RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 CPP00450 1065 aa12.5□□□□□ -0.41
PTCH1-209ENST00000437951 NPR1P16066 1061 aa12.5□□□□□ -0.41
PTCH1-209ENST00000437951 PSMC1P62191 440 aaKnown RBP12.5□□□□□ -0.41
PTCH1-209ENST00000437951 TMTC4Q5T4D3 741 aa12.5□□□□□ -0.41
PTCH1-209ENST00000437951 TRIM59Q8IWR1 403 aa12.5□□□□□ -0.41
PTCH1-209ENST00000437951 ZMYND12Q9H0C1 365 aa12.5□□□□□ -0.41
PTCH1-209ENST00000437951 LRWD1Q9UFC0 647 aa12.5□□□□□ -0.41
PTCH1-209ENST00000437951 MT-ND3P03897 115 aa12.5□□□□□ -0.41
PTCH1-209ENST00000437951 MYL1P05976 194 aa12.5□□□□□ -0.41
PTCH1-209ENST00000437951 IFNL2Q8IZJ0 200 aa12.5□□□□□ -0.41
PTCH1-209ENST00000437951 ZBTB40Q9NUA8 1239 aa12.5□□□□□ -0.41
PTCH1-209ENST00000437951 CHCHD3Q9NX63 227 aaKnown RBP12.5□□□□□ -0.41
PTCH1-209ENST00000437951 HEXIM1O94992 359 aaKnown RBP12.5□□□□□ -0.41
PTCH1-209ENST00000437951 EPB41L5Q9HCM4 733 aa12.5□□□□□ -0.41
PTCH1-209ENST00000437951 PCF11O94913 1555 aaKnown RBP12.5□□□□□ -0.41
PTCH1-209ENST00000437951 TMEM247A6NEH6 219 aa12.5□□□□□ -0.41
PTCH1-209ENST00000437951 PODXLO00592 558 aa12.5□□□□□ -0.41
PTCH1-209ENST00000437951 SLFN14P0C7P3 912 aa12.5□□□□□ -0.41
PTCH1-209ENST00000437951 IFNAR2P48551 515 aa12.5□□□□□ -0.41
PTCH1-209ENST00000437951 TRMT10CQ7L0Y3 403 aaKnown RBP12.5□□□□□ -0.41
PTCH1-209ENST00000437951 C1orf112Q9NSG2 853 aa12.5□□□□□ -0.41
PTCH1-209ENST00000437951 ZNF148Q9UQR1 794 aa12.5□□□□□ -0.41
PTCH1-209ENST00000437951 CLCN6P51797 869 aa12.49□□□□□ -0.41
PTCH1-209ENST00000437951 LZICQ8WZA0 190 aa12.49□□□□□ -0.41
PTCH1-209ENST00000437951 PLIN2Q99541 437 aa12.49□□□□□ -0.41
PTCH1-209ENST00000437951 MRGBPQ9NV56 204 aa12.49□□□□□ -0.41
PTCH1-209ENST00000437951 MCM9Q9NXL9 1143 aa12.49□□□□□ -0.41
PTCH1-209ENST00000437951 CDV3Q9UKY7 258 aaKnown RBP12.49□□□□□ -0.41
PTCH1-209ENST00000437951 SBNO1A3KN83 1393 aa12.49□□□□□ -0.41
PTCH1-209ENST00000437951 POC1B-GALNT4F8VUJ3 575 aa12.49□□□□□ -0.41
PTCH1-209ENST00000437951 NVLO15381 856 aaKnown RBP12.49□□□□□ -0.41
PTCH1-209ENST00000437951 ATF7P17544 494 aaPredicted RBP12.49□□□□□ -0.41
PTCH1-209ENST00000437951 NEK8Q86SG6 692 aa12.49□□□□□ -0.41
PTCH1-209ENST00000437951 NBPF5PQ86XG9 351 aaPredicted RBP12.49□□□□□ -0.41
PTCH1-209ENST00000437951 HOOK2Q96ED9 719 aa12.49□□□□□ -0.41
PTCH1-209ENST00000437951 MRPS26Q9BYN8 205 aaKnown RBP12.49□□□□□ -0.41
PTCH1-209ENST00000437951 TRIM8Q9BZR9 551 aa12.49□□□□□ -0.41
PTCH1-209ENST00000437951 PNMA6AP0CW24 399 aaPredicted RBP12.49□□□□□ -0.41
PTCH1-209ENST00000437951 CMA1P23946 247 aa12.49□□□□□ -0.41
PTCH1-209ENST00000437951 ADCY7P51828 1080 aa12.49□□□□□ -0.41
PTCH1-209ENST00000437951 OTUD6AQ7L8S5 288 aa12.49□□□□□ -0.41
PTCH1-209ENST00000437951 TTC6Q86TZ1 520 aa12.49□□□□□ -0.41
PTCH1-209ENST00000437951 CABP7Q86V35 215 aa12.49□□□□□ -0.41
PTCH1-209ENST00000437951 GPHNQ9NQX3 736 aaPredicted RBP12.49□□□□□ -0.41
PTCH1-209ENST00000437951 ZRANB2O95218 330 aaKnown RBP eCLIP12.49□□□□□ -0.41
PTCH1-209ENST00000437951 KIF21AQ7Z4S6 1674 aa12.49□□□□□ -0.41
PTCH1-209ENST00000437951 SERPINB4P48594 390 aa12.49□□□□□ -0.41
PTCH1-209ENST00000437951 RAB14P61106 215 aa12.49□□□□□ -0.41
PTCH1-209ENST00000437951 SETDB2Q96T68 719 aa12.49□□□□□ -0.41
PTCH1-209ENST00000437951 NEUROG2Q9H2A3 272 aa12.49□□□□□ -0.41
PTCH1-209ENST00000437951 RTEL1Q9NZ71 1219 aa12.49□□□□□ -0.41
PTCH1-209ENST00000437951 IGBP1P78318 339 aa12.49□□□□□ -0.41
PTCH1-209ENST00000437951 TMEM63CQ9P1W3 806 aa12.49□□□□□ -0.41
PTCH1-209ENST00000437951 SLC13A4Q9UKG4 626 aa12.49□□□□□ -0.41
PTCH1-209ENST00000437951 GTPBP6O43824 516 aaPredicted RBP12.48□□□□□ -0.41
PTCH1-209ENST00000437951 TMED2Q15363 201 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 OSBPL1AQ9BXW6 950 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 MPP6Q9NZW5 540 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 ARMCX3Q9UH62 379 aaPredicted RBP12.48□□□□□ -0.41
PTCH1-209ENST00000437951 ADCY3O60266 1144 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 SF3A3Q12874 501 aaKnown RBP eCLIP12.48□□□□□ -0.41
PTCH1-209ENST00000437951 CENPUQ71F23 418 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 PCGF5Q86SE9 256 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 WDR75Q8IWA0 830 aaKnown RBP12.48□□□□□ -0.41
PTCH1-209ENST00000437951 SLFN12Q8IYM2 578 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 PROCA1Q8NCQ7 364 aaPredicted RBP12.48□□□□□ -0.41
PTCH1-209ENST00000437951 MAGOHBQ96A72 148 aaKnown RBP12.48□□□□□ -0.41
PTCH1-209ENST00000437951 PANX2Q96RD6 677 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 KLC4Q9NSK0 619 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 TLK1Q9UKI8 766 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 PNOCQ13519 176 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 NAF1Q96HR8 494 aaKnown RBP12.48□□□□□ -0.41
PTCH1-209ENST00000437951 POLKQ9UBT6 870 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 STRIP2Q9ULQ0 834 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 S100A5P33763 92 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 TERB1Q8NA31 727 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 PITPNM3Q9BZ71 974 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 NACA2Q9H009 215 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 POLR3AO14802 1390 aaPredicted RBP12.48□□□□□ -0.41
PTCH1-209ENST00000437951 SGK1O00141 431 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 LAD1O00515 517 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 PIK3C2GO75747 1445 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 GCFC2P16383 781 aaKnown RBP12.48□□□□□ -0.41
PTCH1-209ENST00000437951 GNPTABQ3T906 1256 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 UHRF1BP1Q6BDS2 1440 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 DIS3L2Q8IYB7 885 aaKnown RBP12.48□□□□□ -0.41
PTCH1-209ENST00000437951 A6NJR5 290 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 DHX38Q92620 1227 aaKnown RBP12.48□□□□□ -0.41
PTCH1-209ENST00000437951 ZNF653Q96CK0 615 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 ZBTB18Q99592 522 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 GID8Q9NWU2 228 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 EXOC1LA0A1B0GW35 172 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 WBP4O75554 376 aaKnown RBP12.48□□□□□ -0.41
PTCH1-209ENST00000437951 OATP04181 439 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 DESI2Q9BSY9 194 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 ZFP69BQ9UJL9 534 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 APOBEC2Q9Y235 224 aaKnown RBP12.48□□□□□ -0.41
PTCH1-209ENST00000437951 SNX14Q9Y5W7 946 aa12.48□□□□□ -0.41
PTCH1-209ENST00000437951 DENND2AQ9ULE3 1009 aa12.47□□□□□ -0.41
PTCH1-209ENST00000437951 ATP8A1Q9Y2Q0 1164 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms