RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 ZNF215Q9UL58 517 aaPredicted RBP17.37■□□□□ 0.37
PTPN13-204ENST00000436978 MAN1A1P33908 653 aa17.37■□□□□ 0.37
PTPN13-204ENST00000436978 PTGDRQ13258 359 aa17.37■□□□□ 0.37
PTPN13-204ENST00000436978 M0R2C6 588 aa17.37■□□□□ 0.37
PTPN13-204ENST00000436978 GSPT1P15170 499 aaKnown RBP17.37■□□□□ 0.37
PTPN13-204ENST00000436978 BBOF1Q8ND07 529 aa17.37■□□□□ 0.37
PTPN13-204ENST00000436978 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.37■□□□□ 0.37
PTPN13-204ENST00000436978 CACTINQ8WUQ7 758 aaKnown RBP17.37■□□□□ 0.37
PTPN13-204ENST00000436978 MRRFQ96E11 262 aaKnown RBP17.37■□□□□ 0.37
PTPN13-204ENST00000436978 PHKA1P46020 1223 aa17.37■□□□□ 0.37
PTPN13-204ENST00000436978 RASSF2P50749 326 aa17.37■□□□□ 0.37
PTPN13-204ENST00000436978 CC2D2BQ6DHV5 1058 aa17.37■□□□□ 0.37
PTPN13-204ENST00000436978 CEP57Q86XR8 500 aa17.37■□□□□ 0.37
PTPN13-204ENST00000436978 CMTR1Q8N1G2 835 aaKnown RBP17.37■□□□□ 0.37
PTPN13-204ENST00000436978 WDR11Q9BZH6 1224 aa17.37■□□□□ 0.37
PTPN13-204ENST00000436978 IFT122Q9HBG6 1241 aa17.37■□□□□ 0.37
PTPN13-204ENST00000436978 TRMT44Q8IYL2 757 aaKnown RBP17.37■□□□□ 0.37
PTPN13-204ENST00000436978 SERPINB2P05120 415 aa17.37■□□□□ 0.37
PTPN13-204ENST00000436978 GPATCH11Q8N954 259 aa17.37■□□□□ 0.37
PTPN13-204ENST00000436978 SPATA31E1Q6ZUB1 1445 aa17.36■□□□□ 0.37
PTPN13-204ENST00000436978 AFG3L2Q9Y4W6 797 aa17.36■□□□□ 0.37
PTPN13-204ENST00000436978 PLEKHG2Q9H7P9 1386 aa17.36■□□□□ 0.37
PTPN13-204ENST00000436978 RTKN2Q8IZC4 609 aa17.36■□□□□ 0.37
PTPN13-204ENST00000436978 NLRC4Q9NPP4 1024 aa17.36■□□□□ 0.37
PTPN13-204ENST00000436978 ADAM9Q13443 819 aa17.36■□□□□ 0.37
PTPN13-204ENST00000436978 XPO4Q9C0E2 1151 aaKnown RBP17.36■□□□□ 0.37
PTPN13-204ENST00000436978 E9PCH4 1651 aa17.36■□□□□ 0.37
PTPN13-204ENST00000436978 DLATP10515 647 aaKnown RBP17.36■□□□□ 0.37
PTPN13-204ENST00000436978 MFAP3P55082 362 aa17.36■□□□□ 0.37
PTPN13-204ENST00000436978 SUGCTQ9HAC7 445 aa17.36■□□□□ 0.37
PTPN13-204ENST00000436978 PDIA3P30101 505 aaKnown RBP17.36■□□□□ 0.37
PTPN13-204ENST00000436978 VPS37BQ9H9H4 285 aa17.36■□□□□ 0.37
PTPN13-204ENST00000436978 ZNF131P52739 623 aa17.36■□□□□ 0.37
PTPN13-204ENST00000436978 LMNB2Q03252 620 aa17.36■□□□□ 0.37
PTPN13-204ENST00000436978 SETBP1Q9Y6X0 1596 aa17.36■□□□□ 0.37
PTPN13-204ENST00000436978 A6NJR5 290 aa17.35■□□□□ 0.37
PTPN13-204ENST00000436978 IREB2P48200 963 aaKnown RBP17.35■□□□□ 0.37
PTPN13-204ENST00000436978 ERFEQ4G0M1 354 aa17.35■□□□□ 0.37
PTPN13-204ENST00000436978 HYOU1Q9Y4L1 999 aa17.35■□□□□ 0.37
PTPN13-204ENST00000436978 ARHGAP25P42331 645 aa17.35■□□□□ 0.37
PTPN13-204ENST00000436978 SEPT2Q15019 361 aa17.35■□□□□ 0.37
PTPN13-204ENST00000436978 AKT3Q9Y243 479 aa17.35■□□□□ 0.37
PTPN13-204ENST00000436978 PTCH1Q13635 1447 aa17.35■□□□□ 0.37
PTPN13-204ENST00000436978 NDUFAB1O14561 156 aa17.35■□□□□ 0.37
PTPN13-204ENST00000436978 ADORA1P30542 326 aa17.35■□□□□ 0.37
PTPN13-204ENST00000436978 SCRN1Q12765 414 aa17.35■□□□□ 0.37
PTPN13-204ENST00000436978 CCDC93Q567U6 631 aa17.35■□□□□ 0.37
PTPN13-204ENST00000436978 RNF169Q8NCN4 708 aa17.35■□□□□ 0.37
PTPN13-204ENST00000436978 PODXL2Q9NZ53 605 aa17.35■□□□□ 0.37
PTPN13-204ENST00000436978 ASAP1Q9ULH1 1129 aa17.35■□□□□ 0.37
PTPN13-204ENST00000436978 KRIT1O00522 736 aa17.35■□□□□ 0.37
PTPN13-204ENST00000436978 ADD2P35612 726 aa17.35■□□□□ 0.37
PTPN13-204ENST00000436978 SH2D4BQ5SQS7 431 aa17.35■□□□□ 0.37
PTPN13-204ENST00000436978 ABI1Q8IZP0 508 aa17.35■□□□□ 0.37
PTPN13-204ENST00000436978 KIAA1024Q9UPX6 916 aa17.35■□□□□ 0.37
PTPN13-204ENST00000436978 ZNF233A6NK53 670 aa17.35■□□□□ 0.37
PTPN13-204ENST00000436978 IRX5P78411 483 aaPredicted RBP17.35■□□□□ 0.37
PTPN13-204ENST00000436978 DALRD3Q5D0E6 543 aaKnown RBP17.35■□□□□ 0.37
PTPN13-204ENST00000436978 EDC3Q96F86 508 aaKnown RBP17.35■□□□□ 0.37
PTPN13-204ENST00000436978 USP17L3A6NCW0 530 aa17.35■□□□□ 0.37
PTPN13-204ENST00000436978 USP17L4A6NCW7 530 aa17.35■□□□□ 0.37
PTPN13-204ENST00000436978 SPATA1Q5VX52 437 aa17.35■□□□□ 0.37
PTPN13-204ENST00000436978 USP17L1Q7RTZ2 530 aa17.35■□□□□ 0.37
PTPN13-204ENST00000436978 KIF20BQ96Q89 1820 aa17.35■□□□□ 0.37
PTPN13-204ENST00000436978 GTF2A1P52655 376 aaPredicted RBP17.34■□□□□ 0.37
PTPN13-204ENST00000436978 FAM173BQ6P4H8 233 aa17.34■□□□□ 0.37
PTPN13-204ENST00000436978 SLC7A3Q8WY07 619 aa17.34■□□□□ 0.37
PTPN13-204ENST00000436978 LARP4BQ92615 738 aaKnown RBP17.34■□□□□ 0.37
PTPN13-204ENST00000436978 PI4KBQ9UBF8 816 aa17.34■□□□□ 0.37
PTPN13-204ENST00000436978 ALKQ9UM73 1620 aa17.34■□□□□ 0.37
PTPN13-204ENST00000436978 PNMA3Q9UL41 463 aa17.34■□□□□ 0.37
PTPN13-204ENST00000436978 RIOK3O14730 519 aaKnown RBP17.34■□□□□ 0.37
PTPN13-204ENST00000436978 GOLGA8HP0CJ92 632 aa17.34■□□□□ 0.37
PTPN13-204ENST00000436978 SRGAP2BP0DMP2 458 aa17.34■□□□□ 0.37
PTPN13-204ENST00000436978 METTL23Q86XA0 190 aa17.34■□□□□ 0.37
PTPN13-204ENST00000436978 CARD6Q9BX69 1037 aa17.34■□□□□ 0.37
PTPN13-204ENST00000436978 ROBO2Q9HCK4 1378 aa17.34■□□□□ 0.37
PTPN13-204ENST00000436978 RAB3IPQ96QF0 476 aaPredicted RBP17.34■□□□□ 0.37
PTPN13-204ENST00000436978 TMEM206Q9H813 350 aa17.34■□□□□ 0.37
PTPN13-204ENST00000436978 PTK2Q05397 1052 aa17.34■□□□□ 0.37
PTPN13-204ENST00000436978 NUF2Q9BZD4 464 aa17.34■□□□□ 0.37
PTPN13-204ENST00000436978 LSG1Q9H089 658 aaKnown RBP17.34■□□□□ 0.37
PTPN13-204ENST00000436978 HMGB1P1B2RPK0 211 aaPredicted RBP17.34■□□□□ 0.37
PTPN13-204ENST00000436978 ABCB4P21439 1286 aa17.34■□□□□ 0.37
PTPN13-204ENST00000436978 NSFP46459 744 aaKnown RBP17.34■□□□□ 0.37
PTPN13-204ENST00000436978 DHTKD1Q96HY7 919 aaPredicted RBP17.34■□□□□ 0.37
PTPN13-204ENST00000436978 STK17AQ9UEE5 414 aa17.34■□□□□ 0.37
PTPN13-204ENST00000436978 SERPINB13Q9UIV8 391 aa17.34■□□□□ 0.37
PTPN13-204ENST00000436978 ERCC3P19447 782 aa17.34■□□□□ 0.37
PTPN13-204ENST00000436978 EXOC3L4Q17RC7 722 aa17.34■□□□□ 0.37
PTPN13-204ENST00000436978 STAMQ92783 540 aa17.34■□□□□ 0.37
PTPN13-204ENST00000436978 ODR4Q5SWX8 454 aa17.33■□□□□ 0.37
PTPN13-204ENST00000436978 UNC5CLQ8IV45 518 aa17.33■□□□□ 0.37
PTPN13-204ENST00000436978 HNRNPDLO14979 420 aaKnown RBP17.33■□□□□ 0.37
PTPN13-204ENST00000436978 RNF8O76064 485 aa17.33■□□□□ 0.37
PTPN13-204ENST00000436978 RPUSD2Q8IZ73 545 aaKnown RBP17.33■□□□□ 0.37
PTPN13-204ENST00000436978 ACCSQ96QU6 501 aa17.33■□□□□ 0.37
PTPN13-204ENST00000436978 KCNK3O14649 394 aa17.33■□□□□ 0.36
PTPN13-204ENST00000436978 RGS16O15492 202 aaPredicted RBP17.33■□□□□ 0.36
PTPN13-204ENST00000436978 CDC25BP30305 580 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms