RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 TSHZ3Q63HK5 1081 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 SLFN13Q68D06 897 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 TTC23LQ6PF05 361 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 MYLK4Q86YV6 388 aaPredicted RBP6.25□□□□□ -1.41
HERC4-206ENST00000427635 TBC1D19Q8N5T2 526 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 AOPEPQ8N6M6 819 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 GIMAP8Q8ND71 665 aaPredicted RBP6.25□□□□□ -1.41
HERC4-206ENST00000427635 CDKL2Q92772 493 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 DDX50Q9BQ39 737 aaKnown RBP6.25□□□□□ -1.41
HERC4-206ENST00000427635 ZFYVE28Q9HCC9 887 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 VCX3AQ9NNX9 186 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 BICRAQ9NZM4 1560 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 SMCO2A6NFE2 343 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 TMEM232C9JQI7 657 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 INO80B-WBP1J3KQ70 363 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 RNF8O76064 485 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 SERPINB2P05120 415 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 NPR1P16066 1061 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 ATP11AP98196 1134 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 TYRO3Q06418 890 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 SFSWAPQ12872 951 aaKnown RBP6.25□□□□□ -1.41
HERC4-206ENST00000427635 LRMPQ12912 555 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 CACNA2D3Q8IZS8 1091 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 ARFGAP2Q8N6H7 521 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 TEKT4Q8WW24 435 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 SLC7A3Q8WY07 619 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 LZICQ8WZA0 190 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 PBXIP1Q96AQ6 731 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 VPS37BQ9H9H4 285 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 TEKT2Q9UIF3 430 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 LEMD3Q9Y2U8 911 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 THRAP3Q9Y2W1 955 aaKnown RBP6.25□□□□□ -1.41
HERC4-206ENST00000427635 HYOU1Q9Y4L1 999 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 DUOX2Q9NRD8 1548 aa6.25□□□□□ -1.41
HERC4-206ENST00000427635 EIF3CLB5ME19 914 aaKnown RBP6.24□□□□□ -1.41
HERC4-206ENST00000427635 TMCC1O94876 653 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 RRM1P23921 792 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 SLC9C1Q4G0N8 1177 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 DNAJC21Q5F1R6 531 aaKnown RBP6.24□□□□□ -1.41
HERC4-206ENST00000427635 CLEC4GQ6UXB4 293 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 RAPH1Q70E73 1250 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 DYMQ7RTS9 669 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 PHLDB2Q86SQ0 1253 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 PATL1Q86TB9 770 aaKnown RBP6.24□□□□□ -1.41
HERC4-206ENST00000427635 DDX53Q86TM3 631 aaKnown RBP6.24□□□□□ -1.41
HERC4-206ENST00000427635 ENGASEQ8NFI3 743 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 OPTNQ96CV9 577 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 EIF3CQ99613 913 aaKnown RBP6.24□□□□□ -1.41
HERC4-206ENST00000427635 DDX21Q9NR30 783 aaKnown RBP eCLIP6.24□□□□□ -1.41
HERC4-206ENST00000427635 RALGAPBQ86X10 1494 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 USP17L3A6NCW0 530 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 USP17L4A6NCW7 530 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 GSTA4O15217 222 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 EFCAB14O75071 495 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 SAT1P21673 171 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 TBC1D8BQ0IIM8 1120 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 NKX1-1Q15270 411 aaPredicted RBP6.24□□□□□ -1.41
HERC4-206ENST00000427635 SURF1Q15526 300 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 AOC3Q16853 763 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 E4F1Q66K89 784 aaPredicted RBP6.24□□□□□ -1.41
HERC4-206ENST00000427635 ANKS3Q6ZW76 656 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 USP17L1Q7RTZ2 530 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 GPBP1Q86WP2 473 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 CCDC170Q8IYT3 715 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 APPBP2Q92624 585 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 SPATA17Q96L03 361 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 RILPQ96NA2 401 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 TEX12Q9BXU0 123 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 POLR3EQ9NVU0 708 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 SRPRBQ9Y5M8 271 aaKnown RBP6.24□□□□□ -1.41
HERC4-206ENST00000427635 PI4K2BG5E9Z4 385 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 ALDH1A1P00352 501 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 PSAPP07602 524 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 SYT1P21579 422 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 CA4P22748 312 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 RNASE9P60153 205 aaKnown RBP6.24□□□□□ -1.41
HERC4-206ENST00000427635 CTDSPL2Q05D32 466 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 ASPHQ12797 758 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 DPYDQ12882 1025 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 CCDC157Q569K6 752 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 GBP7Q8N8V2 638 aaPredicted RBP6.24□□□□□ -1.41
HERC4-206ENST00000427635 TCP11Q8WWU5 503 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 RMDN2Q96LZ7 410 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 DDX25Q9UHL0 483 aaKnown RBP6.24□□□□□ -1.41
HERC4-206ENST00000427635 FAN1Q9Y2M0 1017 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 PCDHB4Q9Y5E5 795 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 ORC6Q9Y5N6 252 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 ZNF608Q9ULD9 1512 aaPredicted RBP6.24□□□□□ -1.41
HERC4-206ENST00000427635 RBM47A0AV96 593 aaKnown RBP6.24□□□□□ -1.41
HERC4-206ENST00000427635 RAD17O75943 681 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 DDX5P17844 614 aaKnown RBP6.24□□□□□ -1.41
HERC4-206ENST00000427635 NELFCDQ8IXH7 590 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 CCDC13Q8IYE1 715 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 CSGALNACT2Q8N6G5 542 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 CCDC17Q96LX7 622 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 TBX22Q9Y458 520 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 RPS6KL1Q9Y6S9 549 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 HIP1RO75146 1068 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 MNAT1P51948 309 aa6.24□□□□□ -1.41
HERC4-206ENST00000427635 KPNA2P52292 529 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms