RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 PABPC4Q13310 644 aaKnown RBP eCLIP9.23□□□□□ -0.93
SMCO1-202ENST00000452776 CUL4BQ13620 913 aa9.23□□□□□ -0.93
SMCO1-202ENST00000452776 BYSLQ13895 437 aaKnown RBP9.23□□□□□ -0.93
SMCO1-202ENST00000452776 BEND3Q5T5X7 828 aa9.23□□□□□ -0.93
SMCO1-202ENST00000452776 HDGFL1Q5TGJ6 251 aa9.23□□□□□ -0.93
SMCO1-202ENST00000452776 ZNF365Q70YC5 407 aa9.23□□□□□ -0.93
SMCO1-202ENST00000452776 HDAC7Q8WUI4 952 aa9.23□□□□□ -0.93
SMCO1-202ENST00000452776 C17orf50Q8WW18 174 aa9.23□□□□□ -0.93
SMCO1-202ENST00000452776 CCDC134Q9H6E4 229 aa9.23□□□□□ -0.93
SMCO1-202ENST00000452776 REXO2Q9Y3B8 237 aaKnown RBP9.23□□□□□ -0.93
SMCO1-202ENST00000452776 DAAM1Q9Y4D1 1078 aa9.23□□□□□ -0.93
SMCO1-202ENST00000452776 MAP2P11137 1827 aaKnown RBP9.22□□□□□ -0.93
SMCO1-202ENST00000452776 ERCC6L2Q5T890 1561 aa9.22□□□□□ -0.93
SMCO1-202ENST00000452776 O00370 1275 aa9.22□□□□□ -0.93
SMCO1-202ENST00000452776 SH2B2O14492 632 aaPredicted RBP9.22□□□□□ -0.93
SMCO1-202ENST00000452776 TMCC1O94876 653 aa9.22□□□□□ -0.93
SMCO1-202ENST00000452776 ABL1P00519 1130 aa9.22□□□□□ -0.93
SMCO1-202ENST00000452776 ZFXP17010 805 aaPredicted RBP9.22□□□□□ -0.93
SMCO1-202ENST00000452776 PTPREP23469 700 aa9.22□□□□□ -0.93
SMCO1-202ENST00000452776 HPDP32754 393 aaPredicted RBP9.22□□□□□ -0.93
SMCO1-202ENST00000452776 MSH2P43246 934 aa9.22□□□□□ -0.93
SMCO1-202ENST00000452776 HERVK_113P62684 666 aa9.22□□□□□ -0.93
SMCO1-202ENST00000452776 PTPN21Q16825 1174 aa9.22□□□□□ -0.93
SMCO1-202ENST00000452776 RINLQ6ZS11 566 aa9.22□□□□□ -0.93
SMCO1-202ENST00000452776 ZNF589Q86UQ0 364 aaPredicted RBP9.22□□□□□ -0.93
SMCO1-202ENST00000452776 PHF12Q96QT6 1004 aa9.22□□□□□ -0.93
SMCO1-202ENST00000452776 XPO6Q96QU8 1125 aaKnown RBP9.22□□□□□ -0.93
SMCO1-202ENST00000452776 MPHOSPH6Q99547 160 aaKnown RBP9.22□□□□□ -0.93
SMCO1-202ENST00000452776 FAM129AQ9BZQ8 928 aa9.22□□□□□ -0.93
SMCO1-202ENST00000452776 MAF1Q9H063 256 aa9.22□□□□□ -0.93
SMCO1-202ENST00000452776 STMN4Q9H169 189 aaPredicted RBP9.22□□□□□ -0.93
SMCO1-202ENST00000452776 EPB41L5Q9HCM4 733 aa9.22□□□□□ -0.93
SMCO1-202ENST00000452776 ARHGEF3Q9NR81 526 aa9.22□□□□□ -0.93
SMCO1-202ENST00000452776 AFF2P51816 1311 aa9.22□□□□□ -0.93
SMCO1-202ENST00000452776 NUTM2BA6NNL0 878 aaPredicted RBP9.21□□□□□ -0.93
SMCO1-202ENST00000452776 NUTM2EB1AL46 878 aaPredicted RBP9.21□□□□□ -0.93
SMCO1-202ENST00000452776 E7EWF7 191 aa9.21□□□□□ -0.93
SMCO1-202ENST00000452776 CES2O00748 559 aa9.21□□□□□ -0.93
SMCO1-202ENST00000452776 ATMINO43313 823 aaPredicted RBP9.21□□□□□ -0.93
SMCO1-202ENST00000452776 ATP2C2O75185 946 aa9.21□□□□□ -0.93
SMCO1-202ENST00000452776 IDO1P14902 403 aa9.21□□□□□ -0.93
SMCO1-202ENST00000452776 CALB2P22676 271 aa9.21□□□□□ -0.93
SMCO1-202ENST00000452776 EEF1GP26641 437 aaKnown RBP9.21□□□□□ -0.93
SMCO1-202ENST00000452776 ABL2P42684 1182 aa9.21□□□□□ -0.93
SMCO1-202ENST00000452776 DNM2P50570 870 aa9.21□□□□□ -0.93
SMCO1-202ENST00000452776 COPS2P61201 443 aa9.21□□□□□ -0.93
SMCO1-202ENST00000452776 KRT31Q15323 416 aa9.21□□□□□ -0.93
SMCO1-202ENST00000452776 SAFBQ15424 915 aaKnown RBP eCLIP9.21□□□□□ -0.93
SMCO1-202ENST00000452776 QPCTQ16769 361 aa9.21□□□□□ -0.93
SMCO1-202ENST00000452776 PARP6Q2NL67 630 aa9.21□□□□□ -0.93
SMCO1-202ENST00000452776 Q4G0T1 1027 aa9.21□□□□□ -0.93
SMCO1-202ENST00000452776 PABPC1LQ4VXU2 614 aaKnown RBP9.21□□□□□ -0.93
SMCO1-202ENST00000452776 HSP90AA4PQ58FG1 418 aa9.21□□□□□ -0.93
SMCO1-202ENST00000452776 ANO7Q6IWH7 933 aa9.21□□□□□ -0.93
SMCO1-202ENST00000452776 CCDC80Q76M96 950 aa9.21□□□□□ -0.93
SMCO1-202ENST00000452776 HOOK3Q86VS8 718 aa9.21□□□□□ -0.93
SMCO1-202ENST00000452776 CNBD1Q8NA66 436 aa9.21□□□□□ -0.93
SMCO1-202ENST00000452776 STKLD1Q8NE28 680 aa9.21□□□□□ -0.93
SMCO1-202ENST00000452776 IFT81Q8WYA0 676 aa9.21□□□□□ -0.93
SMCO1-202ENST00000452776 KLHL29Q96CT2 875 aa9.21□□□□□ -0.93
SMCO1-202ENST00000452776 AGAP3Q96P47 875 aa9.21□□□□□ -0.93
SMCO1-202ENST00000452776 ISCUQ9H1K1 167 aa9.21□□□□□ -0.93
SMCO1-202ENST00000452776 BOLA2Q9H3K6 86 aa9.21□□□□□ -0.93
SMCO1-202ENST00000452776 ESF1Q9H501 851 aaKnown RBP9.21□□□□□ -0.93
SMCO1-202ENST00000452776 LUC7LQ9NQ29 371 aaKnown RBP9.21□□□□□ -0.93
SMCO1-202ENST00000452776 RMND1Q9NWS8 449 aa9.21□□□□□ -0.93
SMCO1-202ENST00000452776 NFU1Q9UMS0 254 aa9.21□□□□□ -0.93
SMCO1-202ENST00000452776 NUB1Q9Y5A7 615 aa9.21□□□□□ -0.93
SMCO1-202ENST00000452776 TAF6LQ9Y6J9 622 aa9.21□□□□□ -0.93
SMCO1-202ENST00000452776 TSPOAP1O95153 1857 aa9.21□□□□□ -0.93
SMCO1-202ENST00000452776 POLR2DO15514 142 aaKnown RBP9.21□□□□□ -0.94
SMCO1-202ENST00000452776 HEXIM1O94992 359 aaKnown RBP9.21□□□□□ -0.94
SMCO1-202ENST00000452776 BMP15O95972 392 aa9.21□□□□□ -0.94
SMCO1-202ENST00000452776 SKIP12755 728 aa9.21□□□□□ -0.94
SMCO1-202ENST00000452776 RXRBP28702 533 aa9.21□□□□□ -0.94
SMCO1-202ENST00000452776 PDE6CP51160 858 aa9.21□□□□□ -0.94
SMCO1-202ENST00000452776 POLE2P56282 527 aa9.21□□□□□ -0.94
SMCO1-202ENST00000452776 ZBED6P86452 979 aa9.21□□□□□ -0.94
SMCO1-202ENST00000452776 UBXN1Q04323 297 aa9.21□□□□□ -0.94
SMCO1-202ENST00000452776 MYBPC3Q14896 1274 aa9.21□□□□□ -0.94
SMCO1-202ENST00000452776 CCDC92Q53HC0 331 aaPredicted RBP9.21□□□□□ -0.94
SMCO1-202ENST00000452776 RILPL1Q5EBL4 403 aa9.21□□□□□ -0.94
SMCO1-202ENST00000452776 TCP11X2Q5H9J9 407 aa9.21□□□□□ -0.94
SMCO1-202ENST00000452776 FIGNQ5HY92 759 aa9.21□□□□□ -0.94
SMCO1-202ENST00000452776 TMEM154Q6P9G4 183 aa9.21□□□□□ -0.94
SMCO1-202ENST00000452776 RAB11FIP4Q86YS3 637 aa9.21□□□□□ -0.94
SMCO1-202ENST00000452776 TRMT44Q8IYL2 757 aaKnown RBP9.21□□□□□ -0.94
SMCO1-202ENST00000452776 FBXO41Q8TF61 875 aa9.21□□□□□ -0.94
SMCO1-202ENST00000452776 IRGQQ8WZA9 623 aa9.21□□□□□ -0.94
SMCO1-202ENST00000452776 PPP2R3CQ969Q6 453 aa9.21□□□□□ -0.94
SMCO1-202ENST00000452776 MAML3Q96JK9 1138 aa9.21□□□□□ -0.94
SMCO1-202ENST00000452776 CHP1Q99653 195 aa9.21□□□□□ -0.94
SMCO1-202ENST00000452776 RMI1Q9H9A7 625 aa9.21□□□□□ -0.94
SMCO1-202ENST00000452776 NCOA5Q9HCD5 579 aaKnown RBP9.21□□□□□ -0.94
SMCO1-202ENST00000452776 CREBZFQ9NS37 354 aa9.21□□□□□ -0.94
SMCO1-202ENST00000452776 SERTAD1Q9UHV2 236 aa9.21□□□□□ -0.94
SMCO1-202ENST00000452776 SRPRBQ9Y5M8 271 aaKnown RBP9.21□□□□□ -0.94
SMCO1-202ENST00000452776 AGLP35573 1532 aa9.21□□□□□ -0.94
SMCO1-202ENST00000452776 MINK1Q8N4C8 1332 aaPredicted RBP9.2□□□□□ -0.94
SMCO1-202ENST00000452776 A0A1W2PQJ5 194 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms