RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.04□□□□□ -0.483e-9■■□□□ 13
LINC01004-202ENST00000450686 TLK2Q86UE8 772 aa12.04□□□□□ -0.48
LINC01004-202ENST00000450686 STAG1Q8WVM7 1258 aa12.04□□□□□ -0.48
LINC01004-202ENST00000450686 TIFAQ96CG3 184 aa12.04□□□□□ -0.48
LINC01004-202ENST00000450686 PBX4Q9BYU1 374 aa12.04□□□□□ -0.48
LINC01004-202ENST00000450686 PRDM12Q9H4Q4 367 aa12.04□□□□□ -0.48
LINC01004-202ENST00000450686 ZNF576Q9H609 170 aa12.04□□□□□ -0.48
LINC01004-202ENST00000450686 ZNF287Q9HBT7 754 aa12.04□□□□□ -0.48
LINC01004-202ENST00000450686 FBXO40Q9UH90 709 aa12.04□□□□□ -0.48
LINC01004-202ENST00000450686 SCN5AQ14524 2016 aa12.04□□□□□ -0.48
LINC01004-202ENST00000450686 ELP1O95163 1332 aa12.04□□□□□ -0.48
LINC01004-202ENST00000450686 TTC41PQ6P2S7 1318 aa12.04□□□□□ -0.48
LINC01004-202ENST00000450686 XIRP2A4UGR9 3374 aa12.04□□□□□ -0.48
LINC01004-202ENST00000450686 BDP1A6H8Y1 2624 aa12.03□□□□□ -0.48
LINC01004-202ENST00000450686 A0A0D9SFI3 127 aa12.03□□□□□ -0.48
LINC01004-202ENST00000450686 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.03□□□□□ -0.48
LINC01004-202ENST00000450686 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.03□□□□□ -0.48
LINC01004-202ENST00000450686 DYNC1LI2O43237 492 aaPredicted RBP12.03□□□□□ -0.48
LINC01004-202ENST00000450686 OAZ1P54368 228 aa12.03□□□□□ -0.48
LINC01004-202ENST00000450686 FSCN1Q16658 493 aaKnown RBP12.03□□□□□ -0.48
LINC01004-202ENST00000450686 RRP12Q5JTH9 1297 aaKnown RBP12.03□□□□□ -0.48
LINC01004-202ENST00000450686 PCSK9Q8NBP7 692 aaKnown RBP12.03□□□□□ -0.48
LINC01004-202ENST00000450686 GMCL1Q96IK5 515 aa12.03□□□□□ -0.48
LINC01004-202ENST00000450686 FAM227BQ96M60 508 aa12.03□□□□□ -0.48
LINC01004-202ENST00000450686 SPC25Q9HBM1 224 aa12.03□□□□□ -0.48
LINC01004-202ENST00000450686 GPCPD1Q9NPB8 672 aa12.03□□□□□ -0.48
LINC01004-202ENST00000450686 TOMM22Q9NS69 142 aa12.03□□□□□ -0.48
LINC01004-202ENST00000450686 CCPG1Q9ULG6 757 aa12.03□□□□□ -0.48
LINC01004-202ENST00000450686 GNEQ9Y223 722 aaKnown RBP12.03□□□□□ -0.48
LINC01004-202ENST00000450686 SALL3Q9BXA9 1300 aa12.03□□□□□ -0.48
LINC01004-202ENST00000450686 NFIBO00712 420 aa12.02□□□□□ -0.49
LINC01004-202ENST00000450686 ERC2O15083 957 aa12.02□□□□□ -0.49
LINC01004-202ENST00000450686 CD4P01730 458 aa12.02□□□□□ -0.49
LINC01004-202ENST00000450686 SLC3A2P08195 630 aaKnown RBP12.02□□□□□ -0.49
LINC01004-202ENST00000450686 MYOGP15173 224 aa12.02□□□□□ -0.49
LINC01004-202ENST00000450686 RABGGTBP53611 331 aa12.02□□□□□ -0.49
LINC01004-202ENST00000450686 HAND2P61296 217 aa12.02□□□□□ -0.49
LINC01004-202ENST00000450686 PPIGQ13427 754 aaKnown RBP eCLIP12.02□□□□□ -0.49
LINC01004-202ENST00000450686 CCDC85BQ15834 202 aaPredicted RBP12.02□□□□□ -0.49
LINC01004-202ENST00000450686 RCSD1Q6JBY9 416 aa12.02□□□□□ -0.49
LINC01004-202ENST00000450686 TAPT1Q6NXT6 567 aa12.02□□□□□ -0.49
LINC01004-202ENST00000450686 FAM160B2Q86V87 743 aa12.02□□□□□ -0.49
LINC01004-202ENST00000450686 CHURC1Q8WUH1 139 aa12.02□□□□□ -0.49
LINC01004-202ENST00000450686 SCLYQ96I15 445 aa12.02□□□□□ -0.49
LINC01004-202ENST00000450686 CRBNQ96SW2 442 aa12.02□□□□□ -0.49
LINC01004-202ENST00000450686 WNT8AQ9H1J5 351 aa12.02□□□□□ -0.49
LINC01004-202ENST00000450686 NKX2-4Q9H2Z4 354 aa12.02□□□□□ -0.49
LINC01004-202ENST00000450686 CYP39A1Q9NYL5 469 aa12.02□□□□□ -0.49
LINC01004-202ENST00000450686 YBX2Q9Y2T7 364 aaKnown RBP12.02□□□□□ -0.49
LINC01004-202ENST00000450686 B4GALT4O60513 344 aa12.01□□□□□ -0.49
LINC01004-202ENST00000450686 ITGA7Q13683 1181 aa12.01□□□□□ -0.49
LINC01004-202ENST00000450686 BAATQ14032 418 aaPredicted RBP12.01□□□□□ -0.49
LINC01004-202ENST00000450686 ADGRE1Q14246 886 aa12.01□□□□□ -0.49
LINC01004-202ENST00000450686 ANKRD45Q5TZF3 282 aa12.01□□□□□ -0.49
LINC01004-202ENST00000450686 RASIP1Q5U651 963 aa12.01□□□□□ -0.49
LINC01004-202ENST00000450686 SLC30A10Q6XR72 485 aa12.01□□□□□ -0.49
LINC01004-202ENST00000450686 OTOP2Q7RTS6 562 aa12.01□□□□□ -0.49
LINC01004-202ENST00000450686 ZNF589Q86UQ0 364 aaPredicted RBP12.01□□□□□ -0.49
LINC01004-202ENST00000450686 VWCEQ96DN2 955 aa12.01□□□□□ -0.49
LINC01004-202ENST00000450686 AP5M1Q9H0R1 490 aa12.01□□□□□ -0.49
LINC01004-202ENST00000450686 CPVLQ9H3G5 476 aa12.01□□□□□ -0.49
LINC01004-202ENST00000450686 HIPK3Q9H422 1215 aa12.01□□□□□ -0.49
LINC01004-202ENST00000450686 MROH7Q68CQ1 1323 aa12.01□□□□□ -0.49
LINC01004-202ENST00000450686 ASB14A6NK59 587 aa12□□□□□ -0.49
LINC01004-202ENST00000450686 TLR3O15455 904 aaKnown RBP12□□□□□ -0.49
LINC01004-202ENST00000450686 CYP2C9P11712 490 aa12□□□□□ -0.49
LINC01004-202ENST00000450686 CALML3P27482 149 aa12□□□□□ -0.49
LINC01004-202ENST00000450686 LRRFIP1Q32MZ4 808 aaKnown RBP12□□□□□ -0.49
LINC01004-202ENST00000450686 SYDE2Q5VT97 1194 aa12□□□□□ -0.49
LINC01004-202ENST00000450686 KIAA1211Q6ZU35 1233 aa12□□□□□ -0.49
LINC01004-202ENST00000450686 TMEM199Q8N511 208 aa12□□□□□ -0.49
LINC01004-202ENST00000450686 SLC43A3Q8NBI5 491 aa12□□□□□ -0.49
LINC01004-202ENST00000450686 COPS5Q92905 334 aa12□□□□□ -0.49
LINC01004-202ENST00000450686 TMEM47Q9BQJ4 181 aa12□□□□□ -0.49
LINC01004-202ENST00000450686 NOC4LQ9BVI4 516 aaKnown RBP12□□□□□ -0.49
LINC01004-202ENST00000450686 IL23AQ9NPF7 189 aa12□□□□□ -0.49
LINC01004-202ENST00000450686 TRMT13Q9NUP7 481 aaKnown RBP12□□□□□ -0.49
LINC01004-202ENST00000450686 SYNPO2Q9UMS6 1093 aa12□□□□□ -0.49
LINC01004-202ENST00000450686 NCOR1O75376 2440 aa12□□□□□ -0.49
LINC01004-202ENST00000450686 TMEM265A0A087WTH1 108 aa11.99□□□□□ -0.49
LINC01004-202ENST00000450686 PTPDC1A2A3K4 754 aa11.99□□□□□ -0.49
LINC01004-202ENST00000450686 ICAM1P05362 532 aa11.99□□□□□ -0.49
LINC01004-202ENST00000450686 MYL3P08590 195 aa11.99□□□□□ -0.49
LINC01004-202ENST00000450686 ALDH5A1P51649 535 aaPredicted RBP11.99□□□□□ -0.49
LINC01004-202ENST00000450686 NMIQ13287 307 aaPredicted RBP11.99□□□□□ -0.49
LINC01004-202ENST00000450686 PSRC1Q6PGN9 363 aaPredicted RBP11.99□□□□□ -0.49
LINC01004-202ENST00000450686 TBC1D10CQ8IV04 446 aa11.99□□□□□ -0.49
LINC01004-202ENST00000450686 BBXQ8WY36 941 aaPredicted RBP11.99□□□□□ -0.49
LINC01004-202ENST00000450686 ZKSCAN3Q9BRR0 538 aa11.99□□□□□ -0.49
LINC01004-202ENST00000450686 RANBP17Q9H2T7 1088 aaKnown RBP11.99□□□□□ -0.49
LINC01004-202ENST00000450686 TET1Q8NFU7 2136 aa11.98□□□□□ -0.49
LINC01004-202ENST00000450686 TCF20Q9UGU0 1960 aaKnown RBP11.98□□□□□ -0.49
LINC01004-202ENST00000450686 ORC4O43929 436 aa11.98□□□□□ -0.49
LINC01004-202ENST00000450686 PLA2G6O60733 806 aa11.98□□□□□ -0.49
LINC01004-202ENST00000450686 FGAP02671 866 aa11.98□□□□□ -0.49
LINC01004-202ENST00000450686 GOLGA8HP0CJ92 632 aa11.98□□□□□ -0.49
LINC01004-202ENST00000450686 FDX1P10109 184 aa11.98□□□□□ -0.49
LINC01004-202ENST00000450686 IGFBP4P22692 258 aa11.98□□□□□ -0.49
LINC01004-202ENST00000450686 PDE1AP54750 535 aa11.98□□□□□ -0.49
LINC01004-202ENST00000450686 RRP1P56182 461 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms