RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 VGLL4Q14135 290 aa9.17□□□□□ -0.94
CCDC39-201ENST00000442201 UBE2SQ16763 222 aa9.17□□□□□ -0.94
CCDC39-201ENST00000442201 ENGASEQ8NFI3 743 aa9.17□□□□□ -0.94
CCDC39-201ENST00000442201 TBCKQ8TEA7 893 aa9.17□□□□□ -0.94
CCDC39-201ENST00000442201 ANKRD7Q92527 254 aa9.17□□□□□ -0.94
CCDC39-201ENST00000442201 FERMT2Q96AC1 680 aa9.17□□□□□ -0.94
CCDC39-201ENST00000442201 SLF1Q9BQI6 1058 aa9.17□□□□□ -0.94
CCDC39-201ENST00000442201 CALCOCO1Q9P1Z2 691 aa9.17□□□□□ -0.94
CCDC39-201ENST00000442201 MYH15Q9Y2K3 1946 aa9.17□□□□□ -0.94
CCDC39-201ENST00000442201 NDUFA8P51970 172 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 TTLL12Q14166 644 aaPredicted RBP9.16□□□□□ -0.94
CCDC39-201ENST00000442201 LETM2Q2VYF4 491 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 MCTP2Q6DN12 878 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 CCDC174Q6PII3 467 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 SHC4Q6S5L8 630 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 ZNF579Q8NAF0 562 aaKnown RBP9.16□□□□□ -0.94
CCDC39-201ENST00000442201 C12orf42Q96LP6 360 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 TNMDQ9H2S6 317 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 CLSTN2Q9H4D0 955 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 OGFRQ9NZT2 677 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 SNCAIPQ9Y6H5 919 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 FLOT1O75955 427 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 PFKFB1P16118 471 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 CLK2P49760 499 aaKnown RBP9.16□□□□□ -0.94
CCDC39-201ENST00000442201 HMGCS2P54868 508 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 SNW1Q13573 536 aaKnown RBP9.16□□□□□ -0.94
CCDC39-201ENST00000442201 DGKZQ13574 1117 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 LRSAM1Q6UWE0 723 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 FMR1NBQ8N0W7 255 aaPredicted RBP9.16□□□□□ -0.94
CCDC39-201ENST00000442201 RBM46Q8TBY0 533 aaKnown RBP9.16□□□□□ -0.94
CCDC39-201ENST00000442201 RPAP3Q9H6T3 665 aaPredicted RBP9.16□□□□□ -0.94
CCDC39-201ENST00000442201 TMOD4Q9NZQ9 345 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 MRVI1Q9Y6F6 885 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 USP17L15C9J2P7 530 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 USP17L13C9JLJ4 530 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 USP17L11C9JVI0 530 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 USP17L18D6R9N7 530 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 USP17L22D6RA61 530 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 USP17L17D6RBQ6 530 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 USP17L19D6RCP7 530 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 USP17L20D6RJB6 530 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 PRR29P0C7W0 189 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 USP17L24Q0WX57 530 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 CAMK4Q16566 473 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 MAP3K11Q16584 847 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 RESP18Q5W5W9 173 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 USP17L6PQ6QN14 398 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 CREBRFQ8IUR6 639 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 ANKRD13AQ8IZ07 590 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 FEZ2Q9UHY8 353 aaPredicted RBP9.16□□□□□ -0.94
CCDC39-201ENST00000442201 AFG3L2Q9Y4W6 797 aa9.16□□□□□ -0.94
CCDC39-201ENST00000442201 DCAF8L1A6NGE4 600 aa9.15□□□□□ -0.94
CCDC39-201ENST00000442201 NOP2P46087 812 aaKnown RBP9.15□□□□□ -0.94
CCDC39-201ENST00000442201 AP3B2Q13367 1082 aa9.15□□□□□ -0.94
CCDC39-201ENST00000442201 ORC2Q13416 577 aaPredicted RBP9.15□□□□□ -0.94
CCDC39-201ENST00000442201 ARL6IP4Q66PJ3 421 aaKnown RBP9.15□□□□□ -0.94
CCDC39-201ENST00000442201 PPP1R9AQ9ULJ8 1098 aa9.15□□□□□ -0.94
CCDC39-201ENST00000442201 MRPL11Q9Y3B7 192 aaKnown RBP9.15□□□□□ -0.94
CCDC39-201ENST00000442201 CTDP1Q9Y5B0 961 aaPredicted RBP9.15□□□□□ -0.94
CCDC39-201ENST00000442201 FAM237AA0A1B0GTK4 181 aa9.15□□□□□ -0.94
CCDC39-201ENST00000442201 LAD1O00515 517 aa9.15□□□□□ -0.94
CCDC39-201ENST00000442201 CTAGE5O15320 804 aa9.15□□□□□ -0.94
CCDC39-201ENST00000442201 CCNT1O60563 726 aaKnown RBP9.15□□□□□ -0.94
CCDC39-201ENST00000442201 FOSP01100 380 aaPredicted RBP9.15□□□□□ -0.94
CCDC39-201ENST00000442201 FDX1P10109 184 aa9.15□□□□□ -0.94
CCDC39-201ENST00000442201 SYKP43405 635 aa9.15□□□□□ -0.94
CCDC39-201ENST00000442201 GRIN1Q05586 938 aa9.15□□□□□ -0.94
CCDC39-201ENST00000442201 FAM43BQ6ZT52 329 aaPredicted RBP9.15□□□□□ -0.94
CCDC39-201ENST00000442201 ARMC9Q7Z3E5 817 aa9.15□□□□□ -0.94
CCDC39-201ENST00000442201 LDHDQ86WU2 507 aa9.15□□□□□ -0.94
CCDC39-201ENST00000442201 SDF4Q9BRK5 362 aa9.15□□□□□ -0.94
CCDC39-201ENST00000442201 CSRNP2Q9H175 543 aa9.15□□□□□ -0.94
CCDC39-201ENST00000442201 HPSEQ9Y251 543 aa9.15□□□□□ -0.94
CCDC39-201ENST00000442201 VWA3AA6NCI4 1184 aa9.14□□□□□ -0.95
CCDC39-201ENST00000442201 MEIS2O14770 477 aa9.14□□□□□ -0.95
CCDC39-201ENST00000442201 ZNF202O95125 648 aa9.14□□□□□ -0.95
CCDC39-201ENST00000442201 ICAM1P05362 532 aa9.14□□□□□ -0.95
CCDC39-201ENST00000442201 SPECC1Q5M775 1068 aa9.14□□□□□ -0.95
CCDC39-201ENST00000442201 PNMA2Q9UL42 364 aa9.14□□□□□ -0.95
CCDC39-201ENST00000442201 KCNH3Q9ULD8 1083 aa9.14□□□□□ -0.95
CCDC39-201ENST00000442201 ABCB11O95342 1321 aa9.14□□□□□ -0.95
CCDC39-201ENST00000442201 DOCK1Q14185 1865 aa9.14□□□□□ -0.95
CCDC39-201ENST00000442201 SPDYE3A6NKU9 549 aa9.14□□□□□ -0.95
CCDC39-201ENST00000442201 NEMFO60524 1076 aa9.14□□□□□ -0.95
CCDC39-201ENST00000442201 ZBED4O75132 1171 aa9.14□□□□□ -0.95
CCDC39-201ENST00000442201 SH3D19Q5HYK7 790 aa9.14□□□□□ -0.95
CCDC39-201ENST00000442201 ERO1BQ86YB8 467 aa9.14□□□□□ -0.95
CCDC39-201ENST00000442201 C4orf32Q8N8J7 132 aa9.14□□□□□ -0.95
CCDC39-201ENST00000442201 ANO3Q9BYT9 981 aa9.14□□□□□ -0.95
CCDC39-201ENST00000442201 SLC38A10Q9HBR0 1119 aa9.14□□□□□ -0.95
CCDC39-201ENST00000442201 CCPG1Q9ULG6 757 aa9.14□□□□□ -0.95
CCDC39-201ENST00000442201 ATAD5Q96QE3 1844 aa9.14□□□□□ -0.95
CCDC39-201ENST00000442201 POTEIP0CG38 1075 aa9.14□□□□□ -0.95
CCDC39-201ENST00000442201 POTEJP0CG39 1038 aa9.14□□□□□ -0.95
CCDC39-201ENST00000442201 TAL1P17542 331 aaPredicted RBP9.14□□□□□ -0.95
CCDC39-201ENST00000442201 PPATQ06203 517 aa9.14□□□□□ -0.95
CCDC39-201ENST00000442201 MAP1SQ66K74 1059 aaPredicted RBP9.14□□□□□ -0.95
CCDC39-201ENST00000442201 DTHD1Q6ZMT9 781 aa9.14□□□□□ -0.95
CCDC39-201ENST00000442201 NAP1L4Q99733 375 aaKnown RBP9.14□□□□□ -0.95
CCDC39-201ENST00000442201 ELP3Q9H9T3 547 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms