aa4.95□□□□□ -1.62
RBM39-220ENST00000455343 GNAT3A8MTJ3 354 aa4.95□□□□□ -1.62
RBM39-220ENST00000455343 FAM87AP0C7U9 286 aa4.95□□□□□ -1.62
RBM39-220ENST00000455343 PIP4K2AP48426 406 aaPredicted RBP4.95□□□□□ -1.62
RBM39-220ENST00000455343 TEFQ10587 303 aa4.95□□□□□ -1.62
RBM39-220ENST00000455343 DSC3Q14574 896 aa4.95□□□□□ -1.62
RBM39-220ENST00000455343 TTLL4Q14679 1199 aa4.95□□□□□ -1.62
RBM39-220ENST00000455343 HLFQ16534 295 aa4.95□□□□□ -1.62
RBM39-220ENST00000455343 ZNF574Q6ZN55 896 aaPredicted RBP4.95□□□□□ -1.62
RBM39-220ENST00000455343 SULF2Q8IWU5 870 aa4.95□□□□□ -1.62
RBM39-220ENST00000455343 SMYD4Q8IYR2 804 aaPredicted RBP4.95□□□□□ -1.62
RBM39-220ENST00000455343 STK11IPQ8N1F8 1099 aa4.95□□□□□ -1.62
RBM39-220ENST00000455343 STK35Q8TDR2 534 aa4.95□□□□□ -1.62
RBM39-220ENST00000455343 CRAMP1Q96RY5 1269 aa4.95□□□□□ -1.62
RBM39-220ENST00000455343 RTFDC1Q9BY42 306 aaPredicted RBP4.95□□□□□ -1.62
RBM39-220ENST00000455343 BCO2Q9BYV7 579 aa4.95□□□□□ -1.62
RBM39-220ENST00000455343 RNF186Q9NXI6 227 aa4.95□□□□□ -1.62
RBM39-220ENST00000455343 TIMELESSQ9UNS1 1208 aa4.95□□□□□ -1.62
RBM39-220ENST00000455343 GNEQ9Y223 722 aaKnown RBP4.95□□□□□ -1.62
RBM39-220ENST00000455343 SLC5A6Q9Y289 635 aa4.95□□□□□ -1.62
RBM39-220ENST00000455343 SCN11AQ9UI33 1791 aa4.95□□□□□ -1.62
RBM39-220ENST00000455343 RIC1Q4ADV7 1423 aa4.95□□□□□ -1.62
RBM39-220ENST00000455343 SCN7AQ01118 1682 aa4.95□□□□□ -1.62
RBM39-220ENST00000455343 CDHR2Q9BYE9 1310 aa4.95□□□□□ -1.62
RBM39-220ENST00000455343 CCDC88AQ3V6T2 1871 aa4.94□□□□□ -1.62
RBM39-220ENST00000455343 ABCC12Q96J65 1359 aa4.94□□□□□ -1.62
RBM39-220ENST00000455343 PNMA6FA0A0J9YX94 578 aa4.94□□□□□ -1.62
RBM39-220ENST00000455343 ERVV-1B6SEH8 477 aa4.94□□□□□ -1.62
RBM39-220ENST00000455343 DIAPH1O60610 1272 aaKnown RBP4.94□□□□□ -1.62
RBM39-220ENST00000455343 NEFMP07197 916 aa4.94□□□□□ -1.62
RBM39-220ENST00000455343 SNRPA1P09661 255 aaKnown RBP4.94□□□□□ -1.62
RBM39-220ENST00000455343 GMPSP49915 693 aaPredicted RBP4.94□□□□□ -1.62
RBM39-220ENST00000455343 HUNKP57058 714 aa4.94□□□□□ -1.62
RBM39-220ENST00000455343 KIF23Q02241 960 aaPredicted RBP4.94□□□□□ -1.62
RBM39-220ENST00000455343 ENOX2Q16206 610 aaKnown RBP4.94□□□□□ -1.62
RBM39-220ENST00000455343 RGMBQ6NW40 437 aa4.94□□□□□ -1.62
RBM39-220ENST00000455343 CTU1Q7Z7A3 348 aaKnown RBP4.94□□□□□ -1.62
RBM39-220ENST00000455343 NIM1KQ8IY84 436 aa4.94□□□□□ -1.62
RBM39-220ENST00000455343 KCNB2Q92953 911 aa4.94□□□□□ -1.62
RBM39-220ENST00000455343 GCC1Q96CN9 775 aa4.94□□□□□ -1.62
RBM39-220ENST00000455343 PPP4R2Q9NY27 417 aa4.94□□□□□ -1.62
RBM39-220ENST00000455343 BIN2Q9UBW5 565 aaPredicted RBP4.94□□□□□ -1.62
RBM39-220ENST00000455343 ZNRF3Q9ULT6 936 aa4.94□□□□□ -1.62
RBM39-220ENST00000455343 U3KQE9 123 aa4.94□□□□□ -1.62
RBM39-220ENST00000455343 HTTP42858 3142 aa4.94□□□□□ -1.62
RBM39-220ENST00000455343 UBR2Q8IWV8 1755 aa4.93□□□□□ -1.62
RBM39-220ENST00000455343 A0A0C4DFX4 3053 aa4.93□□□□□ -1.62
RBM39-220ENST00000455343 TREHO43280 583 aa4.93□□□□□ -1.62
RBM39-220ENST00000455343 PPIP5K2O43314 1243 aa4.93□□□□□ -1.62
RBM39-220ENST00000455343 RNGTTO60942 597 aaKnown RBP4.93□□□□□ -1.62
RBM39-220ENST00000455343 HCLS1P14317 486 aaPredicted RBP4.93□□□□□ -1.62
RBM39-220ENST00000455343 JUNBP17275 347 aaPredicted RBP4.93□□□□□ -1.62
RBM39-220ENST00000455343 ARNTP27540 789 aa4.93□□□□□ -1.62
RBM39-220ENST00000455343 KIAA2012Q0VF49 1180 aa4.93□□□□□ -1.62
RBM39-220ENST00000455343 PKN2Q16513 984 aaKnown RBP4.93□□□□□ -1.62
RBM39-220ENST00000455343 AOC3Q16853 763 aa4.93□□□□□ -1.62
RBM39-220ENST00000455343 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.93□□□□□ -1.62
RBM39-220ENST00000455343 HABP4Q5JVS0 413 aaKnown RBP4.93□□□□□ -1.62
RBM39-220ENST00000455343 OGFOD2Q6N063 350 aa4.93□□□□□ -1.62
RBM39-220ENST00000455343 NXPE4Q6UWF7 544 aa4.93□□□□□ -1.62
RBM39-220ENST00000455343 DLK2Q6UY11 383 aa4.93□□□□□ -1.62
RBM39-220ENST00000455343 SPRED2Q7Z698 418 aa4.93□□□□□ -1.62
RBM39-220ENST00000455343 USP48Q86UV5 1035 aa4.93□□□□□ -1.62
RBM39-220ENST00000455343 PLD6Q8N2A8 252 aaKnown RBP4.93□□□□□ -1.62
RBM39-220ENST00000455343 FAM181AQ8N9Y4 354 aa4.93□□□□□ -1.62
RBM39-220ENST00000455343 DPF2Q92785 391 aa4.93□□□□□ -1.62
RBM39-220ENST00000455343 MISP3Q96FF7 219 aa4.93□□□□□ -1.62
RBM39-220ENST00000455343 ASIC4Q96FT7 647 aa4.93□□□□□ -1.62
RBM39-220ENST00000455343 POLR3GLQ9BT43 218 aa4.93□□□□□ -1.62
RBM39-220ENST00000455343 NYXQ9GZU5 481 aa4.93□□□□□ -1.62
RBM39-220ENST00000455343 ZNF408Q9H9D4 720 aa4.93□□□□□ -1.62
RBM39-220ENST00000455343 AKAP2Q9Y2D5 859 aa4.93□□□□□ -1.62
RBM39-220ENST00000455343 KNSTRNQ9Y448 316 aa4.93□□□□□ -1.62
RBM39-220ENST00000455343 ATP6V0A2Q9Y487 856 aa4.93□□□□□ -1.62
RBM39-220ENST00000455343 BRCA2P51587 3418 aa4.93□□□□□ -1.62
RBM39-220ENST00000455343 ARFGEF2Q9Y6D5 1785 aa4.93□□□□□ -1.62
RBM39-220ENST00000455343 UBN2Q6ZU65 1347 aa4.93□□□□□ -1.62
RBM39-220ENST00000455343 IBTKQ9P2D0 1353 aaPredicted RBP4.92□□□□□ -1.62
RBM39-220ENST00000455343 SZT2Q5T011 3432 aa4.92□□□□□ -1.62
RBM39-220ENST00000455343 SHTN1A0MZ66 631 aa4.92□□□□□ -1.62
RBM39-220ENST00000455343 YDJCA8MPS7 323 aa4.92□□□□□ -1.62
RBM39-220ENST00000455343 LEFTY1O75610 366 aa4.92□□□□□ -1.62
RBM39-220ENST00000455343 PAPLNO95428 1278 aa4.92□□□□□ -1.62
RBM39-220ENST00000455343 NTSR2O95665 410 aa4.92□□□□□ -1.62
RBM39-220ENST00000455343 NME2P22392 152 aa4.92□□□□□ -1.62
RBM39-220ENST00000455343 MAPK1P28482 360 aa4.92□□□□□ -1.62
RBM39-220ENST00000455343 ERVK-24P63145 666 aa4.92□□□□□ -1.62
RBM39-220ENST00000455343 ZNF252P-AS1Q0IIN9 211 aa4.92□□□□□ -1.62
RBM39-220ENST00000455343 PLCL1Q15111 1095 aa4.92□□□□□ -1.62
RBM39-220ENST00000455343 ZNF792Q3KQV3 632 aa4.92□□□□□ -1.62
RBM39-220ENST00000455343 ZC3H12AQ5D1E8 599 aaKnown RBP4.92□□□□□ -1.62
RBM39-220ENST00000455343 SLC10A5Q5PT55 438 aa4.92□□□□□ -1.62
RBM39-220ENST00000455343 SUSD4Q5VX71 490 aa4.92□□□□□ -1.62
RBM39-220ENST00000455343 ZNF34Q8IZ26 560 aa4.92□□□□□ -1.62
RBM39-220ENST00000455343 C3orf58Q8NDZ4 430 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms