RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 ZNF543Q08ER8 600 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 SMC1AQ14683 1233 aaKnown RBP6.7□□□□□ -1.34
PROM1-201ENST00000447510 COG2Q14746 738 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 GRM4Q14833 912 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 SF3A1Q15459 793 aaKnown RBP6.7□□□□□ -1.34
PROM1-201ENST00000447510 ISM2Q6H9L7 571 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 FBXO11Q86XK2 927 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 MICALL1Q8N3F8 863 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 PRPF38AQ8NAV1 312 aaKnown RBP6.7□□□□□ -1.34
PROM1-201ENST00000447510 NCAPGQ9BPX3 1015 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 FBXO28Q9NVF7 368 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 TACC3Q9Y6A5 838 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 BRCA1P38398 1863 aaKnown RBP6.7□□□□□ -1.34
PROM1-201ENST00000447510 LTBP1Q14766 1721 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 GOLGB1Q14789 3259 aaKnown RBP6.7□□□□□ -1.34
PROM1-201ENST00000447510 ITGBL1O95965 494 aaPredicted RBP6.7□□□□□ -1.34
PROM1-201ENST00000447510 PDHBP11177 359 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 VCAM1P19320 739 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 PLA2G4AP47712 749 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 SEC23AQ15436 765 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 WDR18Q9BV38 432 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 C6orf50Q9HD87 102 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 TCEAL9Q9UHQ7 104 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 KCNG1Q9UIX4 513 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 MRVI1Q9Y6F6 885 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 MYO5AQ9Y4I1 1855 aaKnown RBP6.7□□□□□ -1.34
PROM1-201ENST00000447510 CCDC194A0A1B0GVG4 234 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 A0A1W2PRG0 241 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 PHF20L1A8MW92 1017 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 LARGE1O95461 756 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 CFBP00751 764 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 CCNA1P78396 465 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 NOGQ13253 232 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 DGKZQ13574 1117 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 FCHSD1Q86WN1 690 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 ERCC4Q92889 916 aaPredicted RBP6.7□□□□□ -1.34
PROM1-201ENST00000447510 SPATA32Q96LK8 384 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 CARD6Q9BX69 1037 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 PCDHA1Q9Y5I3 950 aa6.7□□□□□ -1.34
PROM1-201ENST00000447510 BAZ2AQ9UIF9 1905 aaKnown RBP6.69□□□□□ -1.34
PROM1-201ENST00000447510 NOP2P46087 812 aaKnown RBP6.69□□□□□ -1.34
PROM1-201ENST00000447510 JAG1P78504 1218 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 KIF22Q14807 665 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 CDC37Q16543 378 aaPredicted RBP6.69□□□□□ -1.34
PROM1-201ENST00000447510 SPRYD7Q5W111 196 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 TMTC3Q6ZXV5 915 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 LRRC8AQ8IWT6 810 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 GPKOWQ92917 476 aaPredicted RBP eCLIP6.69□□□□□ -1.34
PROM1-201ENST00000447510 CAPNS2Q96L46 248 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 PARK7Q99497 189 aaKnown RBP6.69□□□□□ -1.34
PROM1-201ENST00000447510 LLPHQ9BRT6 129 aaKnown RBP6.69□□□□□ -1.34
PROM1-201ENST00000447510 AMNQ9BXJ7 453 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 RAVER2Q9HCJ3 691 aaKnown RBP6.69□□□□□ -1.34
PROM1-201ENST00000447510 ZNF112Q9UJU3 913 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 TCHHQ07283 1943 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 GNA11P29992 359 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 MRPL12P52815 198 aaKnown RBP6.69□□□□□ -1.34
PROM1-201ENST00000447510 TROAPQ12815 778 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 RASGRP2Q7LDG7 609 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 RABEP2Q9H5N1 569 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 RNF216Q9NWF9 866 aaPredicted RBP6.69□□□□□ -1.34
PROM1-201ENST00000447510 VPS54Q9P1Q0 977 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 FHOD1Q9Y613 1164 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 MYH7P12883 1935 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 SPDYE3A6NKU9 549 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 PDHXO00330 501 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 IFNAR1P17181 557 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 CDC27P30260 824 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 COL9A3Q14050 684 aaPredicted RBP6.69□□□□□ -1.34
PROM1-201ENST00000447510 DHX8Q14562 1220 aaKnown RBP6.69□□□□□ -1.34
PROM1-201ENST00000447510 CT47A1Q5JQC4 288 aaPredicted RBP6.69□□□□□ -1.34
PROM1-201ENST00000447510 NOL9Q5SY16 702 aaKnown RBP6.69□□□□□ -1.34
PROM1-201ENST00000447510 CST9Q5W186 159 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 SNRNP48Q6IEG0 339 aaKnown RBP6.69□□□□□ -1.34
PROM1-201ENST00000447510 SRLQ86TD4 932 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 SAPCD2Q86UD0 394 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 ADGRF4Q8IZF3 695 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 ANKRD35Q8N283 1001 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 GMCL1P1Q8NEA9 526 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 COA7Q96BR5 231 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 ATG4CQ96DT6 458 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 INTS4Q96HW7 963 aaKnown RBP6.69□□□□□ -1.34
PROM1-201ENST00000447510 EHMT1Q9H9B1 1298 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 ZFYVE28Q9HCC9 887 aa6.69□□□□□ -1.34
PROM1-201ENST00000447510 MRPL11Q9Y3B7 192 aaKnown RBP6.69□□□□□ -1.34
PROM1-201ENST00000447510 SCG2P13521 617 aa6.68□□□□□ -1.34
PROM1-201ENST00000447510 CALML3P27482 149 aa6.68□□□□□ -1.34
PROM1-201ENST00000447510 GUCY1A2P33402 732 aa6.68□□□□□ -1.34
PROM1-201ENST00000447510 EVCP57679 992 aa6.68□□□□□ -1.34
PROM1-201ENST00000447510 HTRA3P83110 453 aa6.68□□□□□ -1.34
PROM1-201ENST00000447510 KIF23Q02241 960 aaPredicted RBP6.68□□□□□ -1.34
PROM1-201ENST00000447510 TMC6Q7Z403 805 aa6.68□□□□□ -1.34
PROM1-201ENST00000447510 METTL16Q86W50 562 aaKnown RBP6.68□□□□□ -1.34
PROM1-201ENST00000447510 MKL1Q969V6 931 aa6.68□□□□□ -1.34
PROM1-201ENST00000447510 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.68□□□□□ -1.34
PROM1-201ENST00000447510 ALDH8A1Q9H2A2 487 aaPredicted RBP6.68□□□□□ -1.34
PROM1-201ENST00000447510 PNMA2Q9UL42 364 aa6.68□□□□□ -1.34
PROM1-201ENST00000447510 PRR12Q9ULL5 1215 aa6.68□□□□□ -1.34
PROM1-201ENST00000447510 A0A1B0GUL6 1792 aa6.68□□□□□ -1.34
PROM1-201ENST00000447510 ZBTB48P10074 688 aaPredicted RBP6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms