RNA–Protein interactions for RNA: ENST00000439209.5

LRTOMT-208, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 3 BASIC

Gene LRTOMT, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-208ENST00000439209 TLR3O15455 904 aaKnown RBP13.14□□□□□ -0.31
LRTOMT-208ENST00000439209 DYNC1LI2O43237 492 aaPredicted RBP13.14□□□□□ -0.31
LRTOMT-208ENST00000439209 CD4P01730 458 aa13.14□□□□□ -0.31
LRTOMT-208ENST00000439209 CALML3P27482 149 aa13.14□□□□□ -0.31
LRTOMT-208ENST00000439209 GPATCH4Q5T3I0 446 aaKnown RBP13.14□□□□□ -0.31
LRTOMT-208ENST00000439209 IQSEC1Q6DN90 963 aa13.14□□□□□ -0.31
LRTOMT-208ENST00000439209 RNF207Q6ZRF8 634 aa13.14□□□□□ -0.31
LRTOMT-208ENST00000439209 DGKHQ86XP1 1220 aa13.14□□□□□ -0.31
LRTOMT-208ENST00000439209 SLC43A3Q8NBI5 491 aa13.14□□□□□ -0.31
LRTOMT-208ENST00000439209 PNMA1Q8ND90 353 aa13.14□□□□□ -0.31
LRTOMT-208ENST00000439209 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.14□□□□□ -0.31
LRTOMT-208ENST00000439209 DSCC1Q9BVC3 393 aa13.14□□□□□ -0.31
LRTOMT-208ENST00000439209 PPP1R12CQ9BZL4 782 aa13.14□□□□□ -0.31
LRTOMT-208ENST00000439209 GRIN2DO15399 1336 aa13.13□□□□□ -0.31
LRTOMT-208ENST00000439209 PRUNE2Q8WUY3 3088 aa13.13□□□□□ -0.31
LRTOMT-208ENST00000439209 LOC102724159A0A0B4J2E5 919 aa13.13□□□□□ -0.31
LRTOMT-208ENST00000439209 CABYRO75952 493 aa13.13□□□□□ -0.31
LRTOMT-208ENST00000439209 CSF2RAP15509 400 aa13.13□□□□□ -0.31
LRTOMT-208ENST00000439209 PDE4AP27815 886 aa13.13□□□□□ -0.31
LRTOMT-208ENST00000439209 RPS6P62753 249 aaKnown RBP13.13□□□□□ -0.31
LRTOMT-208ENST00000439209 PPIGQ13427 754 aaKnown RBP eCLIP13.13□□□□□ -0.31
LRTOMT-208ENST00000439209 PWP2Q15269 919 aaKnown RBP13.13□□□□□ -0.31
LRTOMT-208ENST00000439209 USH1GQ495M9 461 aa13.13□□□□□ -0.31
LRTOMT-208ENST00000439209 DUSP28Q4G0W2 176 aa13.13□□□□□ -0.31
LRTOMT-208ENST00000439209 IQCA1Q86XH1 822 aa13.13□□□□□ -0.31
LRTOMT-208ENST00000439209 ZSCAN10Q96SZ4 725 aaPredicted RBP13.13□□□□□ -0.31
LRTOMT-208ENST00000439209 CDX2Q99626 313 aaPredicted RBP13.13□□□□□ -0.31
LRTOMT-208ENST00000439209 UBA5Q9GZZ9 404 aa13.13□□□□□ -0.31
LRTOMT-208ENST00000439209 SEMA6BQ9H3T3 888 aa13.13□□□□□ -0.31
LRTOMT-208ENST00000439209 KAT14Q9H8E8 782 aa13.13□□□□□ -0.31
LRTOMT-208ENST00000439209 Q9Y3F1 56 aa13.13□□□□□ -0.31
LRTOMT-208ENST00000439209 TNKSO95271 1327 aa13.13□□□□□ -0.31
LRTOMT-208ENST00000439209 SPTBN5Q9NRC6 3674 aaKnown RBP13.12□□□□□ -0.31
LRTOMT-208ENST00000439209 VCANP13611 3396 aa13.12□□□□□ -0.31
LRTOMT-208ENST00000439209 RBM47A0AV96 593 aaKnown RBP13.12□□□□□ -0.31
LRTOMT-208ENST00000439209 DLL1O00548 723 aa13.12□□□□□ -0.31
LRTOMT-208ENST00000439209 ZEB2O60315 1214 aa13.12□□□□□ -0.31
LRTOMT-208ENST00000439209 GSPT1P15170 499 aaKnown RBP13.12□□□□□ -0.31
LRTOMT-208ENST00000439209 NT5C2P49902 561 aa13.12□□□□□ -0.31
LRTOMT-208ENST00000439209 PSMC6P62333 389 aa13.12□□□□□ -0.31
LRTOMT-208ENST00000439209 ITGA7Q13683 1181 aa13.12□□□□□ -0.31
LRTOMT-208ENST00000439209 CDC37Q16543 378 aaPredicted RBP13.12□□□□□ -0.31
LRTOMT-208ENST00000439209 IMMTQ16891 758 aaKnown RBP13.12□□□□□ -0.31
LRTOMT-208ENST00000439209 CCDC178Q5BJE1 867 aa13.12□□□□□ -0.31
LRTOMT-208ENST00000439209 C16orf59Q7L2K0 433 aa13.12□□□□□ -0.31
LRTOMT-208ENST00000439209 ENAHQ8N8S7 591 aaPredicted RBP13.12□□□□□ -0.31
LRTOMT-208ENST00000439209 WDR11Q9BZH6 1224 aa13.12□□□□□ -0.31
LRTOMT-208ENST00000439209 PNMA2Q9UL42 364 aa13.12□□□□□ -0.31
LRTOMT-208ENST00000439209 UMODL1Q5DID0 1318 aa13.12□□□□□ -0.31
LRTOMT-208ENST00000439209 EDNRBP24530 442 aa13.11□□□□□ -0.31
LRTOMT-208ENST00000439209 CYP2C18P33260 490 aa13.11□□□□□ -0.31
LRTOMT-208ENST00000439209 PDE4DQ08499 809 aa13.11□□□□□ -0.31
LRTOMT-208ENST00000439209 TMEM240Q5SV17 173 aa13.11□□□□□ -0.31
LRTOMT-208ENST00000439209 TTC22Q5TAA0 569 aa13.11□□□□□ -0.31
LRTOMT-208ENST00000439209 ADGRF4Q8IZF3 695 aa13.11□□□□□ -0.31
LRTOMT-208ENST00000439209 TMEM199Q8N511 208 aa13.11□□□□□ -0.31
LRTOMT-208ENST00000439209 DNERQ8NFT8 737 aa13.11□□□□□ -0.31
LRTOMT-208ENST00000439209 MYLIPQ8WY64 445 aa13.11□□□□□ -0.31
LRTOMT-208ENST00000439209 ANKS1AQ92625 1134 aa13.11□□□□□ -0.31
LRTOMT-208ENST00000439209 ZSWIM5Q9P217 1185 aa13.11□□□□□ -0.31
LRTOMT-208ENST00000439209 SUPT16HQ9Y5B9 1047 aaKnown RBP13.11□□□□□ -0.31
LRTOMT-208ENST00000439209 CHD9Q3L8U1 2897 aa13.11□□□□□ -0.31
LRTOMT-208ENST00000439209 TMEM265A0A087WTH1 108 aa13.1□□□□□ -0.31
LRTOMT-208ENST00000439209 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.1□□□□□ -0.31
LRTOMT-208ENST00000439209 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.1□□□□□ -0.31
LRTOMT-208ENST00000439209 B4GALT4O60513 344 aa13.1□□□□□ -0.31
LRTOMT-208ENST00000439209 ACRP10323 421 aa13.1□□□□□ -0.31
LRTOMT-208ENST00000439209 DNAJB2P25686 324 aa13.1□□□□□ -0.31
LRTOMT-208ENST00000439209 PURAQ00577 322 aaKnown RBP13.1□□□□□ -0.31
LRTOMT-208ENST00000439209 PPP2R5BQ15173 497 aa13.1□□□□□ -0.31
LRTOMT-208ENST00000439209 ASPRV1Q53RT3 343 aa13.1□□□□□ -0.31
LRTOMT-208ENST00000439209 RASIP1Q5U651 963 aa13.1□□□□□ -0.31
LRTOMT-208ENST00000439209 PSRC1Q6PGN9 363 aaPredicted RBP13.1□□□□□ -0.31
LRTOMT-208ENST00000439209 OR6J1Q8NGC5 347 aa13.1□□□□□ -0.31
LRTOMT-208ENST00000439209 KRT23Q9C075 422 aa13.1□□□□□ -0.31
LRTOMT-208ENST00000439209 TRPV6Q9H1D0 765 aa13.1□□□□□ -0.31
LRTOMT-208ENST00000439209 HIPK3Q9H422 1215 aa13.1□□□□□ -0.31
LRTOMT-208ENST00000439209 CTNNA3Q9UI47 895 aa13.1□□□□□ -0.31
LRTOMT-208ENST00000439209 TRIP12Q14669 1992 aaPredicted RBP13.1□□□□□ -0.31
LRTOMT-208ENST00000439209 ABCB11O95342 1321 aa13.1□□□□□ -0.31
LRTOMT-208ENST00000439209 PTPRSQ13332 1948 aa13.09□□□□□ -0.31
LRTOMT-208ENST00000439209 MYL3P08590 195 aa13.09□□□□□ -0.31
LRTOMT-208ENST00000439209 PARP1P09874 1014 aaKnown RBP13.09□□□□□ -0.31
LRTOMT-208ENST00000439209 CPT1AP50416 773 aa13.09□□□□□ -0.31
LRTOMT-208ENST00000439209 QRICH1Q2TAL8 776 aa13.09□□□□□ -0.31
LRTOMT-208ENST00000439209 ZNF365Q70YC5 407 aa13.09□□□□□ -0.31
LRTOMT-208ENST00000439209 RGS22Q8NE09 1264 aa13.09□□□□□ -0.31
LRTOMT-208ENST00000439209 TBC1D5Q92609 795 aa13.09□□□□□ -0.31
LRTOMT-208ENST00000439209 COPS5Q92905 334 aa13.09□□□□□ -0.31
LRTOMT-208ENST00000439209 MPHOSPH6Q99547 160 aaKnown RBP13.09□□□□□ -0.31
LRTOMT-208ENST00000439209 NOC4LQ9BVI4 516 aaKnown RBP13.09□□□□□ -0.31
LRTOMT-208ENST00000439209 SEZ6LQ9BYH1 1024 aa13.09□□□□□ -0.31
LRTOMT-208ENST00000439209 ALDH8A1Q9H2A2 487 aaPredicted RBP13.09□□□□□ -0.31
LRTOMT-208ENST00000439209 CNNM2Q9H8M5 875 aa13.09□□□□□ -0.31
LRTOMT-208ENST00000439209 IL23AQ9NPF7 189 aa13.09□□□□□ -0.31
LRTOMT-208ENST00000439209 POLR3EQ9NVU0 708 aa13.09□□□□□ -0.31
LRTOMT-208ENST00000439209 RAD50Q92878 1312 aa13.09□□□□□ -0.31
LRTOMT-208ENST00000439209 BAZ2BQ9UIF8 2168 aaKnown RBP13.08□□□□□ -0.31
LRTOMT-208ENST00000439209 DOCK5Q9H7D0 1870 aa13.08□□□□□ -0.32
LRTOMT-208ENST00000439209 GRXCR1A8MXD5 290 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms