RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 UBE2SQ16763 222 aa13.39□□□□□ -0.27
UBE3B-203ENST00000434735 ADALQ6DHV7 355 aa13.39□□□□□ -0.27
UBE3B-203ENST00000434735 PRPF38AQ8NAV1 312 aaKnown RBP13.39□□□□□ -0.27
UBE3B-203ENST00000434735 SRGAP2BP0DMP2 458 aa13.39□□□□□ -0.27
UBE3B-203ENST00000434735 ITPK1Q13572 414 aa13.39□□□□□ -0.27
UBE3B-203ENST00000434735 GIMAP6Q6P9H5 292 aa13.39□□□□□ -0.27
UBE3B-203ENST00000434735 SCN4BQ8IWT1 228 aa13.39□□□□□ -0.27
UBE3B-203ENST00000434735 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.39□□□□□ -0.27
UBE3B-203ENST00000434735 CAVIN2O95810 425 aa13.39□□□□□ -0.27
UBE3B-203ENST00000434735 ALDH1A1P00352 501 aa13.39□□□□□ -0.27
UBE3B-203ENST00000434735 COPB2P35606 906 aa13.39□□□□□ -0.27
UBE3B-203ENST00000434735 ZNF280CQ8ND82 737 aa13.39□□□□□ -0.27
UBE3B-203ENST00000434735 GLIS2Q9BZE0 524 aaPredicted RBP13.39□□□□□ -0.27
UBE3B-203ENST00000434735 POLR2DO15514 142 aaKnown RBP13.39□□□□□ -0.27
UBE3B-203ENST00000434735 TXNP10599 105 aaKnown RBP13.39□□□□□ -0.27
UBE3B-203ENST00000434735 CSGALNACT2Q8N6G5 542 aa13.39□□□□□ -0.27
UBE3B-203ENST00000434735 RNF208Q9H0X6 261 aa13.39□□□□□ -0.27
UBE3B-203ENST00000434735 PIK3CAP42336 1068 aa13.38□□□□□ -0.27
UBE3B-203ENST00000434735 CCT6BQ92526 530 aa13.38□□□□□ -0.27
UBE3B-203ENST00000434735 FAM107BQ9H098 131 aa13.38□□□□□ -0.27
UBE3B-203ENST00000434735 DACT1Q9NYF0 836 aa13.38□□□□□ -0.27
UBE3B-203ENST00000434735 CGNQ9P2M7 1197 aaKnown RBP13.38□□□□□ -0.27
UBE3B-203ENST00000434735 TSKSQ9UJT2 592 aa13.38□□□□□ -0.27
UBE3B-203ENST00000434735 ATP8B3O60423 1300 aa13.38□□□□□ -0.27
UBE3B-203ENST00000434735 SLC4A1P02730 911 aa13.38□□□□□ -0.27
UBE3B-203ENST00000434735 CYP2E1P05181 493 aaPredicted RBP13.38□□□□□ -0.27
UBE3B-203ENST00000434735 ARHGAP4P98171 946 aa13.38□□□□□ -0.27
UBE3B-203ENST00000434735 PAIP2Q9BPZ3 127 aaKnown RBP13.38□□□□□ -0.27
UBE3B-203ENST00000434735 TLR7Q9NYK1 1049 aaKnown RBP13.38□□□□□ -0.27
UBE3B-203ENST00000434735 DBNLQ9UJU6 430 aaKnown RBP13.38□□□□□ -0.27
UBE3B-203ENST00000434735 KIF24Q5T7B8 1368 aa13.38□□□□□ -0.27
UBE3B-203ENST00000434735 F13A1P00488 732 aa13.38□□□□□ -0.27
UBE3B-203ENST00000434735 UBE2HP62256 183 aa13.38□□□□□ -0.27
UBE3B-203ENST00000434735 PLCB4Q15147 1175 aa13.38□□□□□ -0.27
UBE3B-203ENST00000434735 RASGRP4Q8TDF6 673 aa13.38□□□□□ -0.27
UBE3B-203ENST00000434735 C1orf112Q9NSG2 853 aa13.38□□□□□ -0.27
UBE3B-203ENST00000434735 SLC12A6Q9UHW9 1150 aa13.38□□□□□ -0.27
UBE3B-203ENST00000434735 ZNF18P17022 549 aa13.38□□□□□ -0.27
UBE3B-203ENST00000434735 ANAPC4Q9UJX5 808 aa13.38□□□□□ -0.27
UBE3B-203ENST00000434735 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.38□□□□□ -0.27
UBE3B-203ENST00000434735 A0A0D9SFI3 127 aa13.38□□□□□ -0.27
UBE3B-203ENST00000434735 HSF2BPO75031 334 aa13.38□□□□□ -0.27
UBE3B-203ENST00000434735 CYP2D6P10635 497 aa13.38□□□□□ -0.27
UBE3B-203ENST00000434735 ATP2A2P16615 1042 aaKnown RBP13.38□□□□□ -0.27
UBE3B-203ENST00000434735 FMNL3Q8IVF7 1028 aa13.38□□□□□ -0.27
UBE3B-203ENST00000434735 THEM5Q8N1Q8 247 aa13.38□□□□□ -0.27
UBE3B-203ENST00000434735 WDR11Q9BZH6 1224 aa13.38□□□□□ -0.27
UBE3B-203ENST00000434735 TMEM39BQ9GZU3 492 aa13.38□□□□□ -0.27
UBE3B-203ENST00000434735 BLZF1Q9H2G9 400 aa13.38□□□□□ -0.27
UBE3B-203ENST00000434735 PPANQ9NQ55 473 aaKnown RBP13.38□□□□□ -0.27
UBE3B-203ENST00000434735 CPSF3Q9UKF6 684 aaKnown RBP13.38□□□□□ -0.27
UBE3B-203ENST00000434735 TPCN1Q9ULQ1 816 aa13.38□□□□□ -0.27
UBE3B-203ENST00000434735 MYOCDQ8IZQ8 938 aa13.37□□□□□ -0.27
UBE3B-203ENST00000434735 CACTINQ8WUQ7 758 aaKnown RBP13.37□□□□□ -0.27
UBE3B-203ENST00000434735 TIGD1Q96MW7 591 aa13.37□□□□□ -0.27
UBE3B-203ENST00000434735 PFDN4Q9NQP4 134 aa13.37□□□□□ -0.27
UBE3B-203ENST00000434735 PLEKHG2Q9H7P9 1386 aa13.37□□□□□ -0.27
UBE3B-203ENST00000434735 CPB1P15086 417 aa13.37□□□□□ -0.27
UBE3B-203ENST00000434735 COG2Q14746 738 aa13.37□□□□□ -0.27
UBE3B-203ENST00000434735 AOPEPQ8N6M6 819 aa13.37□□□□□ -0.27
UBE3B-203ENST00000434735 RNF139Q8WU17 664 aa13.37□□□□□ -0.27
UBE3B-203ENST00000434735 ERO1AQ96HE7 468 aa13.37□□□□□ -0.27
UBE3B-203ENST00000434735 KIAA1024Q9UPX6 916 aa13.37□□□□□ -0.27
UBE3B-203ENST00000434735 AFG3L2Q9Y4W6 797 aa13.37□□□□□ -0.27
UBE3B-203ENST00000434735 BCRP11274 1271 aa13.37□□□□□ -0.27
UBE3B-203ENST00000434735 GIMAP8Q8ND71 665 aaPredicted RBP13.37□□□□□ -0.27
UBE3B-203ENST00000434735 TBC1D31Q96DN5 1066 aa13.37□□□□□ -0.27
UBE3B-203ENST00000434735 NXF1Q9UBU9 619 aaKnown RBP13.37□□□□□ -0.27
UBE3B-203ENST00000434735 ESPNB1AK53 854 aa13.37□□□□□ -0.27
UBE3B-203ENST00000434735 OR52Z1P0C646 297 aa13.37□□□□□ -0.27
UBE3B-203ENST00000434735 NEDD9Q14511 834 aa13.37□□□□□ -0.27
UBE3B-203ENST00000434735 PPP1R7Q15435 360 aa13.37□□□□□ -0.27
UBE3B-203ENST00000434735 GLYCTKQ8IVS8 523 aa13.37□□□□□ -0.27
UBE3B-203ENST00000434735 PRPF31Q8WWY3 499 aaKnown RBP13.37□□□□□ -0.27
UBE3B-203ENST00000434735 SMC6Q96SB8 1091 aa13.37□□□□□ -0.27
UBE3B-203ENST00000434735 SEPT10Q9P0V9 454 aa13.37□□□□□ -0.27
UBE3B-203ENST00000434735 RGL2O15211 777 aa13.36□□□□□ -0.27
UBE3B-203ENST00000434735 RGS2P41220 211 aa13.36□□□□□ -0.27
UBE3B-203ENST00000434735 ZSCAN30Q86W11 494 aa13.36□□□□□ -0.27
UBE3B-203ENST00000434735 MEIS1O00470 390 aa13.36□□□□□ -0.27
UBE3B-203ENST00000434735 PER1O15534 1290 aaPredicted RBP13.36□□□□□ -0.27
UBE3B-203ENST00000434735 PCP11498 1178 aaKnown RBP13.36□□□□□ -0.27
UBE3B-203ENST00000434735 ADD1P35611 737 aaKnown RBP13.36□□□□□ -0.27
UBE3B-203ENST00000434735 MTMR1Q13613 665 aa13.36□□□□□ -0.27
UBE3B-203ENST00000434735 RUFY4Q6ZNE9 571 aa13.36□□□□□ -0.27
UBE3B-203ENST00000434735 NME8Q8N427 588 aa13.36□□□□□ -0.27
UBE3B-203ENST00000434735 STMN4Q9H169 189 aaPredicted RBP13.36□□□□□ -0.27
UBE3B-203ENST00000434735 MYO1AQ9UBC5 1043 aa13.36□□□□□ -0.27
UBE3B-203ENST00000434735 RNF17Q9BXT8 1623 aaKnown RBP13.36□□□□□ -0.27
UBE3B-203ENST00000434735 NEMP1O14524 444 aa13.36□□□□□ -0.27
UBE3B-203ENST00000434735 MYBP10242 640 aa13.36□□□□□ -0.27
UBE3B-203ENST00000434735 CUL4BQ13620 913 aa13.36□□□□□ -0.27
UBE3B-203ENST00000434735 CCDC84Q86UT8 332 aaPredicted RBP13.36□□□□□ -0.27
UBE3B-203ENST00000434735 NSRP1Q9H0G5 558 aaKnown RBP13.36□□□□□ -0.27
UBE3B-203ENST00000434735 PIH1D3Q9NQM4 214 aaKnown RBP13.36□□□□□ -0.27
UBE3B-203ENST00000434735 RAG1P15918 1043 aa13.36□□□□□ -0.27
UBE3B-203ENST00000434735 GNG11P61952 73 aa13.36□□□□□ -0.27
UBE3B-203ENST00000434735 KRT81Q14533 505 aa13.36□□□□□ -0.27
UBE3B-203ENST00000434735 CASC4Q6P4E1 433 aa13.36□□□□□ -0.27
UBE3B-203ENST00000434735 THNSL1Q8IYQ7 743 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms