RNA–Protein interactions for RNA: ENST00000437413.2

SMG1P3-202, Transcript of SMG1 pseudogene 3, humanhuman

TSL 4

Gene SMG1P3, Length 589 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P3-202ENST00000437413 SYNGAP1Q96PV0 1343 aa25.31■■□□□ 1.64
SMG1P3-202ENST00000437413 B4DLN1 442 aa25.3■■□□□ 1.64
SMG1P3-202ENST00000437413 TAL1P17542 331 aaPredicted RBP25.3■■□□□ 1.64
SMG1P3-202ENST00000437413 CAPN2P17655 700 aa25.3■■□□□ 1.64
SMG1P3-202ENST00000437413 MRPL12P52815 198 aaKnown RBP25.3■■□□□ 1.64
SMG1P3-202ENST00000437413 RPS6P62753 249 aaKnown RBP25.3■■□□□ 1.64
SMG1P3-202ENST00000437413 CCL14Q16627 93 aa25.3■■□□□ 1.64
SMG1P3-202ENST00000437413 MAP3K21Q5TCX8 1036 aa25.3■■□□□ 1.64
SMG1P3-202ENST00000437413 PPP1R18Q6NYC8 613 aa25.3■■□□□ 1.64
SMG1P3-202ENST00000437413 TRIM22Q8IYM9 498 aa25.3■■□□□ 1.64
SMG1P3-202ENST00000437413 PIBF1Q8WXW3 757 aa25.3■■□□□ 1.64
SMG1P3-202ENST00000437413 TINF2Q9BSI4 451 aa25.3■■□□□ 1.64
SMG1P3-202ENST00000437413 ASB14A6NK59 587 aa25.29■■□□□ 1.64
SMG1P3-202ENST00000437413 HSD17B4P51659 736 aa25.29■■□□□ 1.64
SMG1P3-202ENST00000437413 ZSCAN31Q96LW9 406 aaPredicted RBP25.29■■□□□ 1.64
SMG1P3-202ENST00000437413 FLRT1Q9NZU1 646 aa25.29■■□□□ 1.64
SMG1P3-202ENST00000437413 RPTORQ8N122 1335 aa25.29■■□□□ 1.64
SMG1P3-202ENST00000437413 SCRN1Q12765 414 aa25.28■■□□□ 1.64
SMG1P3-202ENST00000437413 STK3Q13188 491 aa25.28■■□□□ 1.64
SMG1P3-202ENST00000437413 PFKFB3Q16875 520 aaPredicted RBP25.28■■□□□ 1.64
SMG1P3-202ENST00000437413 LARP6Q9BRS8 491 aaKnown RBP25.28■■□□□ 1.64
SMG1P3-202ENST00000437413 NCOA5Q9HCD5 579 aaKnown RBP25.28■■□□□ 1.64
SMG1P3-202ENST00000437413 HMX1Q9NP08 348 aaPredicted RBP25.28■■□□□ 1.64
SMG1P3-202ENST00000437413 OPLAHO14841 1288 aa25.27■■□□□ 1.64
SMG1P3-202ENST00000437413 CFBP00751 764 aa25.27■■□□□ 1.64
SMG1P3-202ENST00000437413 MCM2P49736 904 aa25.27■■□□□ 1.64
SMG1P3-202ENST00000437413 CNTN2Q02246 1040 aa25.27■■□□□ 1.64
SMG1P3-202ENST00000437413 SSRP1Q08945 709 aaKnown RBP25.27■■□□□ 1.64
SMG1P3-202ENST00000437413 ME3Q16798 604 aa25.27■■□□□ 1.64
SMG1P3-202ENST00000437413 SLC30A10Q6XR72 485 aa25.27■■□□□ 1.64
SMG1P3-202ENST00000437413 HEATR3Q7Z4Q2 680 aa25.27■■□□□ 1.64
SMG1P3-202ENST00000437413 FAM177A1Q8N128 213 aaPredicted RBP25.27■■□□□ 1.64
SMG1P3-202ENST00000437413 CCDC12Q8WUD4 166 aaPredicted RBP25.27■■□□□ 1.64
SMG1P3-202ENST00000437413 GTF3C6Q969F1 213 aa25.27■■□□□ 1.64
SMG1P3-202ENST00000437413 GLT8D2Q9H1C3 349 aa25.27■■□□□ 1.64
SMG1P3-202ENST00000437413 SH2B1Q9NRF2 756 aaPredicted RBP25.27■■□□□ 1.64
SMG1P3-202ENST00000437413 BARHL2Q9NY43 387 aa25.27■■□□□ 1.64
SMG1P3-202ENST00000437413 GCOM1H8Y6P7 765 aaPredicted RBP25.26■■□□□ 1.63
SMG1P3-202ENST00000437413 PIK3CDO00329 1044 aa25.26■■□□□ 1.63
SMG1P3-202ENST00000437413 POLR2MP0CAP2 368 aa25.26■■□□□ 1.63
SMG1P3-202ENST00000437413 SCG2P13521 617 aa25.26■■□□□ 1.63
SMG1P3-202ENST00000437413 PRKAR2AP13861 404 aaKnown RBP25.26■■□□□ 1.63
SMG1P3-202ENST00000437413 CALML3P27482 149 aa25.26■■□□□ 1.63
SMG1P3-202ENST00000437413 CACNB2Q08289 660 aaPredicted RBP25.26■■□□□ 1.63
SMG1P3-202ENST00000437413 CUL5Q93034 780 aa25.26■■□□□ 1.63
SMG1P3-202ENST00000437413 FGD4Q96M96 766 aa25.26■■□□□ 1.63
SMG1P3-202ENST00000437413 CNPY2Q9Y2B0 182 aa25.26■■□□□ 1.63
SMG1P3-202ENST00000437413 LCTP09848 1927 aa25.25■■□□□ 1.63
SMG1P3-202ENST00000437413 SOWAHBA6NEL2 793 aa25.25■■□□□ 1.63
SMG1P3-202ENST00000437413 CYP2C19P33261 490 aa25.25■■□□□ 1.63
SMG1P3-202ENST00000437413 SYTL5Q8TDW5 730 aaPredicted RBP25.25■■□□□ 1.63
SMG1P3-202ENST00000437413 MORC4Q8TE76 937 aa25.25■■□□□ 1.63
SMG1P3-202ENST00000437413 PHKBQ93100 1093 aa25.25■■□□□ 1.63
SMG1P3-202ENST00000437413 TMEM106CQ9BVX2 250 aa25.25■■□□□ 1.63
SMG1P3-202ENST00000437413 SLC26A6Q9BXS9 759 aa25.25■■□□□ 1.63
SMG1P3-202ENST00000437413 STK36Q9NRP7 1315 aa25.24■■□□□ 1.63
SMG1P3-202ENST00000437413 hCG_1642624A0A1W2PR95 340 aa25.24■■□□□ 1.63
SMG1P3-202ENST00000437413 DEXIO95424 95 aa25.24■■□□□ 1.63
SMG1P3-202ENST00000437413 CCL5P13501 91 aa25.24■■□□□ 1.63
SMG1P3-202ENST00000437413 ALDH5A1P51649 535 aaPredicted RBP25.24■■□□□ 1.63
SMG1P3-202ENST00000437413 NAPAP54920 295 aa25.24■■□□□ 1.63
SMG1P3-202ENST00000437413 WWC2Q6AWC2 1192 aa25.24■■□□□ 1.63
SMG1P3-202ENST00000437413 NOL8Q76FK4 1167 aaKnown RBP25.24■■□□□ 1.63
SMG1P3-202ENST00000437413 NSUN6Q8TEA1 469 aaKnown RBP25.24■■□□□ 1.63
SMG1P3-202ENST00000437413 ABHD16BQ9H3Z7 469 aa25.24■■□□□ 1.63
SMG1P3-202ENST00000437413 MSCO60682 206 aa25.23■■□□□ 1.63
SMG1P3-202ENST00000437413 CYBAP13498 195 aa25.23■■□□□ 1.63
SMG1P3-202ENST00000437413 TRIM32Q13049 653 aa25.23■■□□□ 1.63
SMG1P3-202ENST00000437413 ARMCX2Q7L311 632 aa25.23■■□□□ 1.63
SMG1P3-202ENST00000437413 CCDC148Q8NFR7 591 aa25.23■■□□□ 1.63
SMG1P3-202ENST00000437413 TBC1D5Q92609 795 aa25.23■■□□□ 1.63
SMG1P3-202ENST00000437413 IWS1Q96ST2 819 aa25.23■■□□□ 1.63
SMG1P3-202ENST00000437413 RNF208Q9H0X6 261 aa25.23■■□□□ 1.63
SMG1P3-202ENST00000437413 PSTPIP2Q9H939 334 aa25.23■■□□□ 1.63
SMG1P3-202ENST00000437413 PAK6Q9NQU5 681 aaPredicted RBP25.23■■□□□ 1.63
SMG1P3-202ENST00000437413 SH3GLB2Q9NR46 395 aa25.23■■□□□ 1.63
SMG1P3-202ENST00000437413 ESYT2A0FGR8 921 aa25.22■■□□□ 1.63
SMG1P3-202ENST00000437413 STXBP3O00186 592 aa25.22■■□□□ 1.63
SMG1P3-202ENST00000437413 MTFR1Q15390 333 aa25.22■■□□□ 1.63
SMG1P3-202ENST00000437413 PKN1Q16512 942 aa25.22■■□□□ 1.63
SMG1P3-202ENST00000437413 GPKOWQ92917 476 aaPredicted RBP eCLIP25.22■■□□□ 1.63
SMG1P3-202ENST00000437413 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.22■■□□□ 1.637e-9■■■■□ 21.4
SMG1P3-202ENST00000437413 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.22■■□□□ 1.63
SMG1P3-202ENST00000437413 ASTN1O14525 1302 aa25.21■■□□□ 1.63
SMG1P3-202ENST00000437413 GJB1P08034 283 aa25.21■■□□□ 1.63
SMG1P3-202ENST00000437413 EDNRBP24530 442 aa25.21■■□□□ 1.63
SMG1P3-202ENST00000437413 MCTP2Q6DN12 878 aa25.21■■□□□ 1.63
SMG1P3-202ENST00000437413 SMARCC2Q8TAQ2 1214 aa25.21■■□□□ 1.63
SMG1P3-202ENST00000437413 WASF1Q92558 559 aa25.21■■□□□ 1.63
SMG1P3-202ENST00000437413 RMDN3Q96TC7 470 aa25.21■■□□□ 1.63
SMG1P3-202ENST00000437413 UNC93B1Q9H1C4 597 aa25.21■■□□□ 1.63
SMG1P3-202ENST00000437413 RIC8AQ9NPQ8 531 aa25.21■■□□□ 1.63
SMG1P3-202ENST00000437413 LARGE1O95461 756 aa25.2■■□□□ 1.62
SMG1P3-202ENST00000437413 SNAI1O95863 264 aaPredicted RBP25.2■■□□□ 1.62
SMG1P3-202ENST00000437413 LLPHQ9BRT6 129 aaKnown RBP25.2■■□□□ 1.62
SMG1P3-202ENST00000437413 VTA1Q9NP79 307 aa25.2■■□□□ 1.62
SMG1P3-202ENST00000437413 CCDC85CA6NKD9 419 aa25.19■■□□□ 1.62
SMG1P3-202ENST00000437413 MEIS2O14770 477 aa25.19■■□□□ 1.62
SMG1P3-202ENST00000437413 SEPT4O43236 478 aa25.19■■□□□ 1.62
SMG1P3-202ENST00000437413 XBP1P17861 261 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms