RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 NOVP48745 357 aa9.85□□□□□ -0.83
CDH13-203ENST00000431540 STAT2P52630 851 aa9.85□□□□□ -0.83
CDH13-203ENST00000431540 TMEM240Q5SV17 173 aa9.85□□□□□ -0.83
CDH13-203ENST00000431540 ARMCX2Q7L311 632 aa9.85□□□□□ -0.83
CDH13-203ENST00000431540 FAM126BQ8IXS8 530 aa9.85□□□□□ -0.83
CDH13-203ENST00000431540 MORC4Q8TE76 937 aa9.85□□□□□ -0.83
CDH13-203ENST00000431540 MYLIPQ8WY64 445 aa9.85□□□□□ -0.83
CDH13-203ENST00000431540 TIFAQ96CG3 184 aa9.85□□□□□ -0.83
CDH13-203ENST00000431540 FAM161BQ96MY7 647 aa9.85□□□□□ -0.83
CDH13-203ENST00000431540 GAS2L1Q99501 681 aaPredicted RBP9.85□□□□□ -0.83
CDH13-203ENST00000431540 KATNBL1Q9H079 304 aa9.85□□□□□ -0.83
CDH13-203ENST00000431540 ACAD9Q9H845 621 aa9.85□□□□□ -0.83
CDH13-203ENST00000431540 IL23AQ9NPF7 189 aa9.85□□□□□ -0.83
CDH13-203ENST00000431540 MSRAQ9UJ68 235 aa9.85□□□□□ -0.83
CDH13-203ENST00000431540 RIPK3Q9Y572 518 aa9.85□□□□□ -0.83
CDH13-203ENST00000431540 EYSQ5T1H1 3165 aa9.84□□□□□ -0.83
CDH13-203ENST00000431540 KPNA6O60684 536 aa9.84□□□□□ -0.83
CDH13-203ENST00000431540 FGBP02675 491 aa9.84□□□□□ -0.83
CDH13-203ENST00000431540 EPHB4P54760 987 aa9.84□□□□□ -0.83
CDH13-203ENST00000431540 TNFAIP2Q03169 654 aa9.84□□□□□ -0.83
CDH13-203ENST00000431540 C16orf59Q7L2K0 433 aa9.84□□□□□ -0.83
CDH13-203ENST00000431540 IFNL3Q8IZI9 196 aa9.84□□□□□ -0.83
CDH13-203ENST00000431540 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.84□□□□□ -0.83
CDH13-203ENST00000431540 VTA1Q9NP79 307 aa9.84□□□□□ -0.83
CDH13-203ENST00000431540 ADD3Q9UEY8 706 aaKnown RBP9.84□□□□□ -0.83
CDH13-203ENST00000431540 GNEQ9Y223 722 aaKnown RBP9.84□□□□□ -0.83
CDH13-203ENST00000431540 COG6Q9Y2V7 657 aa9.84□□□□□ -0.83
CDH13-203ENST00000431540 ARIH1Q9Y4X5 557 aaPredicted RBP9.84□□□□□ -0.83
CDH13-203ENST00000431540 TRIP12Q14669 1992 aaPredicted RBP9.84□□□□□ -0.83
CDH13-203ENST00000431540 TRANK1O15050 2925 aa9.84□□□□□ -0.83
CDH13-203ENST00000431540 SCN10AQ9Y5Y9 1956 aa9.83□□□□□ -0.84
CDH13-203ENST00000431540 BDP1A6H8Y1 2624 aa9.83□□□□□ -0.84
CDH13-203ENST00000431540 CYP2D7A0A087X1C5 515 aa9.83□□□□□ -0.84
CDH13-203ENST00000431540 MINDY4BA8MYZ0 360 aa9.83□□□□□ -0.84
CDH13-203ENST00000431540 B4DLN1 442 aa9.83□□□□□ -0.84
CDH13-203ENST00000431540 TNFRSF10AO00220 468 aa9.83□□□□□ -0.84
CDH13-203ENST00000431540 NKRFO15226 690 aaKnown RBP eCLIP9.83□□□□□ -0.84
CDH13-203ENST00000431540 CTAGE5O15320 804 aa9.83□□□□□ -0.84
CDH13-203ENST00000431540 GPAA1O43292 621 aa9.83□□□□□ -0.84
CDH13-203ENST00000431540 FGRP09769 529 aa9.83□□□□□ -0.84
CDH13-203ENST00000431540 TSPY3P0CV98 308 aa9.83□□□□□ -0.84
CDH13-203ENST00000431540 TSPY8P0CW00 308 aa9.83□□□□□ -0.84
CDH13-203ENST00000431540 PCP11498 1178 aaKnown RBP9.83□□□□□ -0.84
CDH13-203ENST00000431540 MRPL12P52815 198 aaKnown RBP9.83□□□□□ -0.84
CDH13-203ENST00000431540 GRIN2CQ14957 1233 aa9.83□□□□□ -0.84
CDH13-203ENST00000431540 SLFN13Q68D06 897 aa9.83□□□□□ -0.84
CDH13-203ENST00000431540 CLEC10AQ8IUN9 316 aa9.83□□□□□ -0.84
CDH13-203ENST00000431540 CCDC144CPQ8IYA2 1237 aa9.83□□□□□ -0.84
CDH13-203ENST00000431540 OSBP2Q969R2 916 aa9.83□□□□□ -0.84
CDH13-203ENST00000431540 VTI1AQ96AJ9 217 aa9.83□□□□□ -0.84
CDH13-203ENST00000431540 CEP95Q96GE4 821 aa9.83□□□□□ -0.84
CDH13-203ENST00000431540 MPHOSPH6Q99547 160 aaKnown RBP9.83□□□□□ -0.84
CDH13-203ENST00000431540 AP5M1Q9H0R1 490 aa9.83□□□□□ -0.84
CDH13-203ENST00000431540 ANAPC4Q9UJX5 808 aa9.83□□□□□ -0.84
CDH13-203ENST00000431540 ZHX1Q9UKY1 873 aaPredicted RBP9.83□□□□□ -0.84
CDH13-203ENST00000431540 VCANP13611 3396 aa9.82□□□□□ -0.84
CDH13-203ENST00000431540 RBM47A0AV96 593 aaKnown RBP9.82□□□□□ -0.84
CDH13-203ENST00000431540 RAD21O60216 631 aa9.82□□□□□ -0.84
CDH13-203ENST00000431540 PARNO95453 639 aaKnown RBP9.82□□□□□ -0.84
CDH13-203ENST00000431540 RFC2P35250 354 aa9.82□□□□□ -0.84
CDH13-203ENST00000431540 SLC1A4P43007 532 aa9.82□□□□□ -0.84
CDH13-203ENST00000431540 TDO2P48775 406 aa9.82□□□□□ -0.84
CDH13-203ENST00000431540 MRPS5P82675 430 aaKnown RBP9.82□□□□□ -0.84
CDH13-203ENST00000431540 PTPN11Q06124 597 aaPredicted RBP9.82□□□□□ -0.84
CDH13-203ENST00000431540 ITGA7Q13683 1181 aa9.82□□□□□ -0.84
CDH13-203ENST00000431540 ALX1Q15699 326 aa9.82□□□□□ -0.84
CDH13-203ENST00000431540 AAK1Q2M2I8 961 aa9.82□□□□□ -0.84
CDH13-203ENST00000431540 BRDTQ58F21 947 aaPredicted RBP9.82□□□□□ -0.84
CDH13-203ENST00000431540 BTNL9Q6UXG8 535 aa9.82□□□□□ -0.84
CDH13-203ENST00000431540 ZNF365Q70YC5 407 aa9.82□□□□□ -0.84
CDH13-203ENST00000431540 CPXCR1Q8N123 301 aa9.82□□□□□ -0.84
CDH13-203ENST00000431540 RGS22Q8NE09 1264 aa9.82□□□□□ -0.84
CDH13-203ENST00000431540 PHOSPHO2Q8TCD6 241 aa9.82□□□□□ -0.84
CDH13-203ENST00000431540 KIFC2Q96AC6 838 aa9.82□□□□□ -0.84
CDH13-203ENST00000431540 FGD4Q96M96 766 aa9.82□□□□□ -0.84
CDH13-203ENST00000431540 TTC14Q96N46 770 aa9.82□□□□□ -0.84
CDH13-203ENST00000431540 PBX4Q9BYU1 374 aa9.82□□□□□ -0.84
CDH13-203ENST00000431540 SLC28A3Q9HAS3 691 aa9.82□□□□□ -0.84
CDH13-203ENST00000431540 RAVER2Q9HCJ3 691 aaKnown RBP9.82□□□□□ -0.84
CDH13-203ENST00000431540 TCP11L1Q9NUJ3 509 aa9.82□□□□□ -0.84
CDH13-203ENST00000431540 POLR3EQ9NVU0 708 aa9.82□□□□□ -0.84
CDH13-203ENST00000431540 RCAN3Q9UKA8 241 aa9.82□□□□□ -0.84
CDH13-203ENST00000431540 PCDHA11Q9Y5I1 949 aa9.82□□□□□ -0.84
CDH13-203ENST00000431540 MYH6P13533 1939 aa9.82□□□□□ -0.84
CDH13-203ENST00000431540 KIAA1217Q5T5P2 1943 aa9.82□□□□□ -0.84
CDH13-203ENST00000431540 CDH23Q9H251 3354 aa9.81□□□□□ -0.84
CDH13-203ENST00000431540 CHD9Q3L8U1 2897 aa9.81□□□□□ -0.84
CDH13-203ENST00000431540 TMEM232C9JQI7 657 aa9.81□□□□□ -0.84
CDH13-203ENST00000431540 APPP05067 770 aa9.81□□□□□ -0.84
CDH13-203ENST00000431540 CSF2RAP15509 400 aa9.81□□□□□ -0.84
CDH13-203ENST00000431540 TFAP4Q01664 338 aa9.81□□□□□ -0.84
CDH13-203ENST00000431540 FSCN1Q16658 493 aaKnown RBP9.81□□□□□ -0.84
CDH13-203ENST00000431540 DUSP28Q4G0W2 176 aa9.81□□□□□ -0.84
CDH13-203ENST00000431540 TRERF1Q96PN7 1200 aa9.81□□□□□ -0.84
CDH13-203ENST00000431540 ASB2Q96Q27 587 aa9.81□□□□□ -0.84
CDH13-203ENST00000431540 A1CFQ9NQ94 594 aaKnown RBP9.81□□□□□ -0.84
CDH13-203ENST00000431540 ZNF536O15090 1300 aa9.81□□□□□ -0.84
CDH13-203ENST00000431540 LCTP09848 1927 aa9.8□□□□□ -0.84
CDH13-203ENST00000431540 ORC4O43929 436 aa9.8□□□□□ -0.84
CDH13-203ENST00000431540 ICAM1P05362 532 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms