RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 CRTC3Q6UUV7 619 aa3.54□□□□□ -1.84
CDC40-204ENST00000431461 ERMP1Q7Z2K6 904 aa3.54□□□□□ -1.84
CDC40-204ENST00000431461 NAT16Q8N8M0 369 aa3.54□□□□□ -1.84
CDC40-204ENST00000431461 SLC6A18Q96N87 628 aa3.54□□□□□ -1.84
CDC40-204ENST00000431461 SSBP3Q9BWW4 388 aaPredicted RBP3.54□□□□□ -1.84
CDC40-204ENST00000431461 SLC12A9Q9BXP2 914 aa3.54□□□□□ -1.84
CDC40-204ENST00000431461 VPS11Q9H270 941 aa3.54□□□□□ -1.84
CDC40-204ENST00000431461 METTL5Q9NRN9 209 aaKnown RBP3.54□□□□□ -1.84
CDC40-204ENST00000431461 KBTBD4Q9NVX7 518 aa3.54□□□□□ -1.84
CDC40-204ENST00000431461 NTMQ9P121 344 aa3.54□□□□□ -1.84
CDC40-204ENST00000431461 HS3ST3A1Q9Y663 406 aa3.54□□□□□ -1.84
CDC40-204ENST00000431461 ZNF536O15090 1300 aa3.53□□□□□ -1.84
CDC40-204ENST00000431461 MEIS3P2A8K0S8 358 aa3.53□□□□□ -1.84
CDC40-204ENST00000431461 F8W031 263 aaPredicted RBP3.53□□□□□ -1.84
CDC40-204ENST00000431461 FGF10O15520 208 aaPredicted RBP3.53□□□□□ -1.84
CDC40-204ENST00000431461 GSTM1P09488 218 aa3.53□□□□□ -1.84
CDC40-204ENST00000431461 NOP2P46087 812 aaKnown RBP3.53□□□□□ -1.84
CDC40-204ENST00000431461 SARSP49591 514 aaKnown RBP3.53□□□□□ -1.84
CDC40-204ENST00000431461 CLCQ05315 142 aa3.53□□□□□ -1.84
CDC40-204ENST00000431461 SMAD4Q13485 552 aaKnown RBP3.53□□□□□ -1.84
CDC40-204ENST00000431461 CYP2R1Q6VVX0 501 aa3.53□□□□□ -1.84
CDC40-204ENST00000431461 LIMS2Q7Z4I7 341 aa3.53□□□□□ -1.84
CDC40-204ENST00000431461 JAMLQ86YT9 394 aa3.53□□□□□ -1.84
CDC40-204ENST00000431461 PALM2Q8IXS6 379 aa3.53□□□□□ -1.84
CDC40-204ENST00000431461 C7orf61Q8IZ16 206 aa3.53□□□□□ -1.84
CDC40-204ENST00000431461 LGI4Q8N135 537 aa3.53□□□□□ -1.84
CDC40-204ENST00000431461 ZNF296Q8WUU4 475 aaPredicted RBP3.53□□□□□ -1.84
CDC40-204ENST00000431461 NOX5Q96PH1 765 aa3.53□□□□□ -1.84
CDC40-204ENST00000431461 COPRSQ9NQ92 184 aa3.53□□□□□ -1.84
CDC40-204ENST00000431461 C11orf21Q9P2W6 132 aa3.53□□□□□ -1.84
CDC40-204ENST00000431461 VTI1BQ9UEU0 232 aa3.53□□□□□ -1.84
CDC40-204ENST00000431461 SHOXO15266 292 aa3.52□□□□□ -1.85
CDC40-204ENST00000431461 AMHP03971 560 aa3.52□□□□□ -1.85
CDC40-204ENST00000431461 ASGR2P07307 311 aa3.52□□□□□ -1.85
CDC40-204ENST00000431461 CRKP46108 304 aa3.52□□□□□ -1.85
CDC40-204ENST00000431461 ZNF165P49910 485 aa3.52□□□□□ -1.85
CDC40-204ENST00000431461 KLF10Q13118 480 aa3.52□□□□□ -1.85
CDC40-204ENST00000431461 SURF1Q15526 300 aa3.52□□□□□ -1.85
CDC40-204ENST00000431461 CWF19L1Q69YN2 538 aaKnown RBP3.52□□□□□ -1.85
CDC40-204ENST00000431461 GLB1LQ6UWU2 654 aa3.52□□□□□ -1.85
CDC40-204ENST00000431461 TTLL7Q6ZT98 887 aa3.52□□□□□ -1.85
CDC40-204ENST00000431461 B3GNT8Q7Z7M8 397 aa3.52□□□□□ -1.85
CDC40-204ENST00000431461 ZNF761Q86XN6 746 aaPredicted RBP3.52□□□□□ -1.85
CDC40-204ENST00000431461 ALG3Q92685 438 aa3.52□□□□□ -1.85
CDC40-204ENST00000431461 DHRS1Q96LJ7 313 aa3.52□□□□□ -1.85
CDC40-204ENST00000431461 SLC9A7Q96T83 725 aa3.52□□□□□ -1.85
CDC40-204ENST00000431461 SEMA4AQ9H3S1 761 aa3.52□□□□□ -1.85
CDC40-204ENST00000431461 SUCOQ9UBS9 1254 aaKnown RBP3.52□□□□□ -1.85
CDC40-204ENST00000431461 SCAMP3O14828 347 aaKnown RBP3.51□□□□□ -1.85
CDC40-204ENST00000431461 TBC1D8O95759 1140 aa3.51□□□□□ -1.85
CDC40-204ENST00000431461 INHBEP58166 350 aa3.51□□□□□ -1.85
CDC40-204ENST00000431461 MRPL58Q14197 206 aaKnown RBP3.51□□□□□ -1.85
CDC40-204ENST00000431461 CDSNQ15517 529 aa3.51□□□□□ -1.85
CDC40-204ENST00000431461 SEZ6Q53EL9 994 aa3.51□□□□□ -1.85
CDC40-204ENST00000431461 BORAQ6PGQ7 559 aa3.51□□□□□ -1.85
CDC40-204ENST00000431461 GK5Q6ZS86 529 aa3.51□□□□□ -1.85
CDC40-204ENST00000431461 USP48Q86UV5 1035 aa3.51□□□□□ -1.85
CDC40-204ENST00000431461 FAM124AQ86V42 546 aa3.51□□□□□ -1.85
CDC40-204ENST00000431461 SMARCC2Q8TAQ2 1214 aa3.51□□□□□ -1.85
CDC40-204ENST00000431461 CPA5Q8WXQ8 436 aa3.51□□□□□ -1.85
CDC40-204ENST00000431461 ZBTB8AQ96BR9 441 aa3.51□□□□□ -1.85
CDC40-204ENST00000431461 SYT3Q9BQG1 590 aa3.51□□□□□ -1.85
CDC40-204ENST00000431461 DSCC1Q9BVC3 393 aa3.51□□□□□ -1.85
CDC40-204ENST00000431461 INVSQ9Y283 1065 aa3.51□□□□□ -1.85
CDC40-204ENST00000431461 FAM86C2PA6NEL3 165 aa3.5□□□□□ -1.85
CDC40-204ENST00000431461 C9IYK1 514 aa3.5□□□□□ -1.85
CDC40-204ENST00000431461 H0Y8X5 98 aa3.5□□□□□ -1.85
CDC40-204ENST00000431461 GLI4P10075 376 aa3.5□□□□□ -1.85
CDC40-204ENST00000431461 PMLP29590 882 aa3.5□□□□□ -1.85
CDC40-204ENST00000431461 L1CAMP32004 1257 aa3.5□□□□□ -1.85
CDC40-204ENST00000431461 MCM4P33991 863 aa3.5□□□□□ -1.85
CDC40-204ENST00000431461 ZNF445P59923 1031 aa3.5□□□□□ -1.85
CDC40-204ENST00000431461 RGL3Q3MIN7 710 aa3.5□□□□□ -1.85
CDC40-204ENST00000431461 ZNF585AQ6P3V2 769 aa3.5□□□□□ -1.85
CDC40-204ENST00000431461 HS2ST1Q7LGA3 356 aa3.5□□□□□ -1.85
CDC40-204ENST00000431461 NPM2Q86SE8 214 aaKnown RBP3.5□□□□□ -1.85
CDC40-204ENST00000431461 SLITRK4Q8IW52 837 aa3.5□□□□□ -1.85
CDC40-204ENST00000431461 CCDC144CPQ8IYA2 1237 aa3.5□□□□□ -1.85
CDC40-204ENST00000431461 SMARCC1Q92922 1105 aaPredicted RBP3.5□□□□□ -1.85
CDC40-204ENST00000431461 MRRFQ96E11 262 aaKnown RBP3.5□□□□□ -1.85
CDC40-204ENST00000431461 TSPAN17Q96FV3 270 aa3.5□□□□□ -1.85
CDC40-204ENST00000431461 PTCHD1Q96NR3 888 aa3.5□□□□□ -1.85
CDC40-204ENST00000431461 FCRL3Q96P31 734 aaPredicted RBP3.5□□□□□ -1.85
CDC40-204ENST00000431461 SPATA6Q9NWH7 488 aaPredicted RBP3.5□□□□□ -1.85
CDC40-204ENST00000431461 UBP1Q9NZI7 540 aa3.5□□□□□ -1.85
CDC40-204ENST00000431461 TNFRSF18Q9Y5U5 241 aa3.5□□□□□ -1.85
CDC40-204ENST00000431461 WDR33Q9C0J8 1336 aaKnown RBP3.49□□□□□ -1.85
CDC40-204ENST00000431461 ACRP10323 421 aa3.49□□□□□ -1.85
CDC40-204ENST00000431461 RBM25P49756 843 aaKnown RBP3.49□□□□□ -1.85
CDC40-204ENST00000431461 SLC9A5Q14940 896 aa3.49□□□□□ -1.85
CDC40-204ENST00000431461 FAM26FQ5R3K3 315 aa3.49□□□□□ -1.85
CDC40-204ENST00000431461 NOL9Q5SY16 702 aaKnown RBP3.49□□□□□ -1.85
CDC40-204ENST00000431461 LINC00482Q8N8I6 264 aa3.49□□□□□ -1.85
CDC40-204ENST00000431461 ADAMTS17Q8TE56 1095 aa3.49□□□□□ -1.85
CDC40-204ENST00000431461 DDX11Q96FC9 970 aa3.49□□□□□ -1.85
CDC40-204ENST00000431461 SPATA32Q96LK8 384 aa3.49□□□□□ -1.85
CDC40-204ENST00000431461 NT5C1AQ9BXI3 368 aa3.49□□□□□ -1.85
CDC40-204ENST00000431461 KLC2Q9H0B6 622 aa3.49□□□□□ -1.85
CDC40-204ENST00000431461 PCDH18Q9HCL0 1135 aa3.49□□□□□ -1.85
CDC40-204ENST00000431461 GP6Q9HCN6 339 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms