RNA–Protein interactions for RNA: ENST00000439928.2

SPATA13-213, Transcript of spermatogenesis associated 13, humanhuman

TSL 1 (best) BASIC

Gene SPATA13, Length 1,721 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA13-213ENST00000439928 SMCR8Q8TEV9 937 aaPredicted RBP13.84□□□□□ -0.19
SPATA13-213ENST00000439928 GTF3C2Q8WUA4 911 aaPredicted RBP13.84□□□□□ -0.19
SPATA13-213ENST00000439928 TRERF1Q96PN7 1200 aa13.84□□□□□ -0.19
SPATA13-213ENST00000439928 P2RX7Q99572 595 aaKnown RBP13.84□□□□□ -0.19
SPATA13-213ENST00000439928 SLC45A1Q9Y2W3 748 aa13.84□□□□□ -0.19
SPATA13-213ENST00000439928 LCTP09848 1927 aa13.84□□□□□ -0.19
SPATA13-213ENST00000439928 PDHXO00330 501 aa13.84□□□□□ -0.19
SPATA13-213ENST00000439928 MEIS2O14770 477 aa13.84□□□□□ -0.19
SPATA13-213ENST00000439928 BMP15O95972 392 aa13.84□□□□□ -0.19
SPATA13-213ENST00000439928 ME1P48163 572 aa13.84□□□□□ -0.19
SPATA13-213ENST00000439928 GPAT2Q6NUI2 795 aa13.84□□□□□ -0.19
SPATA13-213ENST00000439928 LBX2Q6XYB7 198 aa13.84□□□□□ -0.19
SPATA13-213ENST00000439928 NEK8Q86SG6 692 aa13.84□□□□□ -0.19
SPATA13-213ENST00000439928 TBCKQ8TEA7 893 aa13.84□□□□□ -0.19
SPATA13-213ENST00000439928 CCDC102AQ96A19 550 aa13.84□□□□□ -0.19
SPATA13-213ENST00000439928 EHMT1Q9H9B1 1298 aa13.84□□□□□ -0.19
SPATA13-213ENST00000439928 RNF146Q9NTX7 359 aa13.84□□□□□ -0.19
SPATA13-213ENST00000439928 PCDHB6Q9Y5E3 794 aa13.84□□□□□ -0.19
SPATA13-213ENST00000439928 MANSC4A6NHS7 340 aaPredicted RBP13.83□□□□□ -0.2
SPATA13-213ENST00000439928 OPLAHO14841 1288 aa13.83□□□□□ -0.2
SPATA13-213ENST00000439928 SPTLC2O15270 562 aa13.83□□□□□ -0.2
SPATA13-213ENST00000439928 HOXA13P31271 388 aaPredicted RBP13.83□□□□□ -0.2
SPATA13-213ENST00000439928 STAT3P40763 770 aa13.83□□□□□ -0.2
SPATA13-213ENST00000439928 TKFCQ3LXA3 575 aa13.83□□□□□ -0.2
SPATA13-213ENST00000439928 ANKRD23Q86SG2 305 aa13.83□□□□□ -0.2
SPATA13-213ENST00000439928 LINC00301Q8NCQ3 95 aa13.83□□□□□ -0.2
SPATA13-213ENST00000439928 BRI3BPQ8WY22 251 aa13.83□□□□□ -0.2
SPATA13-213ENST00000439928 PGBD1Q96JS3 809 aa13.83□□□□□ -0.2
SPATA13-213ENST00000439928 PAGR1Q9BTK6 254 aa13.83□□□□□ -0.2
SPATA13-213ENST00000439928 ANO3Q9BYT9 981 aa13.83□□□□□ -0.2
SPATA13-213ENST00000439928 LMBRD1Q9NUN5 540 aa13.83□□□□□ -0.2
SPATA13-213ENST00000439928 RCOR1Q9UKL0 485 aa13.83□□□□□ -0.2
SPATA13-213ENST00000439928 BTBD19C9JJ37 291 aa13.82□□□□□ -0.2
SPATA13-213ENST00000439928 NFIBO00712 420 aa13.82□□□□□ -0.2
SPATA13-213ENST00000439928 SLC10A3P09131 477 aa13.82□□□□□ -0.2
SPATA13-213ENST00000439928 UBE2HP62256 183 aa13.82□□□□□ -0.2
SPATA13-213ENST00000439928 SLC39A14Q15043 492 aa13.82□□□□□ -0.2
SPATA13-213ENST00000439928 LETM2Q2VYF4 491 aa13.82□□□□□ -0.2
SPATA13-213ENST00000439928 PAXIP1Q6ZW49 1069 aaPredicted RBP13.82□□□□□ -0.2
SPATA13-213ENST00000439928 FCHSD1Q86WN1 690 aa13.82□□□□□ -0.2
SPATA13-213ENST00000439928 SAMD3Q8N6K7 520 aa13.82□□□□□ -0.2
SPATA13-213ENST00000439928 HHIPL1Q96JK4 782 aa13.82□□□□□ -0.2
SPATA13-213ENST00000439928 PARK7Q99497 189 aaKnown RBP13.82□□□□□ -0.2
SPATA13-213ENST00000439928 ACAD9Q9H845 621 aa13.82□□□□□ -0.2
SPATA13-213ENST00000439928 MAP3K20Q9NYL2 800 aaKnown RBP13.82□□□□□ -0.2
SPATA13-213ENST00000439928 CCNT1O60563 726 aaKnown RBP13.81□□□□□ -0.2
SPATA13-213ENST00000439928 MCM7P33993 719 aa13.81□□□□□ -0.2
SPATA13-213ENST00000439928 TPRNQ4KMQ1 711 aa13.81□□□□□ -0.2
SPATA13-213ENST00000439928 MUM1L1Q5H9M0 696 aa13.81□□□□□ -0.2
SPATA13-213ENST00000439928 CLEC4DQ8WXI8 215 aa13.81□□□□□ -0.2
SPATA13-213ENST00000439928 NAP1L4Q99733 375 aaKnown RBP13.81□□□□□ -0.2
SPATA13-213ENST00000439928 SPATC1LQ9H0A9 340 aa13.81□□□□□ -0.2
SPATA13-213ENST00000439928 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.81□□□□□ -0.2
SPATA13-213ENST00000439928 RABGAP1Q9Y3P9 1069 aa13.81□□□□□ -0.2
SPATA13-213ENST00000439928 MCM3APO60318 1980 aa13.81□□□□□ -0.2
SPATA13-213ENST00000439928 PPP6R2O75170 966 aa13.81□□□□□ -0.2
SPATA13-213ENST00000439928 MBD3O95983 291 aa13.81□□□□□ -0.2
SPATA13-213ENST00000439928 CYP2C8P10632 490 aa13.81□□□□□ -0.2
SPATA13-213ENST00000439928 COPB2P35606 906 aa13.81□□□□□ -0.2
SPATA13-213ENST00000439928 HSD17B4P51659 736 aa13.81□□□□□ -0.2
SPATA13-213ENST00000439928 ORC2Q13416 577 aaPredicted RBP13.81□□□□□ -0.2
SPATA13-213ENST00000439928 ZNF174Q15697 407 aa13.81□□□□□ -0.2
SPATA13-213ENST00000439928 SKOR2Q2VWA4 1001 aaPredicted RBP13.81□□□□□ -0.2
SPATA13-213ENST00000439928 NSMFQ6X4W1 530 aa13.81□□□□□ -0.2
SPATA13-213ENST00000439928 RNF207Q6ZRF8 634 aa13.81□□□□□ -0.2
SPATA13-213ENST00000439928 CHST13Q8NET6 341 aa13.81□□□□□ -0.2
SPATA13-213ENST00000439928 BTBD7Q9P203 1132 aa13.81□□□□□ -0.2
SPATA13-213ENST00000439928 FBXO40Q9UH90 709 aa13.81□□□□□ -0.2
SPATA13-213ENST00000439928 RIPK3Q9Y572 518 aa13.81□□□□□ -0.2
SPATA13-213ENST00000439928 DDX49Q9Y6V7 483 aaKnown RBP13.81□□□□□ -0.2
SPATA13-213ENST00000439928 MGAMO43451 1857 aa13.8□□□□□ -0.2
SPATA13-213ENST00000439928 NEMFO60524 1076 aa13.8□□□□□ -0.2
SPATA13-213ENST00000439928 MARCKSP29966 332 aaPredicted RBP13.8□□□□□ -0.2
SPATA13-213ENST00000439928 GCLCP48506 637 aaPredicted RBP13.8□□□□□ -0.2
SPATA13-213ENST00000439928 INHBEP58166 350 aa13.8□□□□□ -0.2
SPATA13-213ENST00000439928 SREBF2Q12772 1141 aa13.8□□□□□ -0.2
SPATA13-213ENST00000439928 PTPAQ15257 358 aa13.8□□□□□ -0.2
SPATA13-213ENST00000439928 RIOX2Q8IUF8 465 aa13.8□□□□□ -0.2
SPATA13-213ENST00000439928 FAM43AQ8N2R8 423 aa13.8□□□□□ -0.2
SPATA13-213ENST00000439928 ZCCHC17Q9NP64 241 aaKnown RBP13.8□□□□□ -0.2
SPATA13-213ENST00000439928 TESPA1A2RU30 521 aaPredicted RBP13.79□□□□□ -0.2
SPATA13-213ENST00000439928 LAD1O00515 517 aa13.79□□□□□ -0.2
SPATA13-213ENST00000439928 GADD45BO75293 160 aaPredicted RBP13.79□□□□□ -0.2
SPATA13-213ENST00000439928 SLC25A27O95847 323 aa13.79□□□□□ -0.2
SPATA13-213ENST00000439928 GCFC2P16383 781 aaKnown RBP13.79□□□□□ -0.2
SPATA13-213ENST00000439928 SREBF1P36956 1147 aa13.79□□□□□ -0.2
SPATA13-213ENST00000439928 USP11P51784 963 aa13.79□□□□□ -0.2
SPATA13-213ENST00000439928 RPS6P62753 249 aaKnown RBP13.79□□□□□ -0.2
SPATA13-213ENST00000439928 ARHGAP4P98171 946 aa13.79□□□□□ -0.2
SPATA13-213ENST00000439928 GHRHRQ02643 423 aa13.79□□□□□ -0.2
SPATA13-213ENST00000439928 GRM1Q13255 1194 aa13.79□□□□□ -0.2
SPATA13-213ENST00000439928 PTGDRQ13258 359 aa13.79□□□□□ -0.2
SPATA13-213ENST00000439928 POTEHQ6S545 545 aa13.79□□□□□ -0.2
SPATA13-213ENST00000439928 NCAPG2Q86XI2 1143 aa13.79□□□□□ -0.2
SPATA13-213ENST00000439928 KRI1Q8N9T8 703 aaKnown RBP13.79□□□□□ -0.2
SPATA13-213ENST00000439928 TBC1D5Q92609 795 aa13.79□□□□□ -0.2
SPATA13-213ENST00000439928 MAF1Q9H063 256 aa13.79□□□□□ -0.2
SPATA13-213ENST00000439928 DOCK3Q8IZD9 2030 aa13.79□□□□□ -0.2
SPATA13-213ENST00000439928 WNT7AO00755 349 aa13.78□□□□□ -0.2
SPATA13-213ENST00000439928 ERVK-9P63128 1117 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms