RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 PLS1Q14651 629 aa28.31■■■□□ 2.12
RFFL-206ENST00000447669 USP49Q70CQ1 688 aa28.31■■■□□ 2.12
RFFL-206ENST00000447669 PROCA1Q8NCQ7 364 aaPredicted RBP28.31■■■□□ 2.12
RFFL-206ENST00000447669 CSRNP2Q9H175 543 aa28.31■■■□□ 2.12
RFFL-206ENST00000447669 ZNF214Q9UL59 606 aaPredicted RBP28.31■■■□□ 2.12
RFFL-206ENST00000447669 SNW1Q13573 536 aaKnown RBP28.31■■■□□ 2.12
RFFL-206ENST00000447669 CAMK4Q16566 473 aa28.31■■■□□ 2.12
RFFL-206ENST00000447669 ZSCAN23Q3MJ62 389 aa28.31■■■□□ 2.12
RFFL-206ENST00000447669 GLT8D2Q9H1C3 349 aa28.31■■■□□ 2.12
RFFL-206ENST00000447669 HOXC10Q9NYD6 342 aa28.31■■■□□ 2.12
RFFL-206ENST00000447669 SRPRBQ9Y5M8 271 aaKnown RBP28.31■■■□□ 2.12
RFFL-206ENST00000447669 VWA3AA6NCI4 1184 aa28.3■■■□□ 2.12
RFFL-206ENST00000447669 SLC37A4O43826 429 aa28.3■■■□□ 2.12
RFFL-206ENST00000447669 UBXN2AP68543 259 aa28.3■■■□□ 2.12
RFFL-206ENST00000447669 SNRNP48Q6IEG0 339 aaKnown RBP28.3■■■□□ 2.12
RFFL-206ENST00000447669 MRPS27Q92552 414 aaKnown RBP28.3■■■□□ 2.12
RFFL-206ENST00000447669 TRPM7Q96QT4 1865 aa28.3■■■□□ 2.12
RFFL-206ENST00000447669 A0A1W2PQ27 194 aa28.3■■■□□ 2.12
RFFL-206ENST00000447669 A0A1W2PQ64 194 aa28.3■■■□□ 2.12
RFFL-206ENST00000447669 A0A1W2PQD8 194 aa28.3■■■□□ 2.12
RFFL-206ENST00000447669 GCOM1H8Y6P7 765 aaPredicted RBP28.3■■■□□ 2.12
RFFL-206ENST00000447669 CUTAO60888 179 aa28.3■■■□□ 2.12
RFFL-206ENST00000447669 POLR2MP0CAP2 368 aa28.3■■■□□ 2.12
RFFL-206ENST00000447669 FKBP1BP68106 108 aa28.3■■■□□ 2.12
RFFL-206ENST00000447669 GPAT2Q6NUI2 795 aa28.3■■■□□ 2.12
RFFL-206ENST00000447669 POTEDQ86YR6 584 aa28.3■■■□□ 2.12
RFFL-206ENST00000447669 TRERF1Q96PN7 1200 aa28.3■■■□□ 2.12
RFFL-206ENST00000447669 ASCC2Q9H1I8 757 aaPredicted RBP28.3■■■□□ 2.12
RFFL-206ENST00000447669 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.29■■■□□ 2.12
RFFL-206ENST00000447669 SPDYE3A6NKU9 549 aa28.29■■■□□ 2.12
RFFL-206ENST00000447669 ENGASEQ8NFI3 743 aa28.29■■■□□ 2.12
RFFL-206ENST00000447669 GJA10Q969M2 543 aa28.29■■■□□ 2.12
RFFL-206ENST00000447669 ZFP91Q96JP5 570 aaPredicted RBP28.29■■■□□ 2.12
RFFL-206ENST00000447669 COL20A1Q9P218 1284 aa28.29■■■□□ 2.12
RFFL-206ENST00000447669 AGTPBP1Q9UPW5 1226 aa28.29■■■□□ 2.12
RFFL-206ENST00000447669 PIK3CDO00329 1044 aa28.28■■■□□ 2.12
RFFL-206ENST00000447669 PFKFB1P16118 471 aa28.28■■■□□ 2.12
RFFL-206ENST00000447669 HOXA7P31268 230 aaPredicted RBP28.28■■■□□ 2.12
RFFL-206ENST00000447669 BTBD7Q9P203 1132 aa28.28■■■□□ 2.12
RFFL-206ENST00000447669 CMA1P23946 247 aa28.28■■■□□ 2.12
RFFL-206ENST00000447669 HUNKP57058 714 aa28.28■■■□□ 2.12
RFFL-206ENST00000447669 TRAF1Q13077 416 aa28.28■■■□□ 2.12
RFFL-206ENST00000447669 SNAPC2Q13487 334 aa28.28■■■□□ 2.12
RFFL-206ENST00000447669 PURBQ96QR8 312 aaKnown RBP28.28■■■□□ 2.12
RFFL-206ENST00000447669 PANK2Q9BZ23 570 aa28.28■■■□□ 2.12
RFFL-206ENST00000447669 SYCE3A1L190 88 aa28.27■■■□□ 2.12
RFFL-206ENST00000447669 KIF3CO14782 793 aa28.27■■■□□ 2.12
RFFL-206ENST00000447669 IRX3P78415 501 aaPredicted RBP28.27■■■□□ 2.12
RFFL-206ENST00000447669 AP3B2Q13367 1082 aa28.27■■■□□ 2.12
RFFL-206ENST00000447669 RESP18Q5W5W9 173 aa28.27■■■□□ 2.12
RFFL-206ENST00000447669 CCDC73Q6ZRK6 1079 aa28.27■■■□□ 2.12
RFFL-206ENST00000447669 EPSTI1Q96J88 318 aa28.27■■■□□ 2.12
RFFL-206ENST00000447669 MS4A4AQ96JQ5 239 aa28.27■■■□□ 2.12
RFFL-206ENST00000447669 ARHGAP4P98171 946 aa28.26■■■□□ 2.12
RFFL-206ENST00000447669 RNF146Q9NTX7 359 aa28.26■■■□□ 2.12
RFFL-206ENST00000447669 NEMFO60524 1076 aa28.26■■■□□ 2.11
RFFL-206ENST00000447669 BMP15O95972 392 aa28.26■■■□□ 2.11
RFFL-206ENST00000447669 CDC25AP30304 524 aa28.26■■■□□ 2.11
RFFL-206ENST00000447669 FMR1NBQ8N0W7 255 aaPredicted RBP28.26■■■□□ 2.11
RFFL-206ENST00000447669 CRYGNQ8WXF5 182 aa28.25■■■□□ 2.11
RFFL-206ENST00000447669 PAGR1Q9BTK6 254 aa28.25■■■□□ 2.11
RFFL-206ENST00000447669 R3HDMLQ9H3Y0 253 aa28.25■■■□□ 2.11
RFFL-206ENST00000447669 FDX1P10109 184 aa28.25■■■□□ 2.11
RFFL-206ENST00000447669 FAM160A1Q05DH4 1040 aa28.25■■■□□ 2.11
RFFL-206ENST00000447669 CCDC183Q5T5S1 534 aa28.25■■■□□ 2.11
RFFL-206ENST00000447669 NSMFQ6X4W1 530 aa28.25■■■□□ 2.11
RFFL-206ENST00000447669 SLC30A10Q6XR72 485 aa28.25■■■□□ 2.11
RFFL-206ENST00000447669 LBX2Q6XYB7 198 aa28.25■■■□□ 2.11
RFFL-206ENST00000447669 FASTKD5Q7L8L6 764 aaKnown RBP28.25■■■□□ 2.11
RFFL-206ENST00000447669 CYP2W1Q8TAV3 490 aa28.25■■■□□ 2.11
RFFL-206ENST00000447669 CYP2C8P10632 490 aa28.24■■■□□ 2.11
RFFL-206ENST00000447669 STAT3P40763 770 aa28.24■■■□□ 2.11
RFFL-206ENST00000447669 HSD17B4P51659 736 aa28.24■■■□□ 2.11
RFFL-206ENST00000447669 HERVK_113P62684 666 aa28.24■■■□□ 2.11
RFFL-206ENST00000447669 UNCXA6NJT0 531 aa28.23■■■□□ 2.11
RFFL-206ENST00000447669 RPS6P62753 249 aaKnown RBP28.23■■■□□ 2.11
RFFL-206ENST00000447669 SPRYD7Q5W111 196 aa28.23■■■□□ 2.11
RFFL-206ENST00000447669 TEX13BQ9BXU2 312 aa28.23■■■□□ 2.11
RFFL-206ENST00000447669 TXNRD2Q9NNW7 524 aa28.23■■■□□ 2.11
RFFL-206ENST00000447669 DDX25Q9UHL0 483 aaKnown RBP28.23■■■□□ 2.11
RFFL-206ENST00000447669 MYPNQ86TC9 1320 aa28.23■■■□□ 2.11
RFFL-206ENST00000447669 CCL15-CCL14A0A0B4J2E2 113 aa28.23■■■□□ 2.11
RFFL-206ENST00000447669 FOSP01100 380 aaPredicted RBP28.23■■■□□ 2.11
RFFL-206ENST00000447669 SREBF1P36956 1147 aa28.23■■■□□ 2.11
RFFL-206ENST00000447669 CCL15Q16663 113 aa28.23■■■□□ 2.11
RFFL-206ENST00000447669 PDILTQ8N807 584 aa28.23■■■□□ 2.11
RFFL-206ENST00000447669 BRI3BPQ8WY22 251 aa28.23■■■□□ 2.11
RFFL-206ENST00000447669 SYMPKQ92797 1274 aaKnown RBP28.23■■■□□ 2.11
RFFL-206ENST00000447669 ERCC4Q92889 916 aaPredicted RBP28.23■■■□□ 2.11
RFFL-206ENST00000447669 FERMT2Q96AC1 680 aa28.23■■■□□ 2.11
RFFL-206ENST00000447669 HPSEQ9Y251 543 aa28.23■■■□□ 2.11
RFFL-206ENST00000447669 PP2D1A8MPX8 630 aa28.22■■■□□ 2.11
RFFL-206ENST00000447669 OR52Z1P0C646 297 aa28.22■■■□□ 2.11
RFFL-206ENST00000447669 PASKQ96RG2 1323 aa28.22■■■□□ 2.11
RFFL-206ENST00000447669 FAM86B1E9PN63 330 aa28.21■■■□□ 2.11
RFFL-206ENST00000447669 ZNF202O95125 648 aa28.21■■■□□ 2.11
RFFL-206ENST00000447669 FAM86B2P0C5J1 330 aa28.21■■■□□ 2.11
RFFL-206ENST00000447669 TXKP42681 527 aa28.21■■■□□ 2.11
RFFL-206ENST00000447669 CALCRLQ16602 461 aa28.21■■■□□ 2.11
RFFL-206ENST00000447669 CKAP2LQ8IYA6 745 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms