RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 MTMR4Q9NYA4 1195 aa12.86□□□□□ -0.35
TRAPPC9-202ENST00000438773 KIAA1024Q9UPX6 916 aa12.86□□□□□ -0.35
TRAPPC9-202ENST00000438773 MORC2Q9Y6X9 1032 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC9-202ENST00000438773 BAZ2BQ9UIF8 2168 aaKnown RBP12.86□□□□□ -0.35
TRAPPC9-202ENST00000438773 LMO7Q8WWI1 1683 aa12.86□□□□□ -0.35
TRAPPC9-202ENST00000438773 F5H6K3 240 aa12.86□□□□□ -0.35
TRAPPC9-202ENST00000438773 KLRC3Q07444 240 aa12.86□□□□□ -0.35
TRAPPC9-202ENST00000438773 DDR1Q08345 913 aa12.86□□□□□ -0.35
TRAPPC9-202ENST00000438773 MYCT1Q8N699 235 aa12.86□□□□□ -0.35
TRAPPC9-202ENST00000438773 STK24Q9Y6E0 443 aa12.86□□□□□ -0.35
TRAPPC9-202ENST00000438773 TESPA1A2RU30 521 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 ZBTB5O15062 677 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 ARHGAP6O43182 974 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 ASNSP08243 561 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 ERCC5P28715 1186 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 RDXP35241 583 aaKnown RBP12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 TAX1BP1Q86VP1 789 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 EHBP1Q8NDI1 1231 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 ZBTB12Q9Y330 459 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 KCNJ18B7U540 433 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 POLRMTO00411 1230 aaKnown RBP12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 KRT86O43790 486 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 ATP2C2O75185 946 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 CASP1P29466 404 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 SSR1P43307 286 aaKnown RBP12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 KCNJ12Q14500 433 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 TERF2Q15554 542 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 GRIPAP1Q4V328 841 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 HHIPL2Q6UWX4 724 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 ZNF579Q8NAF0 562 aaKnown RBP12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 LARP4BQ92615 738 aaKnown RBP12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 PAGE5Q96GU1 130 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 MRPL44Q9H9J2 332 aaKnown RBP12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 CRYBG1Q9Y4K1 1723 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 TMCO5BA8MYB1 307 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 GCNT3O95395 438 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 TRIM14Q14142 442 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 C16orf86Q6ZW13 317 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 HINFPQ9BQA5 517 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 CARD6Q9BX69 1037 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 CUEDC2Q9H467 287 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 ARFGAP3Q9NP61 516 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 ZNF446Q9NWS9 450 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 CCDC169A6NNP5 214 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 POTEJP0CG39 1038 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 IRX3P78415 501 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 TBC1D10BQ4KMP7 808 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 ZNF569Q5MCW4 686 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 USP37Q86T82 979 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 MYOCDQ8IZQ8 938 aa12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.85□□□□□ -0.35
TRAPPC9-202ENST00000438773 USP17L15C9J2P7 530 aa12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 USP17L13C9JLJ4 530 aa12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 USP17L11C9JVI0 530 aa12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 USP17L18D6R9N7 530 aa12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 USP17L22D6RA61 530 aa12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 USP17L17D6RBQ6 530 aa12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 USP17L19D6RCP7 530 aa12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 USP17L20D6RJB6 530 aa12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 TUBB4AP04350 444 aa12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 EPB41P11171 864 aaKnown RBP12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 ATP1A3P13637 1013 aa12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 PLCG1P19174 1290 aa12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 HOXA13P31271 388 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 USP17L24Q0WX57 530 aa12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 FAM26FQ5R3K3 315 aa12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 USP17L6PQ6QN14 398 aa12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 NBPF11Q86T75 865 aa12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 KIAA0754O94854 1291 aa12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 CDC25BP30305 580 aa12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 SARM1Q6SZW1 724 aa12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 TBC1D5Q92609 795 aa12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 GDAP1L1Q96MZ0 367 aa12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 RNF181Q9P0P0 153 aa12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 FRMD4BQ9Y2L6 1034 aa12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 STYK1Q6J9G0 422 aa12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 NLRX1Q86UT6 975 aa12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 ZNF341Q9BYN7 854 aa12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 DISC1Q9NRI5 854 aa12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 MYO6Q9UM54 1294 aa12.84□□□□□ -0.35
TRAPPC9-202ENST00000438773 CAPN2P17655 700 aa12.83□□□□□ -0.36
TRAPPC9-202ENST00000438773 PABPC4Q13310 644 aaKnown RBP eCLIP12.83□□□□□ -0.366e-8■■■■■ 34.2
TRAPPC9-202ENST00000438773 RAPGEF1Q13905 1077 aa12.83□□□□□ -0.36
TRAPPC9-202ENST00000438773 E4F1Q66K89 784 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC9-202ENST00000438773 TTBK2Q6IQ55 1244 aa12.83□□□□□ -0.36
TRAPPC9-202ENST00000438773 MIER3Q7Z3K6 550 aa12.83□□□□□ -0.36
TRAPPC9-202ENST00000438773 MCF2L2Q86YR7 1114 aa12.83□□□□□ -0.36
TRAPPC9-202ENST00000438773 DCAF4Q8WV16 495 aa12.83□□□□□ -0.36
TRAPPC9-202ENST00000438773 PHF20Q9BVI0 1012 aa12.83□□□□□ -0.36
TRAPPC9-202ENST00000438773 ANO3Q9BYT9 981 aa12.83□□□□□ -0.36
TRAPPC9-202ENST00000438773 MAGEF1Q9HAY2 307 aa12.83□□□□□ -0.36
TRAPPC9-202ENST00000438773 TMEM260Q9NX78 707 aa12.83□□□□□ -0.36
TRAPPC9-202ENST00000438773 CCDC172P0C7W6 258 aa12.83□□□□□ -0.36
TRAPPC9-202ENST00000438773 EVCP57679 992 aa12.83□□□□□ -0.36
TRAPPC9-202ENST00000438773 GABPB1Q06547 395 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC9-202ENST00000438773 GOLGA8FQ08AF8 430 aa12.83□□□□□ -0.36
TRAPPC9-202ENST00000438773 GOLGA8DPQ0D2H9 430 aa12.83□□□□□ -0.36
TRAPPC9-202ENST00000438773 ADGRF4Q8IZF3 695 aa12.83□□□□□ -0.36
TRAPPC9-202ENST00000438773 SPZ1Q9BXG8 430 aa12.83□□□□□ -0.36
TRAPPC9-202ENST00000438773 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms