RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 COL1A1P02452 1464 aaPredicted RBP8.53□□□□□ -1.04
TRIM4-204ENST00000447480 E7EWF7 191 aa8.53□□□□□ -1.04
TRIM4-204ENST00000447480 GOLIM4O00461 696 aa8.53□□□□□ -1.04
TRIM4-204ENST00000447480 PSMD14O00487 310 aa8.53□□□□□ -1.04
TRIM4-204ENST00000447480 CPLX1O14810 134 aa8.53□□□□□ -1.04
TRIM4-204ENST00000447480 RNF113AO15541 343 aaKnown RBP8.53□□□□□ -1.04
TRIM4-204ENST00000447480 IDH1O75874 414 aaKnown RBP8.53□□□□□ -1.04
TRIM4-204ENST00000447480 RAD17O75943 681 aa8.53□□□□□ -1.04
TRIM4-204ENST00000447480 RGS20O76081 388 aa8.53□□□□□ -1.04
TRIM4-204ENST00000447480 S1PR4O95977 384 aa8.53□□□□□ -1.04
TRIM4-204ENST00000447480 FDPSP14324 419 aaKnown RBP8.53□□□□□ -1.04
TRIM4-204ENST00000447480 VEGFAP15692 232 aaPredicted RBP8.53□□□□□ -1.04
TRIM4-204ENST00000447480 HOXA7P31268 230 aaPredicted RBP8.53□□□□□ -1.04
TRIM4-204ENST00000447480 SETQ01105 290 aaPredicted RBP8.53□□□□□ -1.04
TRIM4-204ENST00000447480 KIF23Q02241 960 aaPredicted RBP8.53□□□□□ -1.04
TRIM4-204ENST00000447480 APBA1Q02410 837 aa8.53□□□□□ -1.04
TRIM4-204ENST00000447480 CKAP4Q07065 602 aaKnown RBP8.53□□□□□ -1.04
TRIM4-204ENST00000447480 UBE3CQ15386 1083 aa8.53□□□□□ -1.04
TRIM4-204ENST00000447480 DLGAP5Q15398 846 aa8.53□□□□□ -1.04
TRIM4-204ENST00000447480 IMMTQ16891 758 aaKnown RBP8.53□□□□□ -1.04
TRIM4-204ENST00000447480 EMC10Q5UCC4 262 aa8.53□□□□□ -1.04
TRIM4-204ENST00000447480 MCTP2Q6DN12 878 aa8.53□□□□□ -1.04
TRIM4-204ENST00000447480 ZNF589Q86UQ0 364 aaPredicted RBP8.53□□□□□ -1.04
TRIM4-204ENST00000447480 C10orf67Q8IYJ2 551 aa8.53□□□□□ -1.04
TRIM4-204ENST00000447480 CCDC12Q8WUD4 166 aaPredicted RBP8.53□□□□□ -1.04
TRIM4-204ENST00000447480 SPSB2Q99619 263 aa8.53□□□□□ -1.04
TRIM4-204ENST00000447480 NAPGQ99747 312 aaPredicted RBP8.53□□□□□ -1.04
TRIM4-204ENST00000447480 NACAP1Q9BZK3 213 aa8.53□□□□□ -1.04
TRIM4-204ENST00000447480 ST7Q9NRC1 585 aa8.53□□□□□ -1.04
TRIM4-204ENST00000447480 SCN9AQ15858 1988 aa8.53□□□□□ -1.04
TRIM4-204ENST00000447480 TMCO5BA8MYB1 307 aa8.52□□□□□ -1.05
TRIM4-204ENST00000447480 HOXA2O43364 376 aa8.52□□□□□ -1.05
TRIM4-204ENST00000447480 ZEB2O60315 1214 aa8.52□□□□□ -1.05
TRIM4-204ENST00000447480 GGCXP38435 758 aa8.52□□□□□ -1.05
TRIM4-204ENST00000447480 RBM5P52756 815 aaKnown RBP eCLIP8.52□□□□□ -1.05
TRIM4-204ENST00000447480 USP46P62068 366 aa8.52□□□□□ -1.05
TRIM4-204ENST00000447480 CASP8Q14790 479 aa8.52□□□□□ -1.05
TRIM4-204ENST00000447480 TPRNQ4KMQ1 711 aa8.52□□□□□ -1.05
TRIM4-204ENST00000447480 SLC9C2Q5TAH2 1124 aa8.52□□□□□ -1.05
TRIM4-204ENST00000447480 FKBP1CQ5VVH2 108 aa8.52□□□□□ -1.05
TRIM4-204ENST00000447480 SPATA1Q5VX52 437 aa8.52□□□□□ -1.05
TRIM4-204ENST00000447480 YTHDF3Q7Z739 585 aaKnown RBP8.52□□□□□ -1.05
TRIM4-204ENST00000447480 TADA2BQ86TJ2 420 aa8.52□□□□□ -1.05
TRIM4-204ENST00000447480 TXNRD3Q86VQ6 643 aa8.52□□□□□ -1.05
TRIM4-204ENST00000447480 APOBEC3FQ8IUX4 373 aaKnown RBP8.52□□□□□ -1.05
TRIM4-204ENST00000447480 C3orf20Q8ND61 904 aa8.52□□□□□ -1.05
TRIM4-204ENST00000447480 CNNM3Q8NE01 707 aa8.52□□□□□ -1.05
TRIM4-204ENST00000447480 ANKRD20A12PQ8NF67 263 aa8.52□□□□□ -1.05
TRIM4-204ENST00000447480 NCOA7Q8NI08 942 aa8.52□□□□□ -1.05
TRIM4-204ENST00000447480 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.52□□□□□ -1.054e-7■■■■■ 48.7
TRIM4-204ENST00000447480 AIDAQ96BJ3 306 aa8.52□□□□□ -1.05
TRIM4-204ENST00000447480 THAP11Q96EK4 314 aa8.52□□□□□ -1.05
TRIM4-204ENST00000447480 TMEM87BQ96K49 555 aa8.52□□□□□ -1.05
TRIM4-204ENST00000447480 ANKZF1Q9H8Y5 726 aa8.52□□□□□ -1.05
TRIM4-204ENST00000447480 ZNF287Q9HBT7 754 aa8.52□□□□□ -1.05
TRIM4-204ENST00000447480 GPRC5DQ9NZD1 345 aa8.52□□□□□ -1.05
TRIM4-204ENST00000447480 KCNH3Q9ULD8 1083 aa8.52□□□□□ -1.05
TRIM4-204ENST00000447480 PPP2R3BQ9Y5P8 575 aa8.52□□□□□ -1.05
TRIM4-204ENST00000447480 PITPNM2Q9BZ72 1349 aa8.52□□□□□ -1.05
TRIM4-204ENST00000447480 YDJCA8MPS7 323 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 EBAG9O00559 213 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 OPA1O60313 960 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 WDHD1O75717 1129 aaPredicted RBP8.51□□□□□ -1.05
TRIM4-204ENST00000447480 SEC31AO94979 1220 aaKnown RBP8.51□□□□□ -1.05
TRIM4-204ENST00000447480 HSPD1P10809 573 aaKnown RBP8.51□□□□□ -1.05
TRIM4-204ENST00000447480 EPB41P11171 864 aaKnown RBP8.51□□□□□ -1.05
TRIM4-204ENST00000447480 PRLRP16471 622 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 KLRK1P26718 216 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 ZAP70P43403 619 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 GMPSP49915 693 aaPredicted RBP8.51□□□□□ -1.05
TRIM4-204ENST00000447480 PLCD1P51178 756 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 ZNF280AP59817 542 aaPredicted RBP8.51□□□□□ -1.05
TRIM4-204ENST00000447480 LMNB2Q03252 620 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 CEBPZQ03701 1054 aaKnown RBP8.51□□□□□ -1.05
TRIM4-204ENST00000447480 PPFIA1Q13136 1202 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 DRP2Q13474 957 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 TRIM29Q14134 588 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 MORC3Q14149 939 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 PTPAQ15257 358 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 SAFBQ15424 915 aaKnown RBP eCLIP8.51□□□□□ -1.05
TRIM4-204ENST00000447480 RILPL1Q5EBL4 403 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 ALS2CLQ60I27 953 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 CYP26C1Q6V0L0 522 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 RNF19BQ6ZMZ0 732 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 MICALCLQ6ZW33 695 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 CCDC50Q8IVM0 306 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 AFAP1L1Q8TED9 768 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 APPBP2Q92624 585 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 DHX58Q96C10 678 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 ZDHHC15Q96MV8 337 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 GSDMAQ96QA5 445 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 WDR24Q96S15 920 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 PAGR1Q9BTK6 254 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 BEGAINQ9BUH8 593 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 CRNKL1Q9BZJ0 848 aaKnown RBP8.51□□□□□ -1.05
TRIM4-204ENST00000447480 HAUS4Q9H6D7 363 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 GPBP1L1Q9HC44 474 aaPredicted RBP8.51□□□□□ -1.05
TRIM4-204ENST00000447480 PDE11AQ9HCR9 933 aa8.51□□□□□ -1.05
TRIM4-204ENST00000447480 ZCCHC17Q9NP64 241 aaKnown RBP8.51□□□□□ -1.05
TRIM4-204ENST00000447480 MYOZ2Q9NPC6 264 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms