RNA–Protein interactions for RNA: ENST00000437516.1

HLA-N-201, Transcript of major histocompatibility complex, class I, N (pseudogene), humanhuman

BASIC

Gene HLA-N, Length 135 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-N-201ENST00000437516 LRRC1Q9BTT6 524 aa4.78□□□□□ -1.64
HLA-N-201ENST00000437516 CAPS2Q9BXY5 557 aa4.78□□□□□ -1.64
HLA-N-201ENST00000437516 TRIM9Q9C026 710 aa4.78□□□□□ -1.64
HLA-N-201ENST00000437516 LRRC27Q9C0I9 530 aa4.78□□□□□ -1.64
HLA-N-201ENST00000437516 TMEM60Q9H2L4 133 aa4.78□□□□□ -1.64
HLA-N-201ENST00000437516 SH2D4AQ9H788 454 aa4.78□□□□□ -1.64
HLA-N-201ENST00000437516 YY1AP1Q9H869 796 aa4.78□□□□□ -1.64
HLA-N-201ENST00000437516 JADE2Q9NQC1 790 aa4.78□□□□□ -1.64
HLA-N-201ENST00000437516 BSDC1Q9NW68 430 aaPredicted RBP4.78□□□□□ -1.64
HLA-N-201ENST00000437516 RNF216Q9NWF9 866 aaPredicted RBP4.78□□□□□ -1.64
HLA-N-201ENST00000437516 GOLGA6AQ9NYA3 693 aa4.78□□□□□ -1.64
HLA-N-201ENST00000437516 ARHGAP20Q9P2F6 1191 aa4.78□□□□□ -1.64
HLA-N-201ENST00000437516 LRWD1Q9UFC0 647 aa4.78□□□□□ -1.64
HLA-N-201ENST00000437516 TSKSQ9UJT2 592 aa4.78□□□□□ -1.64
HLA-N-201ENST00000437516 MINPP1Q9UNW1 487 aa4.78□□□□□ -1.64
HLA-N-201ENST00000437516 TFR2Q9UP52 801 aa4.78□□□□□ -1.64
HLA-N-201ENST00000437516 PLAGL2Q9UPG8 496 aa4.78□□□□□ -1.64
HLA-N-201ENST00000437516 SIK3Q9Y2K2 1263 aa4.78□□□□□ -1.64
HLA-N-201ENST00000437516 CICQ96RK0 1608 aaPredicted RBP4.78□□□□□ -1.64
HLA-N-201ENST00000437516 DLEC1Q9Y238 1755 aa4.78□□□□□ -1.64
HLA-N-201ENST00000437516 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.77□□□□□ -1.65
HLA-N-201ENST00000437516 MYO5AQ9Y4I1 1855 aaKnown RBP4.77□□□□□ -1.65
HLA-N-201ENST00000437516 FLT1P17948 1338 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 COL1A1P02452 1464 aaPredicted RBP4.77□□□□□ -1.65
HLA-N-201ENST00000437516 SSU72P8A0A1W2PR75 194 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 MACROD2A1Z1Q3 448 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 GRID2IPA4D2P6 1211 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 PALM3A6NDB9 673 aaPredicted RBP4.77□□□□□ -1.65
HLA-N-201ENST00000437516 PP2D1A8MPX8 630 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 EBAG9O00559 213 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 ZNF263O14978 683 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 EIF3HO15372 352 aaKnown RBP eCLIP4.77□□□□□ -1.65
HLA-N-201ENST00000437516 NMT2O60551 498 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 ZMYND10O75800 440 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 MOCS3O95396 460 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 CYP2D6P10635 497 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 SMARCA1P28370 1054 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 EIF4A3P38919 411 aaKnown RBP4.77□□□□□ -1.65
HLA-N-201ENST00000437516 CRKLP46109 303 aaKnown RBP4.77□□□□□ -1.65
HLA-N-201ENST00000437516 GTF2A1P52655 376 aaPredicted RBP4.77□□□□□ -1.65
HLA-N-201ENST00000437516 KIF11P52732 1056 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 GNGT1P63211 74 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 ASIC1P78348 528 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 MECOMQ03112 1051 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 NONOQ15233 471 aaKnown RBP eCLIP4.77□□□□□ -1.65
HLA-N-201ENST00000437516 TXNRD1Q16881 649 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 INF2Q27J81 1249 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 CCDC96Q2M329 555 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 SLC10A5Q5PT55 438 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 CCDC181Q5TID7 509 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 C12orf60Q5U649 245 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 ICE2Q659A1 982 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 HAUS3Q68CZ6 603 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 SPTY2D1Q68D10 685 aaPredicted RBP4.77□□□□□ -1.65
HLA-N-201ENST00000437516 PDXDC1Q6P996 788 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 UNC13DQ70J99 1090 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 B4GALNT4Q76KP1 1039 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 SV2BQ7L1I2 683 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 TADA2BQ86TJ2 420 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 PACS2Q86VP3 889 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 SPATS2Q86XZ4 545 aaKnown RBP4.77□□□□□ -1.65
HLA-N-201ENST00000437516 POTEDQ86YR6 584 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 CD302Q8IX05 232 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 IFT20Q8IY31 132 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 GSPT2Q8IYD1 628 aaKnown RBP4.77□□□□□ -1.65
HLA-N-201ENST00000437516 MICALL1Q8N3F8 863 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 STAG2Q8N3U4 1231 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 GUF1Q8N442 669 aaKnown RBP4.77□□□□□ -1.65
HLA-N-201ENST00000437516 PNMA1Q8ND90 353 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 C1orf131Q8NDD1 294 aaKnown RBP4.77□□□□□ -1.65
HLA-N-201ENST00000437516 RASGRP4Q8TDF6 673 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 SMCR8Q8TEV9 937 aaPredicted RBP4.77□□□□□ -1.65
HLA-N-201ENST00000437516 ZNF384Q8TF68 577 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 RIN2Q8WYP3 895 aaPredicted RBP4.77□□□□□ -1.65
HLA-N-201ENST00000437516 GPKOWQ92917 476 aaPredicted RBP eCLIP4.77□□□□□ -1.65
HLA-N-201ENST00000437516 RUFY1Q96T51 708 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 PLIN2Q99541 437 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 TSG101Q99816 390 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 SPZ1Q9BXG8 430 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 ANKRD2Q9GZV1 360 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 ZMYND12Q9H0C1 365 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 NUCKS1Q9H1E3 243 aaKnown RBP4.77□□□□□ -1.65
HLA-N-201ENST00000437516 NDST4Q9H3R1 872 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 SEMA6BQ9H3T3 888 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 DEF6Q9H4E7 631 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 MLXIPQ9HAP2 919 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 C6orf50Q9HD87 102 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 RIC8AQ9NPQ8 531 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 BARHL2Q9NY43 387 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 SLAIN2Q9P270 581 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 STK17AQ9UEE5 414 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 DMGDHQ9UI17 866 aaKnown RBP4.77□□□□□ -1.65
HLA-N-201ENST00000437516 MAD2L2Q9UI95 211 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 NIP7Q9Y221 180 aaKnown RBP eCLIP4.77□□□□□ -1.65
HLA-N-201ENST00000437516 ZNF652Q9Y2D9 606 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 DUSP10Q9Y6W6 482 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 ROBO3Q96MS0 1386 aa4.77□□□□□ -1.65
HLA-N-201ENST00000437516 ATXN2Q99700 1313 aaKnown RBP4.76□□□□□ -1.65
HLA-N-201ENST00000437516 STRCP1A6NGW2 1772 aa4.76□□□□□ -1.65
HLA-N-201ENST00000437516 SMCO2A6NFE2 343 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms