RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 CCDC69A6NI79 296 aa29.12■■■□□ 2.25
HTATSF1-203ENST00000448450 SMAD3P84022 425 aaKnown RBP29.12■■■□□ 2.25
HTATSF1-203ENST00000448450 BAATQ14032 418 aaPredicted RBP29.12■■■□□ 2.25
HTATSF1-203ENST00000448450 CLEC4DQ8WXI8 215 aa29.12■■■□□ 2.25
HTATSF1-203ENST00000448450 TCEANC2Q96MN5 208 aa29.12■■■□□ 2.25
HTATSF1-203ENST00000448450 PURBQ96QR8 312 aaKnown RBP29.12■■■□□ 2.25
HTATSF1-203ENST00000448450 CDX2Q99626 313 aaPredicted RBP29.12■■■□□ 2.25
HTATSF1-203ENST00000448450 WDR19Q8NEZ3 1342 aa29.12■■■□□ 2.25
HTATSF1-203ENST00000448450 BAZ2BQ9UIF8 2168 aaKnown RBP29.11■■■□□ 2.25
HTATSF1-203ENST00000448450 PTPDC1A2A3K4 754 aa29.11■■■□□ 2.25
HTATSF1-203ENST00000448450 SNAI1O95863 264 aaPredicted RBP29.11■■■□□ 2.25
HTATSF1-203ENST00000448450 KRT32Q14532 448 aa29.11■■■□□ 2.25
HTATSF1-203ENST00000448450 MAMDC4Q6UXC1 1216 aa29.11■■■□□ 2.25
HTATSF1-203ENST00000448450 ZNF467Q7Z7K2 595 aaPredicted RBP29.11■■■□□ 2.25
HTATSF1-203ENST00000448450 TMTC2Q8N394 836 aa29.11■■■□□ 2.25
HTATSF1-203ENST00000448450 MSL3Q8N5Y2 521 aaKnown RBP29.11■■■□□ 2.25
HTATSF1-203ENST00000448450 CNPY2Q9Y2B0 182 aa29.11■■■□□ 2.25
HTATSF1-203ENST00000448450 MYH6P13533 1939 aa29.1■■■□□ 2.25
HTATSF1-203ENST00000448450 MCM3APO60318 1980 aa29.1■■■□□ 2.25
HTATSF1-203ENST00000448450 PGK1P00558 417 aa29.1■■■□□ 2.25
HTATSF1-203ENST00000448450 CLTBP09497 229 aa29.1■■■□□ 2.25
HTATSF1-203ENST00000448450 AKR1A1P14550 325 aa29.1■■■□□ 2.25
HTATSF1-203ENST00000448450 HSPA4P34932 840 aa29.1■■■□□ 2.25
HTATSF1-203ENST00000448450 FBXO11Q86XK2 927 aa29.1■■■□□ 2.25
HTATSF1-203ENST00000448450 RAB11FIP4Q86YS3 637 aa29.1■■■□□ 2.25
HTATSF1-203ENST00000448450 SEMA6BQ9H3T3 888 aa29.1■■■□□ 2.25
HTATSF1-203ENST00000448450 LIFRP42702 1097 aa29.09■■■□□ 2.25
HTATSF1-203ENST00000448450 EXOSC10Q01780 885 aaKnown RBP29.09■■■□□ 2.25
HTATSF1-203ENST00000448450 SLC35G1Q2M3R5 365 aa29.09■■■□□ 2.25
HTATSF1-203ENST00000448450 DHX32Q7L7V1 743 aaKnown RBP29.09■■■□□ 2.25
HTATSF1-203ENST00000448450 CCDC144CPQ8IYA2 1237 aa29.09■■■□□ 2.25
HTATSF1-203ENST00000448450 CDKN2AIPQ9NXV6 580 aaPredicted RBP29.09■■■□□ 2.25
HTATSF1-203ENST00000448450 SNX14Q9Y5W7 946 aa29.09■■■□□ 2.25
HTATSF1-203ENST00000448450 DDX49Q9Y6V7 483 aaKnown RBP29.09■■■□□ 2.25
HTATSF1-203ENST00000448450 SYNGAP1Q96PV0 1343 aa29.09■■■□□ 2.25
HTATSF1-203ENST00000448450 A0A1W2PQ45 241 aaPredicted RBP29.08■■■□□ 2.25
HTATSF1-203ENST00000448450 A0A1W2PQY0 241 aa29.08■■■□□ 2.25
HTATSF1-203ENST00000448450 ZNF865P0CJ78 1059 aaPredicted RBP29.08■■■□□ 2.25
HTATSF1-203ENST00000448450 CPA1P15085 419 aa29.08■■■□□ 2.25
HTATSF1-203ENST00000448450 RXRAP19793 462 aa29.08■■■□□ 2.25
HTATSF1-203ENST00000448450 CALML3P27482 149 aa29.08■■■□□ 2.25
HTATSF1-203ENST00000448450 RNF207Q6ZRF8 634 aa29.08■■■□□ 2.25
HTATSF1-203ENST00000448450 ARMCX2Q7L311 632 aa29.08■■■□□ 2.25
HTATSF1-203ENST00000448450 HOMER1Q86YM7 354 aa29.08■■■□□ 2.25
HTATSF1-203ENST00000448450 MAFAQ8NHW3 353 aaPredicted RBP29.08■■■□□ 2.25
HTATSF1-203ENST00000448450 CTCFLQ8NI51 663 aaPredicted RBP29.08■■■□□ 2.25
HTATSF1-203ENST00000448450 KCNB2Q92953 911 aa29.08■■■□□ 2.25
HTATSF1-203ENST00000448450 ZHX1Q9UKY1 873 aaPredicted RBP29.08■■■□□ 2.25
HTATSF1-203ENST00000448450 PQBP1O60828 265 aaKnown RBP29.07■■■□□ 2.24
HTATSF1-203ENST00000448450 DDAH1O94760 285 aa29.07■■■□□ 2.24
HTATSF1-203ENST00000448450 SLC30A10Q6XR72 485 aa29.07■■■□□ 2.24
HTATSF1-203ENST00000448450 PIBF1Q8WXW3 757 aa29.07■■■□□ 2.24
HTATSF1-203ENST00000448450 JAKMIP1Q96N16 626 aaKnown RBP29.07■■■□□ 2.24
HTATSF1-203ENST00000448450 PIGSQ96S52 555 aa29.07■■■□□ 2.24
HTATSF1-203ENST00000448450 SLC12A7Q9Y666 1083 aa29.07■■■□□ 2.24
HTATSF1-203ENST00000448450 ASTN1O14525 1302 aa29.06■■■□□ 2.24
HTATSF1-203ENST00000448450 ABCB11O95342 1321 aa29.06■■■□□ 2.24
HTATSF1-203ENST00000448450 RAG1P15918 1043 aa29.06■■■□□ 2.24
HTATSF1-203ENST00000448450 TBC1D5Q92609 795 aa29.06■■■□□ 2.24
HTATSF1-203ENST00000448450 MTMR8Q96EF0 704 aa29.06■■■□□ 2.24
HTATSF1-203ENST00000448450 RNPC3Q96LT9 517 aaKnown RBP29.06■■■□□ 2.24
HTATSF1-203ENST00000448450 RIOX1Q9H6W3 641 aa29.06■■■□□ 2.24
HTATSF1-203ENST00000448450 ZBTB5O15062 677 aa29.05■■■□□ 2.24
HTATSF1-203ENST00000448450 KIAA0355O15063 1070 aa29.05■■■□□ 2.24
HTATSF1-203ENST00000448450 CYTH3O43739 400 aa29.05■■■□□ 2.24
HTATSF1-203ENST00000448450 KIF5BP33176 963 aa29.05■■■□□ 2.24
HTATSF1-203ENST00000448450 RPS6P62753 249 aaKnown RBP29.05■■■□□ 2.24
HTATSF1-203ENST00000448450 ACVR2BQ13705 512 aa29.05■■■□□ 2.24
HTATSF1-203ENST00000448450 MAP3K14Q99558 947 aa29.05■■■□□ 2.24
HTATSF1-203ENST00000448450 AMNQ9BXJ7 453 aa29.05■■■□□ 2.24
HTATSF1-203ENST00000448450 USP26Q9BXU7 913 aa29.05■■■□□ 2.24
HTATSF1-203ENST00000448450 TTYH1Q9H313 450 aaPredicted RBP29.05■■■□□ 2.24
HTATSF1-203ENST00000448450 ASB14A6NK59 587 aa29.04■■■□□ 2.24
HTATSF1-203ENST00000448450 PPP1R11O60927 126 aaPredicted RBP29.04■■■□□ 2.24
HTATSF1-203ENST00000448450 MYLIPQ8WY64 445 aa29.04■■■□□ 2.24
HTATSF1-203ENST00000448450 LENG1Q96BZ8 264 aaPredicted RBP29.04■■■□□ 2.24
HTATSF1-203ENST00000448450 TSEN34Q9BSV6 310 aaKnown RBP29.04■■■□□ 2.24
HTATSF1-203ENST00000448450 ABHD16BQ9H3Z7 469 aa29.04■■■□□ 2.24
HTATSF1-203ENST00000448450 MRPL11Q9Y3B7 192 aaKnown RBP29.04■■■□□ 2.24
HTATSF1-203ENST00000448450 LCTP09848 1927 aa29.04■■■□□ 2.24
HTATSF1-203ENST00000448450 TMEM265A0A087WTH1 108 aa29.03■■■□□ 2.24
HTATSF1-203ENST00000448450 ADAMTS4O75173 837 aa29.03■■■□□ 2.24
HTATSF1-203ENST00000448450 HMGB1P09429 215 aaKnown RBP29.03■■■□□ 2.24
HTATSF1-203ENST00000448450 ITGB8P26012 769 aa29.03■■■□□ 2.24
HTATSF1-203ENST00000448450 FPGSQ05932 587 aa29.03■■■□□ 2.24
HTATSF1-203ENST00000448450 SYNE3Q6ZMZ3 975 aa29.03■■■□□ 2.24
HTATSF1-203ENST00000448450 SGMS1Q86VZ5 419 aa29.03■■■□□ 2.24
HTATSF1-203ENST00000448450 TMEM39AQ9NV64 488 aa29.03■■■□□ 2.24
HTATSF1-203ENST00000448450 FAM184BQ9ULE4 1060 aa29.03■■■□□ 2.24
HTATSF1-203ENST00000448450 SYNRGQ9UMZ2 1314 aa29.02■■■□□ 2.24
HTATSF1-203ENST00000448450 CALM1P0DP23 149 aa29.02■■■□□ 2.24
HTATSF1-203ENST00000448450 CALM2P0DP24 149 aa29.02■■■□□ 2.24
HTATSF1-203ENST00000448450 CALM3P0DP25 149 aa29.02■■■□□ 2.24
HTATSF1-203ENST00000448450 ACLYP53396 1101 aa29.02■■■□□ 2.24
HTATSF1-203ENST00000448450 FGD1P98174 961 aa29.02■■■□□ 2.24
HTATSF1-203ENST00000448450 MICU3Q86XE3 530 aa29.02■■■□□ 2.24
HTATSF1-203ENST00000448450 CMTR1Q8N1G2 835 aaKnown RBP29.02■■■□□ 2.24
HTATSF1-203ENST00000448450 STARD7Q9NQZ5 370 aa29.02■■■□□ 2.24
HTATSF1-203ENST00000448450 ADD3Q9UEY8 706 aaKnown RBP29.02■■■□□ 2.24
HTATSF1-203ENST00000448450 PCDHA1Q9Y5I3 950 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms