RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 VTI1AQ96AJ9 217 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 PSMD1Q99460 953 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 ISCA1Q9BUE6 129 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 FAM204AQ9H8W3 233 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 PDE11AQ9HCR9 933 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 RIC8AQ9NPQ8 531 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 SRP68Q9UHB9 627 aaKnown RBP11.44□□□□□ -0.58
CTC1-202ENST00000449476 FEZ2Q9UHY8 353 aaPredicted RBP11.44□□□□□ -0.58
CTC1-202ENST00000449476 SEC31AO94979 1220 aaKnown RBP11.44□□□□□ -0.58
CTC1-202ENST00000449476 GCFC2P16383 781 aaKnown RBP11.44□□□□□ -0.58
CTC1-202ENST00000449476 XKR9Q5GH70 373 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 FAM102BQ5T8I3 360 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 ARL6IP4Q66PJ3 421 aaKnown RBP11.44□□□□□ -0.58
CTC1-202ENST00000449476 SPICE1Q8N0Z3 855 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 KCNG1Q9UIX4 513 aa11.44□□□□□ -0.58
CTC1-202ENST00000449476 NBPF26B4DH59 902 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 PLCG1P19174 1290 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 ODR4Q5SWX8 454 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 DENND2CQ68D51 928 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 NBPF10Q6P3W6 841 aaKnown RBP11.43□□□□□ -0.58
CTC1-202ENST00000449476 CLEC4GQ6UXB4 293 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 TMTC3Q6ZXV5 915 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 POTEDQ86YR6 584 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 NBPF15Q8N660 670 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 CCDC127Q96BQ5 260 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 TEKT3Q9BXF9 490 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 TRIM7Q9C029 511 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 ALDH8A1Q9H2A2 487 aaPredicted RBP11.43□□□□□ -0.58
CTC1-202ENST00000449476 MED4Q9NPJ6 270 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 E7EVH7 732 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 PPM1KQ8N3J5 372 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 FLAD1Q8NFF5 587 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 WDR19Q8NEZ3 1342 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 HGSO14964 777 aaPredicted RBP11.43□□□□□ -0.58
CTC1-202ENST00000449476 FOXO4P98177 505 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 CACNB1Q02641 598 aaPredicted RBP11.43□□□□□ -0.58
CTC1-202ENST00000449476 PPP2R5EQ16537 467 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 CDAN1Q8IWY9 1227 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 CEP63Q96MT8 703 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.43□□□□□ -0.58
CTC1-202ENST00000449476 PPEF1O14829 653 aaPredicted RBP11.43□□□□□ -0.58
CTC1-202ENST00000449476 GNGT1P63211 74 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 LACTBP83111 547 aaPredicted RBP11.43□□□□□ -0.58
CTC1-202ENST00000449476 ZBED6P86452 979 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 SF3A3Q12874 501 aaKnown RBP eCLIP11.43□□□□□ -0.585e-6■■■□□ 17
CTC1-202ENST00000449476 TNFAIP1Q13829 316 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 RABL6Q3YEC7 729 aaPredicted RBP11.43□□□□□ -0.58
CTC1-202ENST00000449476 ARMCX5Q6P1M9 558 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 APBB1IPQ7Z5R6 666 aaPredicted RBP11.43□□□□□ -0.58
CTC1-202ENST00000449476 MAIP1Q8WWC4 291 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 DPH5Q9H2P9 285 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 KANSL2Q9H9L4 492 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 LMTK2Q8IWU2 1503 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 CEP152O94986 1710 aa11.43□□□□□ -0.58
CTC1-202ENST00000449476 PALLDQ8WX93 1383 aa11.42□□□□□ -0.58
CTC1-202ENST00000449476 CDHR2Q9BYE9 1310 aa11.42□□□□□ -0.58
CTC1-202ENST00000449476 STK36Q9NRP7 1315 aa11.42□□□□□ -0.58
CTC1-202ENST00000449476 POLR1AO95602 1720 aaPredicted RBP11.42□□□□□ -0.58
CTC1-202ENST00000449476 KRT19P08727 400 aa11.42□□□□□ -0.58
CTC1-202ENST00000449476 PRDX5P30044 214 aa11.42□□□□□ -0.58
CTC1-202ENST00000449476 GUCY2DQ02846 1103 aa11.42□□□□□ -0.58
CTC1-202ENST00000449476 SCARF1Q14162 830 aa11.42□□□□□ -0.58
CTC1-202ENST00000449476 LRCH2Q5VUJ6 765 aa11.42□□□□□ -0.58
CTC1-202ENST00000449476 STOX1Q6ZVD7 989 aa11.42□□□□□ -0.58
CTC1-202ENST00000449476 ADAT2Q7Z6V5 191 aaKnown RBP11.42□□□□□ -0.58
CTC1-202ENST00000449476 DEPTORQ8TB45 409 aa11.42□□□□□ -0.58
CTC1-202ENST00000449476 PANX2Q96RD6 677 aa11.42□□□□□ -0.58
CTC1-202ENST00000449476 PPANQ9NQ55 473 aaKnown RBP11.42□□□□□ -0.58
CTC1-202ENST00000449476 hCG_1984214I3L0E3 225 aa11.42□□□□□ -0.58
CTC1-202ENST00000449476 N4BP1O75113 896 aaKnown RBP11.42□□□□□ -0.58
CTC1-202ENST00000449476 CDC27P30260 824 aa11.42□□□□□ -0.58
CTC1-202ENST00000449476 ARHGAP25P42331 645 aa11.42□□□□□ -0.58
CTC1-202ENST00000449476 IRX5P78411 483 aaPredicted RBP11.42□□□□□ -0.58
CTC1-202ENST00000449476 KRT26Q7Z3Y9 468 aa11.42□□□□□ -0.58
CTC1-202ENST00000449476 ZNF713Q8N859 430 aaPredicted RBP11.42□□□□□ -0.58
CTC1-202ENST00000449476 SMCR8Q8TEV9 937 aaPredicted RBP11.42□□□□□ -0.58
CTC1-202ENST00000449476 CNKSR1Q969H4 720 aa11.42□□□□□ -0.58
CTC1-202ENST00000449476 PARP2Q9UGN5 583 aa11.42□□□□□ -0.58
CTC1-202ENST00000449476 ATP8B1O43520 1251 aa11.42□□□□□ -0.58
CTC1-202ENST00000449476 ATP1A2P50993 1020 aa11.42□□□□□ -0.58
CTC1-202ENST00000449476 KRT31Q15323 416 aa11.42□□□□□ -0.58
CTC1-202ENST00000449476 GNPTABQ3T906 1256 aa11.42□□□□□ -0.58
CTC1-202ENST00000449476 KMT5BQ4FZB7 885 aa11.42□□□□□ -0.58
CTC1-202ENST00000449476 ARHGEF16Q5VV41 709 aa11.42□□□□□ -0.58
CTC1-202ENST00000449476 FAM71BQ8TC56 605 aa11.42□□□□□ -0.58
CTC1-202ENST00000449476 LY9Q9HBG7 655 aa11.42□□□□□ -0.58
CTC1-202ENST00000449476 DISC1Q9NRI5 854 aa11.42□□□□□ -0.58
CTC1-202ENST00000449476 USP42Q9H9J4 1324 aaKnown RBP11.42□□□□□ -0.58
CTC1-202ENST00000449476 RGS16O15492 202 aaPredicted RBP11.41□□□□□ -0.58
CTC1-202ENST00000449476 NDUFA10O95299 355 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 CDK8P49336 464 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 SLC8A3P57103 927 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 PPM1EQ8WY54 764 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 CSRNP1Q96S65 589 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 PLCB1Q9NQ66 1216 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 FAM184BQ9ULE4 1060 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 GDAQ9Y2T3 454 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 BZW2Q9Y6E2 419 aaKnown RBP11.41□□□□□ -0.58
CTC1-202ENST00000449476 PTPRMP28827 1452 aa11.41□□□□□ -0.58
CTC1-202ENST00000449476 CCDC151A5D8V7 595 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms