RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 MAPKAPK2P49137 400 aa7.36□□□□□ -1.23
VPS50-206ENST00000443443 TMEM151BQ8IW70 566 aa7.36□□□□□ -1.23
VPS50-206ENST00000443443 NLGN2Q8NFZ4 835 aa7.36□□□□□ -1.23
VPS50-206ENST00000443443 ACTR10Q9NZ32 417 aa7.36□□□□□ -1.23
VPS50-206ENST00000443443 LRP2BPQ9P2M1 347 aa7.36□□□□□ -1.23
VPS50-206ENST00000443443 RWDD3Q9Y3V2 267 aa7.36□□□□□ -1.23
VPS50-206ENST00000443443 ZC3H12DA2A288 527 aaKnown RBP7.35□□□□□ -1.23
VPS50-206ENST00000443443 KRTAP9-7A8MTY7 169 aa7.35□□□□□ -1.23
VPS50-206ENST00000443443 BUB1BO60566 1050 aaPredicted RBP7.35□□□□□ -1.23
VPS50-206ENST00000443443 DDAH1O94760 285 aa7.35□□□□□ -1.23
VPS50-206ENST00000443443 CORO7P57737 925 aa7.35□□□□□ -1.23
VPS50-206ENST00000443443 ZNF200P98182 395 aaPredicted RBP7.35□□□□□ -1.23
VPS50-206ENST00000443443 PLEKHN1Q494U1 663 aaPredicted RBP7.35□□□□□ -1.23
VPS50-206ENST00000443443 TNNI3KQ59H18 835 aa7.35□□□□□ -1.23
VPS50-206ENST00000443443 CNKSR3Q6P9H4 555 aa7.35□□□□□ -1.23
VPS50-206ENST00000443443 C6orf15Q6UXA7 325 aaPredicted RBP7.35□□□□□ -1.23
VPS50-206ENST00000443443 CABP7Q86V35 215 aa7.35□□□□□ -1.23
VPS50-206ENST00000443443 LZTR1Q8N653 840 aa7.35□□□□□ -1.23
VPS50-206ENST00000443443 GPRC5CQ9NQ84 441 aa7.35□□□□□ -1.23
VPS50-206ENST00000443443 HCFC2Q9Y5Z7 792 aa7.35□□□□□ -1.23
VPS50-206ENST00000443443 ETFBP38117 255 aa7.34□□□□□ -1.23
VPS50-206ENST00000443443 AFF3P51826 1226 aaKnown RBP7.34□□□□□ -1.23
VPS50-206ENST00000443443 ZNF143P52747 638 aaPredicted RBP7.34□□□□□ -1.23
VPS50-206ENST00000443443 PRR5P85299 388 aa7.34□□□□□ -1.23
VPS50-206ENST00000443443 SV2CQ496J9 727 aa7.34□□□□□ -1.23
VPS50-206ENST00000443443 IGDCC3Q8IVU1 814 aa7.34□□□□□ -1.23
VPS50-206ENST00000443443 LGR4Q9BXB1 951 aa7.34□□□□□ -1.23
VPS50-206ENST00000443443 RXFP1Q9HBX9 757 aa7.34□□□□□ -1.23
VPS50-206ENST00000443443 CLEC1BQ9P126 229 aa7.34□□□□□ -1.23
VPS50-206ENST00000443443 GULP1Q9UBP9 304 aa7.34□□□□□ -1.23
VPS50-206ENST00000443443 EMC9Q9Y3B6 208 aa7.34□□□□□ -1.23
VPS50-206ENST00000443443 R3HCC1Q9Y3T6 440 aaKnown RBP7.34□□□□□ -1.23
VPS50-206ENST00000443443 TRBV23OR9-2A0A075B6M9 112 aa7.33□□□□□ -1.24
VPS50-206ENST00000443443 PFKLP17858 780 aa7.33□□□□□ -1.24
VPS50-206ENST00000443443 DNAJA1P31689 397 aaKnown RBP7.33□□□□□ -1.24
VPS50-206ENST00000443443 ARID5AQ03989 594 aa7.33□□□□□ -1.24
VPS50-206ENST00000443443 SCRN1Q12765 414 aa7.33□□□□□ -1.24
VPS50-206ENST00000443443 VMACQ2NL98 169 aa7.33□□□□□ -1.24
VPS50-206ENST00000443443 FAM178BQ8IXR5 827 aa7.33□□□□□ -1.24
VPS50-206ENST00000443443 ZNF513Q8N8E2 541 aaPredicted RBP7.33□□□□□ -1.24
VPS50-206ENST00000443443 PWWP2AQ96N64 755 aa7.33□□□□□ -1.24
VPS50-206ENST00000443443 KRTAP4-2Q9BYR5 136 aa7.33□□□□□ -1.24
VPS50-206ENST00000443443 ZCCHC4Q9H5U6 513 aa7.33□□□□□ -1.24
VPS50-206ENST00000443443 PRKAG3Q9UGI9 489 aa7.33□□□□□ -1.24
VPS50-206ENST00000443443 PCDHA5Q9Y5H7 936 aa7.33□□□□□ -1.24
VPS50-206ENST00000443443 SRGAP3O43295 1099 aa7.32□□□□□ -1.24
VPS50-206ENST00000443443 NPHS1O60500 1241 aa7.32□□□□□ -1.24
VPS50-206ENST00000443443 INHBBP09529 407 aa7.32□□□□□ -1.24
VPS50-206ENST00000443443 PLS3P13797 630 aa7.32□□□□□ -1.24
VPS50-206ENST00000443443 TARBP2Q15633 366 aaKnown RBP7.32□□□□□ -1.24
VPS50-206ENST00000443443 FXNQ16595 210 aa7.32□□□□□ -1.24
VPS50-206ENST00000443443 GTF2IRD2BQ6EKJ0 949 aa7.32□□□□□ -1.24
VPS50-206ENST00000443443 GTF2IRD2Q86UP8 949 aa7.32□□□□□ -1.24
VPS50-206ENST00000443443 TMEFF1Q8IYR6 380 aa7.32□□□□□ -1.24
VPS50-206ENST00000443443 IRS4O14654 1257 aaPredicted RBP7.31□□□□□ -1.24
VPS50-206ENST00000443443 PPP1R11O60927 126 aaPredicted RBP7.31□□□□□ -1.24
VPS50-206ENST00000443443 FUCA1P04066 466 aa7.31□□□□□ -1.24
VPS50-206ENST00000443443 FAM129CQ86XR2 697 aa7.31□□□□□ -1.24
VPS50-206ENST00000443443 DACT3Q96B18 629 aaPredicted RBP7.31□□□□□ -1.24
VPS50-206ENST00000443443 EPB41L4AQ9HCS5 686 aaPredicted RBP7.31□□□□□ -1.24
VPS50-206ENST00000443443 CYP26B1Q9NR63 512 aa7.31□□□□□ -1.24
VPS50-206ENST00000443443 BTG4Q9NY30 223 aa7.31□□□□□ -1.24
VPS50-206ENST00000443443 FAN1Q9Y2M0 1017 aa7.31□□□□□ -1.24
VPS50-206ENST00000443443 C7orf72A4D263 438 aa7.3□□□□□ -1.24
VPS50-206ENST00000443443 B2RBV5 119 aa7.3□□□□□ -1.24
VPS50-206ENST00000443443 LIMS1P48059 325 aa7.3□□□□□ -1.24
VPS50-206ENST00000443443 TRIM59Q8IWR1 403 aa7.3□□□□□ -1.24
VPS50-206ENST00000443443 ALG3Q92685 438 aa7.3□□□□□ -1.24
VPS50-206ENST00000443443 COPS5Q92905 334 aa7.3□□□□□ -1.24
VPS50-206ENST00000443443 ZNF408Q9H9D4 720 aa7.3□□□□□ -1.24
VPS50-206ENST00000443443 NUDT5Q9UKK9 219 aa7.3□□□□□ -1.24
VPS50-206ENST00000443443 THBDP07204 575 aa7.29□□□□□ -1.24
VPS50-206ENST00000443443 GLI4P10075 376 aa7.29□□□□□ -1.24
VPS50-206ENST00000443443 ECI1P42126 302 aa7.29□□□□□ -1.24
VPS50-206ENST00000443443 LILRA6Q6PI73 481 aa7.29□□□□□ -1.24
VPS50-206ENST00000443443 TTLL10Q6ZVT0 673 aa7.29□□□□□ -1.24
VPS50-206ENST00000443443 NLGN1Q8N2Q7 840 aa7.29□□□□□ -1.24
VPS50-206ENST00000443443 BTN2A2Q8WVV5 523 aa7.29□□□□□ -1.24
VPS50-206ENST00000443443 MRGPRX3Q96LB0 322 aa7.29□□□□□ -1.24
VPS50-206ENST00000443443 NKX2-4Q9H2Z4 354 aa7.29□□□□□ -1.24
VPS50-206ENST00000443443 BCAS3Q9H6U6 928 aa7.29□□□□□ -1.24
VPS50-206ENST00000443443 PARD6AQ9NPB6 346 aa7.29□□□□□ -1.24
VPS50-206ENST00000443443 IRS2Q9Y4H2 1338 aa7.28□□□□□ -1.24
VPS50-206ENST00000443443 ITGAVP06756 1048 aa7.28□□□□□ -1.24
VPS50-206ENST00000443443 NCAM1P13591 858 aa7.28□□□□□ -1.24
VPS50-206ENST00000443443 KCNJ6P48051 423 aa7.28□□□□□ -1.24
VPS50-206ENST00000443443 MICAL1Q8TDZ2 1067 aa7.28□□□□□ -1.24
VPS50-206ENST00000443443 PEX11GQ96HA9 241 aa7.28□□□□□ -1.24
VPS50-206ENST00000443443 MMP19Q99542 508 aa7.28□□□□□ -1.24
VPS50-206ENST00000443443 TINF2Q9BSI4 451 aa7.28□□□□□ -1.24
VPS50-206ENST00000443443 MTA3Q9BTC8 594 aa7.28□□□□□ -1.24
VPS50-206ENST00000443443 ST7Q9NRC1 585 aa7.28□□□□□ -1.24
VPS50-206ENST00000443443 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.28□□□□□ -1.24
VPS50-206ENST00000443443 MARCH2Q9P0N8 246 aa7.28□□□□□ -1.24
VPS50-206ENST00000443443 FBLN5Q9UBX5 448 aa7.28□□□□□ -1.24
VPS50-206ENST00000443443 PLA2G2DQ9UNK4 145 aa7.28□□□□□ -1.24
VPS50-206ENST00000443443 SUSD5O60279 629 aa7.27□□□□□ -1.25
VPS50-206ENST00000443443 SASH1O94885 1247 aa7.27□□□□□ -1.25
VPS50-206ENST00000443443 NTRK1P04629 796 aa7.27□□□□□ -1.25
VPS50-206ENST00000443443 SNRPB2P08579 225 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms