RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 ZNF697Q5TEC3 545 aa16.94■□□□□ 0.3
TNFRSF1A-203ENST00000437813 CWC27Q6UX04 472 aaKnown RBP16.94■□□□□ 0.3
TNFRSF1A-203ENST00000437813 EEPD1Q7L9B9 569 aa16.94■□□□□ 0.3
TNFRSF1A-203ENST00000437813 ESR2Q92731 530 aa16.94■□□□□ 0.3
TNFRSF1A-203ENST00000437813 VWCEQ96DN2 955 aa16.94■□□□□ 0.3
TNFRSF1A-203ENST00000437813 RNPC3Q96LT9 517 aaKnown RBP16.94■□□□□ 0.3
TNFRSF1A-203ENST00000437813 FAM161BQ96MY7 647 aa16.94■□□□□ 0.3
TNFRSF1A-203ENST00000437813 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.94■□□□□ 0.39e-6■■■■■ 27.7
TNFRSF1A-203ENST00000437813 CHD7Q9P2D1 2997 aa16.94■□□□□ 0.3
TNFRSF1A-203ENST00000437813 DYNC1LI2O43237 492 aaPredicted RBP16.93■□□□□ 0.3
TNFRSF1A-203ENST00000437813 CABYRO75952 493 aa16.93■□□□□ 0.3
TNFRSF1A-203ENST00000437813 RPS6P62753 249 aaKnown RBP16.93■□□□□ 0.3
TNFRSF1A-203ENST00000437813 TMEM240Q5SV17 173 aa16.93■□□□□ 0.3
TNFRSF1A-203ENST00000437813 GPATCH4Q5T3I0 446 aaKnown RBP16.93■□□□□ 0.3
TNFRSF1A-203ENST00000437813 ENAHQ8N8S7 591 aaPredicted RBP16.93■□□□□ 0.3
TNFRSF1A-203ENST00000437813 CDX2Q99626 313 aaPredicted RBP16.93■□□□□ 0.3
TNFRSF1A-203ENST00000437813 ZKSCAN3Q9BRR0 538 aa16.93■□□□□ 0.3
TNFRSF1A-203ENST00000437813 CPVLQ9H3G5 476 aa16.93■□□□□ 0.3
TNFRSF1A-203ENST00000437813 RNF216Q9NWF9 866 aaPredicted RBP16.93■□□□□ 0.3
TNFRSF1A-203ENST00000437813 PNMA2Q9UL42 364 aa16.93■□□□□ 0.3
TNFRSF1A-203ENST00000437813 TMEM265A0A087WTH1 108 aa16.92■□□□□ 0.3
TNFRSF1A-203ENST00000437813 ZNF213O14771 459 aa16.92■□□□□ 0.3
TNFRSF1A-203ENST00000437813 KDM4AO75164 1064 aa16.92■□□□□ 0.3
TNFRSF1A-203ENST00000437813 CSF2RAP15509 400 aa16.92■□□□□ 0.3
TNFRSF1A-203ENST00000437813 RGS22Q8NE09 1264 aa16.92■□□□□ 0.3
TNFRSF1A-203ENST00000437813 ZSWIM5Q9P217 1185 aa16.92■□□□□ 0.3
TNFRSF1A-203ENST00000437813 ADD3Q9UEY8 706 aaKnown RBP16.92■□□□□ 0.3
TNFRSF1A-203ENST00000437813 B4E1Z4 1266 aa16.91■□□□□ 0.3
TNFRSF1A-203ENST00000437813 HIP1O00291 1037 aa16.91■□□□□ 0.3
TNFRSF1A-203ENST00000437813 GOLGA8HP0CJ92 632 aa16.91■□□□□ 0.3
TNFRSF1A-203ENST00000437813 GSPT1P15170 499 aaKnown RBP16.91■□□□□ 0.3
TNFRSF1A-203ENST00000437813 ITGA7Q13683 1181 aa16.91■□□□□ 0.3
TNFRSF1A-203ENST00000437813 PNMA1Q8ND90 353 aa16.91■□□□□ 0.3
TNFRSF1A-203ENST00000437813 SEZ6LQ9BYH1 1024 aa16.91■□□□□ 0.3
TNFRSF1A-203ENST00000437813 MAF1Q9H063 256 aa16.91■□□□□ 0.3
TNFRSF1A-203ENST00000437813 AP5M1Q9H0R1 490 aa16.91■□□□□ 0.3
TNFRSF1A-203ENST00000437813 DIAPH3Q9NSV4 1193 aa16.91■□□□□ 0.3
TNFRSF1A-203ENST00000437813 MYH6P13533 1939 aa16.91■□□□□ 0.3
TNFRSF1A-203ENST00000437813 UMODL1Q5DID0 1318 aa16.91■□□□□ 0.3
TNFRSF1A-203ENST00000437813 TTC28Q96AY4 2481 aa16.9■□□□□ 0.3
TNFRSF1A-203ENST00000437813 PTPDC1A2A3K4 754 aa16.9■□□□□ 0.3
TNFRSF1A-203ENST00000437813 CYP2C18P33260 490 aa16.9■□□□□ 0.3
TNFRSF1A-203ENST00000437813 PURAQ00577 322 aaKnown RBP16.9■□□□□ 0.3
TNFRSF1A-203ENST00000437813 RNF207Q6ZRF8 634 aa16.9■□□□□ 0.3
TNFRSF1A-203ENST00000437813 KIAA1211Q6ZU35 1233 aa16.9■□□□□ 0.3
TNFRSF1A-203ENST00000437813 NOL8Q76FK4 1167 aaKnown RBP16.9■□□□□ 0.3
TNFRSF1A-203ENST00000437813 DNERQ8NFT8 737 aa16.9■□□□□ 0.3
TNFRSF1A-203ENST00000437813 VTI1AQ96AJ9 217 aa16.9■□□□□ 0.3
TNFRSF1A-203ENST00000437813 ZSCAN10Q96SZ4 725 aaPredicted RBP16.9■□□□□ 0.3
TNFRSF1A-203ENST00000437813 NOC4LQ9BVI4 516 aaKnown RBP16.9■□□□□ 0.3
TNFRSF1A-203ENST00000437813 WDR11Q9BZH6 1224 aa16.9■□□□□ 0.3
TNFRSF1A-203ENST00000437813 UBA5Q9GZZ9 404 aa16.9■□□□□ 0.3
TNFRSF1A-203ENST00000437813 KIAA1217Q5T5P2 1943 aa16.9■□□□□ 0.3
TNFRSF1A-203ENST00000437813 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.89■□□□□ 0.29
TNFRSF1A-203ENST00000437813 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.89■□□□□ 0.29
TNFRSF1A-203ENST00000437813 DLL1O00548 723 aa16.89■□□□□ 0.29
TNFRSF1A-203ENST00000437813 B4GALT4O60513 344 aa16.89■□□□□ 0.29
TNFRSF1A-203ENST00000437813 HOXD11P31277 338 aaPredicted RBP16.89■□□□□ 0.29
TNFRSF1A-203ENST00000437813 PSMC6P62333 389 aa16.89■□□□□ 0.29
TNFRSF1A-203ENST00000437813 PPIGQ13427 754 aaKnown RBP eCLIP16.89■□□□□ 0.298e-8■■■■□ 26.7
TNFRSF1A-203ENST00000437813 SEC23AQ15436 765 aa16.89■□□□□ 0.29
TNFRSF1A-203ENST00000437813 CCDC178Q5BJE1 867 aa16.89■□□□□ 0.29
TNFRSF1A-203ENST00000437813 ADGRF4Q8IZF3 695 aa16.89■□□□□ 0.29
TNFRSF1A-203ENST00000437813 TBC1D5Q92609 795 aa16.89■□□□□ 0.29
TNFRSF1A-203ENST00000437813 PPP1R12CQ9BZL4 782 aa16.89■□□□□ 0.29
TNFRSF1A-203ENST00000437813 TRPV6Q9H1D0 765 aa16.89■□□□□ 0.29
TNFRSF1A-203ENST00000437813 WNT8AQ9H1J5 351 aa16.89■□□□□ 0.29
TNFRSF1A-203ENST00000437813 COL20A1Q9P218 1284 aa16.89■□□□□ 0.29
TNFRSF1A-203ENST00000437813 OPLAHO14841 1288 aa16.88■□□□□ 0.29
TNFRSF1A-203ENST00000437813 TLR3O15455 904 aaKnown RBP16.88■□□□□ 0.29
TNFRSF1A-203ENST00000437813 DNAJB2P25686 324 aa16.88■□□□□ 0.29
TNFRSF1A-203ENST00000437813 CALML3P27482 149 aa16.88■□□□□ 0.29
TNFRSF1A-203ENST00000437813 GHRHRQ02643 423 aa16.88■□□□□ 0.29
TNFRSF1A-203ENST00000437813 CDC37Q16543 378 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF1A-203ENST00000437813 SLC35G1Q2M3R5 365 aa16.88■□□□□ 0.29
TNFRSF1A-203ENST00000437813 ASPRV1Q53RT3 343 aa16.88■□□□□ 0.29
TNFRSF1A-203ENST00000437813 TTC22Q5TAA0 569 aa16.88■□□□□ 0.29
TNFRSF1A-203ENST00000437813 CCDC62Q6P9F0 684 aa16.88■□□□□ 0.29
TNFRSF1A-203ENST00000437813 ZNF365Q70YC5 407 aa16.88■□□□□ 0.29
TNFRSF1A-203ENST00000437813 IQCA1Q86XH1 822 aa16.88■□□□□ 0.29
TNFRSF1A-203ENST00000437813 MTMR8Q96EF0 704 aa16.88■□□□□ 0.29
TNFRSF1A-203ENST00000437813 ALDH8A1Q9H2A2 487 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF1A-203ENST00000437813 TNKSO95271 1327 aa16.88■□□□□ 0.29
TNFRSF1A-203ENST00000437813 GBF1Q92538 1859 aa16.88■□□□□ 0.29
TNFRSF1A-203ENST00000437813 MYO9BQ13459 2157 aa16.88■□□□□ 0.29
TNFRSF1A-203ENST00000437813 VCANP13611 3396 aa16.88■□□□□ 0.29
TNFRSF1A-203ENST00000437813 A6NJR5 290 aa16.87■□□□□ 0.29
TNFRSF1A-203ENST00000437813 ZEB2O60315 1214 aa16.87■□□□□ 0.29
TNFRSF1A-203ENST00000437813 ARIH2O95376 493 aa16.87■□□□□ 0.29
TNFRSF1A-203ENST00000437813 IMMTQ16891 758 aaKnown RBP16.87■□□□□ 0.29
TNFRSF1A-203ENST00000437813 TMEM199Q8N511 208 aa16.87■□□□□ 0.29
TNFRSF1A-203ENST00000437813 MYLIPQ8WY64 445 aa16.87■□□□□ 0.29
TNFRSF1A-203ENST00000437813 HERVK_113Q902F9 699 aa16.87■□□□□ 0.29
TNFRSF1A-203ENST00000437813 HIPK3Q9H422 1215 aa16.87■□□□□ 0.29
TNFRSF1A-203ENST00000437813 JMJD4Q9H9V9 463 aa16.87■□□□□ 0.29
TNFRSF1A-203ENST00000437813 IL23AQ9NPF7 189 aa16.87■□□□□ 0.29
TNFRSF1A-203ENST00000437813 CTNNA3Q9UI47 895 aa16.87■□□□□ 0.29
TNFRSF1A-203ENST00000437813 TRANK1O15050 2925 aa16.86■□□□□ 0.29
TNFRSF1A-203ENST00000437813 NKRFO15226 690 aaKnown RBP eCLIP16.86■□□□□ 0.29
TNFRSF1A-203ENST00000437813 ACRP10323 421 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms