RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 TMEM60Q9H2L4 133 aa15.63■□□□□ 0.09
PTCHD3-201ENST00000438700 M0R2N6 131 aa15.63■□□□□ 0.09
PTCHD3-201ENST00000438700 JAG1P78504 1218 aa15.63■□□□□ 0.09
PTCHD3-201ENST00000438700 RRP1BQ14684 758 aaKnown RBP15.63■□□□□ 0.09
PTCHD3-201ENST00000438700 TTBK2Q6IQ55 1244 aa15.63■□□□□ 0.09
PTCHD3-201ENST00000438700 DAGLBQ8NCG7 672 aa15.63■□□□□ 0.09
PTCHD3-201ENST00000438700 RASSF8Q8NHQ8 419 aa15.63■□□□□ 0.09
PTCHD3-201ENST00000438700 PLIN2Q99541 437 aa15.63■□□□□ 0.09
PTCHD3-201ENST00000438700 BAG1Q99933 345 aaPredicted RBP15.63■□□□□ 0.09
PTCHD3-201ENST00000438700 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.63■□□□□ 0.09
PTCHD3-201ENST00000438700 NYAP2Q9P242 653 aa15.63■□□□□ 0.09
PTCHD3-201ENST00000438700 MAPK8IP1Q9UQF2 711 aa15.63■□□□□ 0.09
PTCHD3-201ENST00000438700 SEC31AO94979 1220 aaKnown RBP15.62■□□□□ 0.09
PTCHD3-201ENST00000438700 GH2P01242 217 aa15.62■□□□□ 0.09
PTCHD3-201ENST00000438700 NR1I3Q14994 352 aa15.62■□□□□ 0.09
PTCHD3-201ENST00000438700 TNIP1Q15025 636 aa15.62■□□□□ 0.09
PTCHD3-201ENST00000438700 ARL6IP4Q66PJ3 421 aaKnown RBP15.62■□□□□ 0.09
PTCHD3-201ENST00000438700 GALNT17Q6IS24 598 aa15.62■□□□□ 0.09
PTCHD3-201ENST00000438700 KCTD1Q719H9 257 aa15.62■□□□□ 0.09
PTCHD3-201ENST00000438700 SIAH1Q8IUQ4 282 aa15.62■□□□□ 0.09
PTCHD3-201ENST00000438700 FAM177A1Q8N128 213 aaPredicted RBP15.62■□□□□ 0.09
PTCHD3-201ENST00000438700 DNAI1Q9UI46 699 aa15.62■□□□□ 0.09
PTCHD3-201ENST00000438700 A0A1B0GTH6 734 aa15.62■□□□□ 0.09
PTCHD3-201ENST00000438700 PNMA6AP0CW24 399 aaPredicted RBP15.62■□□□□ 0.09
PTCHD3-201ENST00000438700 STAT6P42226 847 aa15.62■□□□□ 0.09
PTCHD3-201ENST00000438700 NBPF9Q3BBW0 867 aa15.62■□□□□ 0.09
PTCHD3-201ENST00000438700 RBM26Q5T8P6 1007 aaKnown RBP15.62■□□□□ 0.09
PTCHD3-201ENST00000438700 RRAGBQ5VZM2 374 aa15.62■□□□□ 0.09
PTCHD3-201ENST00000438700 APTXQ7Z2E3 356 aaKnown RBP15.62■□□□□ 0.09
PTCHD3-201ENST00000438700 CDAN1Q8IWY9 1227 aa15.62■□□□□ 0.09
PTCHD3-201ENST00000438700 CCDC12Q8WUD4 166 aaPredicted RBP15.62■□□□□ 0.09
PTCHD3-201ENST00000438700 MKL1Q969V6 931 aa15.62■□□□□ 0.09
PTCHD3-201ENST00000438700 TMEM39BQ9GZU3 492 aa15.62■□□□□ 0.09
PTCHD3-201ENST00000438700 MYOZ2Q9NPC6 264 aa15.62■□□□□ 0.09
PTCHD3-201ENST00000438700 HERC5Q9UII4 1024 aaKnown RBP15.62■□□□□ 0.09
PTCHD3-201ENST00000438700 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.62■□□□□ 0.09
PTCHD3-201ENST00000438700 ARFGEF1Q9Y6D6 1849 aa15.62■□□□□ 0.09
PTCHD3-201ENST00000438700 WNT10BO00744 389 aa15.61■□□□□ 0.09
PTCHD3-201ENST00000438700 POLR3GO15318 223 aaPredicted RBP15.61■□□□□ 0.09
PTCHD3-201ENST00000438700 ARHGAP6O43182 974 aa15.61■□□□□ 0.09
PTCHD3-201ENST00000438700 SLC16A2P36021 539 aa15.61■□□□□ 0.09
PTCHD3-201ENST00000438700 LONP1P36776 959 aaKnown RBP15.61■□□□□ 0.09
PTCHD3-201ENST00000438700 TXLNAP40222 546 aa15.61■□□□□ 0.09
PTCHD3-201ENST00000438700 PRELPP51888 382 aa15.61■□□□□ 0.09
PTCHD3-201ENST00000438700 GPATCH4Q5T3I0 446 aaKnown RBP15.61■□□□□ 0.09
PTCHD3-201ENST00000438700 CREBRFQ8IUR6 639 aa15.61■□□□□ 0.09
PTCHD3-201ENST00000438700 ZBTB9Q96C00 473 aa15.61■□□□□ 0.09
PTCHD3-201ENST00000438700 ZBED3Q96IU2 234 aaPredicted RBP15.61■□□□□ 0.09
PTCHD3-201ENST00000438700 ZMYND12Q9H0C1 365 aa15.61■□□□□ 0.09
PTCHD3-201ENST00000438700 LTBP3Q9NS15 1303 aa15.61■□□□□ 0.09
PTCHD3-201ENST00000438700 CCT6AP40227 531 aaKnown RBP15.61■□□□□ 0.09
PTCHD3-201ENST00000438700 BMS1Q14692 1282 aaKnown RBP15.61■□□□□ 0.09
PTCHD3-201ENST00000438700 DTHD1Q6ZMT9 781 aa15.61■□□□□ 0.09
PTCHD3-201ENST00000438700 ADGRF4Q8IZF3 695 aa15.61■□□□□ 0.09
PTCHD3-201ENST00000438700 CPLX3Q8WVH0 158 aa15.61■□□□□ 0.09
PTCHD3-201ENST00000438700 JMJD4Q9H9V9 463 aa15.61■□□□□ 0.09
PTCHD3-201ENST00000438700 CCDC66A2RUB6 948 aa15.6■□□□□ 0.09
PTCHD3-201ENST00000438700 SMCO2A6NFE2 343 aa15.6■□□□□ 0.09
PTCHD3-201ENST00000438700 GTPBP6O43824 516 aaPredicted RBP15.6■□□□□ 0.09
PTCHD3-201ENST00000438700 CDKAL1Q5VV42 579 aa15.6■□□□□ 0.09
PTCHD3-201ENST00000438700 FKBP1CQ5VVH2 108 aa15.6■□□□□ 0.09
PTCHD3-201ENST00000438700 TOGARAM2Q6ZUX3 1019 aa15.6■□□□□ 0.09
PTCHD3-201ENST00000438700 REXO1L1PQ8IX06 675 aa15.6■□□□□ 0.09
PTCHD3-201ENST00000438700 ZCCHC17Q9NP64 241 aaKnown RBP15.6■□□□□ 0.09
PTCHD3-201ENST00000438700 DISC1Q9NRI5 854 aa15.6■□□□□ 0.09
PTCHD3-201ENST00000438700 GDAQ9Y2T3 454 aa15.6■□□□□ 0.09
PTCHD3-201ENST00000438700 PPP2R2CQ9Y2T4 447 aa15.6■□□□□ 0.09
PTCHD3-201ENST00000438700 UTRNP46939 3433 aa15.6■□□□□ 0.09
PTCHD3-201ENST00000438700 CCP110O43303 1012 aa15.6■□□□□ 0.09
PTCHD3-201ENST00000438700 CAPN2P17655 700 aa15.6■□□□□ 0.09
PTCHD3-201ENST00000438700 SLC1A4P43007 532 aa15.6■□□□□ 0.09
PTCHD3-201ENST00000438700 HNRNPH2P55795 449 aaKnown RBP15.6■□□□□ 0.09
PTCHD3-201ENST00000438700 ETF1P62495 437 aaKnown RBP15.6■□□□□ 0.09
PTCHD3-201ENST00000438700 SLFN13Q68D06 897 aa15.6■□□□□ 0.09
PTCHD3-201ENST00000438700 DESI2Q9BSY9 194 aa15.6■□□□□ 0.09
PTCHD3-201ENST00000438700 C6orf50Q9HD87 102 aa15.6■□□□□ 0.09
PTCHD3-201ENST00000438700 ADD3Q9UEY8 706 aaKnown RBP15.6■□□□□ 0.09
PTCHD3-201ENST00000438700 EGFRP00533 1210 aa15.59■□□□□ 0.09
PTCHD3-201ENST00000438700 RPN1P04843 607 aaKnown RBP15.59■□□□□ 0.09
PTCHD3-201ENST00000438700 IGSF22Q8N9C0 903 aa15.59■□□□□ 0.09
PTCHD3-201ENST00000438700 COA7Q96BR5 231 aa15.59■□□□□ 0.09
PTCHD3-201ENST00000438700 SCAF8Q9UPN6 1271 aaKnown RBP15.59■□□□□ 0.09
PTCHD3-201ENST00000438700 USP17L10C9JJH3 530 aa15.59■□□□□ 0.09
PTCHD3-201ENST00000438700 GNA11P29992 359 aa15.59■□□□□ 0.09
PTCHD3-201ENST00000438700 CYP2C19P33261 490 aa15.59■□□□□ 0.09
PTCHD3-201ENST00000438700 LETM2Q2VYF4 491 aa15.59■□□□□ 0.09
PTCHD3-201ENST00000438700 NAALADL2Q58DX5 795 aa15.59■□□□□ 0.09
PTCHD3-201ENST00000438700 CT47A1Q5JQC4 288 aaPredicted RBP15.59■□□□□ 0.09
PTCHD3-201ENST00000438700 TRIM65Q6PJ69 517 aa15.59■□□□□ 0.09
PTCHD3-201ENST00000438700 FAM83AQ86UY5 434 aa15.59■□□□□ 0.09
PTCHD3-201ENST00000438700 DCAF4Q8WV16 495 aa15.59■□□□□ 0.09
PTCHD3-201ENST00000438700 PYM1Q9BRP8 204 aaKnown RBP15.59■□□□□ 0.09
PTCHD3-201ENST00000438700 hCG_1984214I3L0E3 225 aa15.58■□□□□ 0.09
PTCHD3-201ENST00000438700 STX10O60499 249 aa15.58■□□□□ 0.09
PTCHD3-201ENST00000438700 UBA7P41226 1012 aa15.58■□□□□ 0.09
PTCHD3-201ENST00000438700 GMPSP49915 693 aaPredicted RBP15.58■□□□□ 0.09
PTCHD3-201ENST00000438700 MTF1Q14872 753 aa15.58■□□□□ 0.09
PTCHD3-201ENST00000438700 ZNF713Q8N859 430 aaPredicted RBP15.58■□□□□ 0.09
PTCHD3-201ENST00000438700 NEK11Q8NG66 645 aa15.58■□□□□ 0.09
PTCHD3-201ENST00000438700 GJA3Q9Y6H8 435 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms