RNA–Protein interactions for RNA: ENST00000450991.6

NECAP1-202, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 1 (best)

Gene NECAP1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-202ENST00000450991 TUBE1Q9UJT0 475 aa9.38□□□□□ -0.91
NECAP1-202ENST00000450991 A0A087X0B3 334 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 USP17L15C9J2P7 530 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 USP17L13C9JLJ4 530 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 USP17L11C9JVI0 530 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 USP17L18D6R9N7 530 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 USP17L22D6RA61 530 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 USP17L17D6RBQ6 530 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 USP17L19D6RCP7 530 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 USP17L20D6RJB6 530 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 LAD1O00515 517 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 PLA2G6O60733 806 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 PRPHP41219 470 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 USP17L24Q0WX57 530 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 USP17L6PQ6QN14 398 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 C11orf57Q6ZUT1 292 aaPredicted RBP9.37□□□□□ -0.91
NECAP1-202ENST00000450991 PNMA8AQ86V59 439 aaPredicted RBP9.37□□□□□ -0.91
NECAP1-202ENST00000450991 TBCKQ8TEA7 893 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 CHURC1Q8WUH1 139 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 ANP32BQ92688 251 aaKnown RBP9.37□□□□□ -0.91
NECAP1-202ENST00000450991 WDR18Q9BV38 432 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 AMNQ9BXJ7 453 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 PSTPIP2Q9H939 334 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 AS3MTQ9HBK9 375 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 SERTAD1Q9UHV2 236 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 SCN4AP35499 1836 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 A0A087WWV3 80 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 WDR46O15213 610 aaKnown RBP9.37□□□□□ -0.91
NECAP1-202ENST00000450991 FLOT1O75955 427 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 LONP1P36776 959 aaKnown RBP9.37□□□□□ -0.91
NECAP1-202ENST00000450991 MRPL12P52815 198 aaKnown RBP9.37□□□□□ -0.91
NECAP1-202ENST00000450991 NOL9Q5SY16 702 aaKnown RBP9.37□□□□□ -0.91
NECAP1-202ENST00000450991 CNNM3Q8NE01 707 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 ZNF592Q92610 1267 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 LPAR1Q92633 364 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 GLT8D2Q9H1C3 349 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 NMRK2Q9NPI5 230 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 ANO10Q9NW15 660 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 FEM1BQ9UK73 627 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 CSADQ9Y600 493 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 LOC285556D6RIA3 1793 aa9.37□□□□□ -0.91
NECAP1-202ENST00000450991 FOXN1O15353 648 aa9.36□□□□□ -0.91
NECAP1-202ENST00000450991 NF2P35240 595 aa9.36□□□□□ -0.91
NECAP1-202ENST00000450991 IREB2P48200 963 aaKnown RBP9.36□□□□□ -0.91
NECAP1-202ENST00000450991 ZNF165P49910 485 aa9.36□□□□□ -0.91
NECAP1-202ENST00000450991 NLRP12P59046 1061 aa9.36□□□□□ -0.91
NECAP1-202ENST00000450991 PNOCQ13519 176 aa9.36□□□□□ -0.91
NECAP1-202ENST00000450991 IQCB1Q15051 598 aa9.36□□□□□ -0.91
NECAP1-202ENST00000450991 LETM2Q2VYF4 491 aa9.36□□□□□ -0.91
NECAP1-202ENST00000450991 FAM160B2Q86V87 743 aa9.36□□□□□ -0.91
NECAP1-202ENST00000450991 TEX2Q8IWB9 1127 aa9.36□□□□□ -0.91
NECAP1-202ENST00000450991 OTUD5Q96G74 571 aa9.36□□□□□ -0.91
NECAP1-202ENST00000450991 WNK4Q96J92 1243 aa9.36□□□□□ -0.91
NECAP1-202ENST00000450991 SLF1Q9BQI6 1058 aa9.36□□□□□ -0.91
NECAP1-202ENST00000450991 AFG3L2Q9Y4W6 797 aa9.36□□□□□ -0.91
NECAP1-202ENST00000450991 CCNT1O60563 726 aaKnown RBP9.36□□□□□ -0.91
NECAP1-202ENST00000450991 HOXA13P31271 388 aaPredicted RBP9.36□□□□□ -0.91
NECAP1-202ENST00000450991 USP14P54578 494 aa9.36□□□□□ -0.91
NECAP1-202ENST00000450991 LUZP1Q86V48 1076 aa9.36□□□□□ -0.91
NECAP1-202ENST00000450991 CPXCR1Q8N123 301 aa9.36□□□□□ -0.91
NECAP1-202ENST00000450991 AGBL1Q96MI9 1066 aa9.36□□□□□ -0.91
NECAP1-202ENST00000450991 RANBP17Q9H2T7 1088 aaKnown RBP9.36□□□□□ -0.91
NECAP1-202ENST00000450991 OPLAHO14841 1288 aa9.35□□□□□ -0.91
NECAP1-202ENST00000450991 AP5Z1O43299 807 aa9.35□□□□□ -0.91
NECAP1-202ENST00000450991 NEMFO60524 1076 aa9.35□□□□□ -0.91
NECAP1-202ENST00000450991 OR52Z1P0C646 297 aa9.35□□□□□ -0.91
NECAP1-202ENST00000450991 E2F4Q16254 413 aa9.35□□□□□ -0.91
NECAP1-202ENST00000450991 KANK3Q6NY19 840 aa9.35□□□□□ -0.91
NECAP1-202ENST00000450991 DTHD1Q6ZMT9 781 aa9.35□□□□□ -0.91
NECAP1-202ENST00000450991 SH3RF1Q7Z6J0 888 aa9.35□□□□□ -0.91
NECAP1-202ENST00000450991 PDILTQ8N807 584 aa9.35□□□□□ -0.91
NECAP1-202ENST00000450991 TBC1D5Q92609 795 aa9.35□□□□□ -0.91
NECAP1-202ENST00000450991 P2RX7Q99572 595 aaKnown RBP9.35□□□□□ -0.91
NECAP1-202ENST00000450991 USP25Q9UHP3 1055 aa9.35□□□□□ -0.91
NECAP1-202ENST00000450991 MEIS2O14770 477 aa9.35□□□□□ -0.91
NECAP1-202ENST00000450991 IRF6O14896 467 aa9.35□□□□□ -0.91
NECAP1-202ENST00000450991 SLFN14P0C7P3 912 aa9.35□□□□□ -0.91
NECAP1-202ENST00000450991 PRR29P0C7W0 189 aa9.35□□□□□ -0.91
NECAP1-202ENST00000450991 CHRM1P11229 460 aaPredicted RBP9.35□□□□□ -0.91
NECAP1-202ENST00000450991 POSTNQ15063 836 aa9.35□□□□□ -0.91
NECAP1-202ENST00000450991 DPCR1Q3MIW9 517 aa9.35□□□□□ -0.91
NECAP1-202ENST00000450991 NT5DC1Q5TFE4 455 aa9.35□□□□□ -0.91
NECAP1-202ENST00000450991 LDHDQ86WU2 507 aa9.35□□□□□ -0.91
NECAP1-202ENST00000450991 DHX58Q96C10 678 aa9.35□□□□□ -0.91
NECAP1-202ENST00000450991 ATG4CQ96DT6 458 aa9.35□□□□□ -0.91
NECAP1-202ENST00000450991 MTMR9Q96QG7 549 aa9.35□□□□□ -0.91
NECAP1-202ENST00000450991 RAVER2Q9HCJ3 691 aaKnown RBP9.35□□□□□ -0.91
NECAP1-202ENST00000450991 HOMER2Q9NSB8 354 aa9.35□□□□□ -0.91
NECAP1-202ENST00000450991 HOOK1Q9UJC3 728 aaKnown RBP9.35□□□□□ -0.91
NECAP1-202ENST00000450991 SARSP49591 514 aaKnown RBP9.34□□□□□ -0.91
NECAP1-202ENST00000450991 TREML2Q5T2D2 321 aa9.34□□□□□ -0.91
NECAP1-202ENST00000450991 PPP4R3AQ6IN85 833 aa9.34□□□□□ -0.91
NECAP1-202ENST00000450991 PDXDC2PQ6P474 469 aa9.34□□□□□ -0.91
NECAP1-202ENST00000450991 DHX40Q8IX18 779 aaKnown RBP9.34□□□□□ -0.91
NECAP1-202ENST00000450991 GRAMD1CQ8IYS0 662 aa9.34□□□□□ -0.91
NECAP1-202ENST00000450991 ANKRD13AQ8IZ07 590 aa9.34□□□□□ -0.91
NECAP1-202ENST00000450991 PRPF38AQ8NAV1 312 aaKnown RBP9.34□□□□□ -0.91
NECAP1-202ENST00000450991 SPATA20Q8TB22 786 aa9.34□□□□□ -0.91
NECAP1-202ENST00000450991 CRYGNQ8WXF5 182 aa9.34□□□□□ -0.91
NECAP1-202ENST00000450991 UIMC1Q96RL1 719 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms