RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 SEC16BQ96JE7 1060 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 USP28Q96RU2 1077 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 CENPKQ9BS16 269 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 UNC45AQ9H3U1 944 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 MRPL44Q9H9J2 332 aaKnown RBP6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 TRPV5Q9NQA5 729 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 FANCLQ9NW38 375 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 SLC5A4Q9NY91 659 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 ABCF2Q9UG63 623 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 SLC12A4Q9UP95 1085 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 PHF24Q9UPV7 400 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 NFE2L3Q9Y4A8 694 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 HYOU1Q9Y4L1 999 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 COMMD3-BMI1R4GMX3 469 aa6.19□□□□□ -1.42
VTI1BP4-201ENST00000427516 GPR75-ASB3A0A0A6YYF3 556 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 A0A1B0GVL5 298 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 CCDC162PA2VCL2 907 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 PFDN1O60925 122 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 KIF4AO95239 1232 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 FMNL1O95466 1100 aaPredicted RBP6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 BMP15O95972 392 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 EIF2S1P05198 315 aaKnown RBP6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 MYL1P05976 194 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 ATP1A3P13637 1013 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 IDEP14735 1019 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 ATP6V1C1P21283 382 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 HOXA7P31268 230 aaPredicted RBP6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 ADD1P35611 737 aaKnown RBP6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 PPP1R2P41236 205 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 ACADVLP49748 655 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 SERPINB8P50452 374 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 PPP2R2AP63151 447 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 HDLBPQ00341 1268 aaKnown RBP6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 ZBTB17Q13105 803 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 PRPF4BQ13523 1007 aaKnown RBP6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 TOB2Q14106 344 aaPredicted RBP6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 NR1I3Q14994 352 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 LAPTM4AQ15012 233 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 SLC39A14Q15043 492 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 PUS10Q3MIT2 529 aaKnown RBP6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 GNPTABQ3T906 1256 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 CFAP221Q4G0U5 840 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 ANKRD20A2Q5SQ80 823 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 CCDC122Q5T0U0 273 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 NT5DC1Q5TFE4 455 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 ANKRD20A1Q5TYW2 823 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 EFCAB2Q5VUJ9 269 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 ANKRD20A3Q5VUR7 823 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 MYSM1Q5VVJ2 828 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 USPL1Q5W0Q7 1092 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 Q6ZNB5 142 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 PNMA8AQ86V59 439 aaPredicted RBP6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 SCUBE3Q8IX30 993 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 NME8Q8N427 588 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 NOA1Q8NC60 698 aaKnown RBP6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 PPFIBP2Q8ND30 876 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 ACRBPQ8NEB7 543 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 PIP4K2CQ8TBX8 421 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 PIK3R5Q8WYR1 880 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 CCT6BQ92526 530 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 WASF1Q92558 559 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 TEKT1Q969V4 418 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 SYTL4Q96C24 671 aaPredicted RBP6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 C8orf76Q96K31 380 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 AGAP3Q96P47 875 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 GBP5Q96PP8 586 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 SEC62Q99442 399 aaKnown RBP6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 NUP88Q99567 741 aaPredicted RBP6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 DESI2Q9BSY9 194 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 RAB17Q9H0T7 212 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 SIL1Q9H173 461 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 PHAXQ9H814 394 aaKnown RBP6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 SUGCTQ9HAC7 445 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 JADE2Q9NQC1 790 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 ABHD10Q9NUJ1 306 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 TXLNGQ9NUQ3 528 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 RMND1Q9NWS8 449 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 LMCD1Q9NZU5 365 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 PPP1R1BQ9UD71 204 aaPredicted RBP6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 DDX25Q9UHL0 483 aaKnown RBP6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 SPG7Q9UQ90 795 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 ATP8A1Q9Y2Q0 1164 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 ASB3Q9Y575 518 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 CTDP1Q9Y5B0 961 aaPredicted RBP6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 ZFYVE16Q7Z3T8 1539 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 DLC1Q96QB1 1528 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 WDR19Q8NEZ3 1342 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 SYNRGQ9UMZ2 1314 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 NRKQ7Z2Y5 1582 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 CARMIL3Q8ND23 1372 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 MED23Q9ULK4 1368 aa6.18□□□□□ -1.42
VTI1BP4-201ENST00000427516 MLH3Q9UHC1 1453 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 A0A1W2PQC6 194 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 EME2A4GXA9 379 aaPredicted RBP6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 SOWAHDA6NJG2 315 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 CES2O00748 559 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 LCE2BO14633 110 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 CPLX1O14810 134 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 FANCGO15287 622 aa6.17□□□□□ -1.42
VTI1BP4-201ENST00000427516 PPIP5K2O43314 1243 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms