RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 CCDC169A6NNP5 214 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 NR5A1Q13285 461 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 CUL3Q13618 768 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 ZNF365Q70YC5 407 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 MAB21L3Q8N8X9 362 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 RNF225M0QZC1 329 aaPredicted RBP5.52□□□□□ -1.53
HERC1-201ENST00000443617 EIF3BP55884 814 aaKnown RBP5.52□□□□□ -1.53
HERC1-201ENST00000443617 GRIN1Q05586 938 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 EEF2KMTQ96G04 330 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 NAP1L3Q99457 506 aaPredicted RBP5.52□□□□□ -1.53
HERC1-201ENST00000443617 TRIM31Q9BZY9 425 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 UNC13BO14795 1591 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 KCNK3O14649 394 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 BUB1O43683 1085 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 PPARAQ07869 468 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 LACTB2Q53H82 288 aaPredicted RBP5.52□□□□□ -1.53
HERC1-201ENST00000443617 C6orf118Q5T5N4 469 aa5.52□□□□□ -1.53
HERC1-201ENST00000443617 CHCHD3Q9NX63 227 aaKnown RBP5.52□□□□□ -1.53
HERC1-201ENST00000443617 HSD17B3P37058 310 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 ZNF844Q08AG5 666 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 RIPK1Q13546 671 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 ZNF658Q5TYW1 1059 aaPredicted RBP5.51□□□□□ -1.53
HERC1-201ENST00000443617 ANKLE2Q86XL3 938 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 MAP3K15Q6ZN16 1313 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 TULP1O00294 542 aaPredicted RBP5.51□□□□□ -1.53
HERC1-201ENST00000443617 POLE2P56282 527 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 METTL24Q5JXM2 366 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 TAOK3Q9H2K8 898 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 ATP4AP20648 1035 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 PRCPP42785 496 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 PDE6CP51160 858 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 KIF11P52732 1056 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 FANCBQ8NB91 859 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 CDK5RAP3Q96JB5 506 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 PAGR1Q9BTK6 254 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 hCG_1642624A0A1W2PR95 340 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 MARCH6O60337 910 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 LIFRP42702 1097 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 PRPF4BQ13523 1007 aaKnown RBP5.51□□□□□ -1.53
HERC1-201ENST00000443617 SLC9C1Q4G0N8 1177 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 VWA3BQ502W6 1294 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 TLR10Q9BXR5 811 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 AHCYL1O43865 530 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 PDHA1P08559 390 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 TATP17735 454 aaPredicted RBP5.51□□□□□ -1.53
HERC1-201ENST00000443617 ZNF662Q6ZS27 426 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 CRACR2BQ8N4Y2 399 aaPredicted RBP5.51□□□□□ -1.53
HERC1-201ENST00000443617 INTS9Q9NV88 658 aaKnown RBP5.51□□□□□ -1.53
HERC1-201ENST00000443617 CNGA1P29973 690 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 SPATA21Q7Z572 469 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 TCP11L1Q9NUJ3 509 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 SLC1A4P43007 532 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 TDRD12Q587J7 1177 aaKnown RBP5.51□□□□□ -1.53
HERC1-201ENST00000443617 SH2D4BQ5SQS7 431 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 CWF19L1Q69YN2 538 aaKnown RBP5.51□□□□□ -1.53
HERC1-201ENST00000443617 RFX7Q2KHR2 1363 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 CSB-PGBD3P0DP91 1061 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 TLDC1Q6P9B6 456 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 TMED8Q6PL24 325 aaPredicted RBP5.51□□□□□ -1.53
HERC1-201ENST00000443617 MFN1Q8IWA4 741 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 TEKT4Q8WW24 435 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 MAST3O60307 1309 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 ASAP2O43150 1006 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 DEXIO95424 95 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 PSMD1Q99460 953 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 STRN4Q9NRL3 753 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 G3BP2Q9UN86 482 aaKnown RBP5.51□□□□□ -1.53
HERC1-201ENST00000443617 TCP11X1B4DZS4 312 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 MGRN1O60291 552 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 PDE6BP35913 854 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 PIK3AP1Q6ZUJ8 805 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 KRT26Q7Z3Y9 468 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 PPP1R12CQ9BZL4 782 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 TAF1DQ9H5J8 278 aaPredicted RBP5.51□□□□□ -1.53
HERC1-201ENST00000443617 SH2D4AQ9H788 454 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 SCOCQ9UIL1 159 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 ABCA8O94911 1581 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 ABCC1P33527 1531 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 IGKV5-2P06315 115 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 FECHP22830 423 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 SMCR8Q8TEV9 937 aaPredicted RBP5.51□□□□□ -1.53
HERC1-201ENST00000443617 KLHL29Q96CT2 875 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 CALML3P27482 149 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 CNNM4Q6P4Q7 775 aa5.51□□□□□ -1.53
HERC1-201ENST00000443617 APBB1IPQ7Z5R6 666 aaPredicted RBP5.51□□□□□ -1.53
HERC1-201ENST00000443617 HOXC9P31274 260 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 GUCY1A2P33402 732 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 RASSF2P50749 326 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 PAPOLAP51003 745 aaKnown RBP5.5□□□□□ -1.53
HERC1-201ENST00000443617 MUM1Q2TAK8 710 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 ATP5HO75947 161 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 PEX26Q7Z412 305 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 ADSSL1Q8N142 457 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 IGDCC4Q8TDY8 1250 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 AP1M1Q9BXS5 423 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 GPR108Q9NPR9 543 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 VPS54Q9P1Q0 977 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 KCNJ2P63252 427 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 BYSLQ13895 437 aaKnown RBP5.5□□□□□ -1.53
HERC1-201ENST00000443617 GDAQ9Y2T3 454 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms