RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 KDM4AO75164 1064 aa21.68■■□□□ 1.06
SREBF1-206ENST00000423161 GOLGA8HP0CJ92 632 aa21.68■■□□□ 1.06
SREBF1-206ENST00000423161 CALML3P27482 149 aa21.68■■□□□ 1.06
SREBF1-206ENST00000423161 NT5C2P49902 561 aa21.68■■□□□ 1.06
SREBF1-206ENST00000423161 RNF207Q6ZRF8 634 aa21.68■■□□□ 1.06
SREBF1-206ENST00000423161 IQCA1Q86XH1 822 aa21.68■■□□□ 1.06
SREBF1-206ENST00000423161 CDX2Q99626 313 aaPredicted RBP21.68■■□□□ 1.06
SREBF1-206ENST00000423161 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.68■■□□□ 1.067e-14■■■□□ 16.2
SREBF1-206ENST00000423161 DSCC1Q9BVC3 393 aa21.68■■□□□ 1.06
SREBF1-206ENST00000423161 TTYH1Q9H313 450 aaPredicted RBP21.68■■□□□ 1.06
SREBF1-206ENST00000423161 CD4P01730 458 aa21.67■■□□□ 1.06
SREBF1-206ENST00000423161 ITGA7Q13683 1181 aa21.67■■□□□ 1.06
SREBF1-206ENST00000423161 DUSP28Q4G0W2 176 aa21.67■■□□□ 1.06
SREBF1-206ENST00000423161 CCDC178Q5BJE1 867 aa21.67■■□□□ 1.06
SREBF1-206ENST00000423161 TMEM199Q8N511 208 aa21.67■■□□□ 1.06
SREBF1-206ENST00000423161 SLC43A3Q8NBI5 491 aa21.67■■□□□ 1.06
SREBF1-206ENST00000423161 PNMA1Q8ND90 353 aa21.67■■□□□ 1.06
SREBF1-206ENST00000423161 B4E1Z4 1266 aa21.66■■□□□ 1.06
SREBF1-206ENST00000423161 CSF2RAP15509 400 aa21.66■■□□□ 1.06
SREBF1-206ENST00000423161 RPS6P62753 249 aaKnown RBP21.66■■□□□ 1.06
SREBF1-206ENST00000423161 USH1GQ495M9 461 aa21.66■■□□□ 1.06
SREBF1-206ENST00000423161 WDR11Q9BZH6 1224 aa21.66■■□□□ 1.06
SREBF1-206ENST00000423161 UBA5Q9GZZ9 404 aa21.66■■□□□ 1.06
SREBF1-206ENST00000423161 CPVLQ9H3G5 476 aa21.66■■□□□ 1.06
SREBF1-206ENST00000423161 KAT14Q9H8E8 782 aa21.66■■□□□ 1.06
SREBF1-206ENST00000423161 KIAA1217Q5T5P2 1943 aa21.65■■□□□ 1.06
SREBF1-206ENST00000423161 GBF1Q92538 1859 aa21.65■■□□□ 1.06
SREBF1-206ENST00000423161 GRIN2DO15399 1336 aa21.65■■□□□ 1.06
SREBF1-206ENST00000423161 TMEM265A0A087WTH1 108 aa21.65■■□□□ 1.06
SREBF1-206ENST00000423161 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.65■■□□□ 1.06
SREBF1-206ENST00000423161 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.65■■□□□ 1.06
SREBF1-206ENST00000423161 PDE4DQ08499 809 aa21.65■■□□□ 1.06
SREBF1-206ENST00000423161 IMMTQ16891 758 aaKnown RBP21.65■■□□□ 1.06
SREBF1-206ENST00000423161 TMEM240Q5SV17 173 aa21.65■■□□□ 1.06
SREBF1-206ENST00000423161 MPHOSPH6Q99547 160 aaKnown RBP21.65■■□□□ 1.06
SREBF1-206ENST00000423161 SEZ6LQ9BYH1 1024 aa21.65■■□□□ 1.06
SREBF1-206ENST00000423161 CUL9Q8IWT3 2517 aa21.65■■□□□ 1.06
SREBF1-206ENST00000423161 SCN10AQ9Y5Y9 1956 aa21.65■■□□□ 1.06
SREBF1-206ENST00000423161 CYP2C18P33260 490 aa21.64■■□□□ 1.05
SREBF1-206ENST00000423161 PSMC6P62333 389 aa21.64■■□□□ 1.05
SREBF1-206ENST00000423161 C16orf59Q7L2K0 433 aa21.64■■□□□ 1.05
SREBF1-206ENST00000423161 DNERQ8NFT8 737 aa21.64■■□□□ 1.05
SREBF1-206ENST00000423161 MYLIPQ8WY64 445 aa21.64■■□□□ 1.05
SREBF1-206ENST00000423161 ZSCAN10Q96SZ4 725 aaPredicted RBP21.64■■□□□ 1.05
SREBF1-206ENST00000423161 HIPK3Q9H422 1215 aa21.64■■□□□ 1.05
SREBF1-206ENST00000423161 CTNNA3Q9UI47 895 aa21.64■■□□□ 1.05
SREBF1-206ENST00000423161 MYO9BQ13459 2157 aa21.64■■□□□ 1.05
SREBF1-206ENST00000423161 TNKSO95271 1327 aa21.63■■□□□ 1.05
SREBF1-206ENST00000423161 RBM47A0AV96 593 aaKnown RBP21.63■■□□□ 1.05
SREBF1-206ENST00000423161 ACRP10323 421 aa21.63■■□□□ 1.05
SREBF1-206ENST00000423161 DNAJB2P25686 324 aa21.63■■□□□ 1.05
SREBF1-206ENST00000423161 CDC37Q16543 378 aaPredicted RBP21.63■■□□□ 1.05
SREBF1-206ENST00000423161 PSRC1Q6PGN9 363 aaPredicted RBP21.63■■□□□ 1.05
SREBF1-206ENST00000423161 ENAHQ8N8S7 591 aaPredicted RBP21.63■■□□□ 1.05
SREBF1-206ENST00000423161 ANKS1AQ92625 1134 aa21.63■■□□□ 1.05
SREBF1-206ENST00000423161 POLR3EQ9NVU0 708 aa21.63■■□□□ 1.05
SREBF1-206ENST00000423161 ZSWIM5Q9P217 1185 aa21.63■■□□□ 1.05
SREBF1-206ENST00000423161 UNC80Q8N2C7 3258 aa21.63■■□□□ 1.05
SREBF1-206ENST00000423161 B4GALT4O60513 344 aa21.62■■□□□ 1.05
SREBF1-206ENST00000423161 EDNRBP24530 442 aa21.62■■□□□ 1.05
SREBF1-206ENST00000423161 CPT1AP50416 773 aa21.62■■□□□ 1.05
SREBF1-206ENST00000423161 PPP2R5BQ15173 497 aa21.62■■□□□ 1.05
SREBF1-206ENST00000423161 ASPRV1Q53RT3 343 aa21.62■■□□□ 1.05
SREBF1-206ENST00000423161 OR6J1Q8NGC5 347 aa21.62■■□□□ 1.05
SREBF1-206ENST00000423161 KRT23Q9C075 422 aa21.62■■□□□ 1.05
SREBF1-206ENST00000423161 TRPV6Q9H1D0 765 aa21.62■■□□□ 1.05
SREBF1-206ENST00000423161 CNNM2Q9H8M5 875 aa21.62■■□□□ 1.05
SREBF1-206ENST00000423161 UMODL1Q5DID0 1318 aa21.61■■□□□ 1.05
SREBF1-206ENST00000423161 B4DLN1 442 aa21.61■■□□□ 1.05
SREBF1-206ENST00000423161 MRPL12P52815 198 aaKnown RBP21.61■■□□□ 1.05
SREBF1-206ENST00000423161 ZNF365Q70YC5 407 aa21.61■■□□□ 1.05
SREBF1-206ENST00000423161 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.61■■□□□ 1.05
SREBF1-206ENST00000423161 ADGRF4Q8IZF3 695 aa21.61■■□□□ 1.05
SREBF1-206ENST00000423161 RGS22Q8NE09 1264 aa21.61■■□□□ 1.05
SREBF1-206ENST00000423161 MAFAQ8NHW3 353 aaPredicted RBP21.61■■□□□ 1.05
SREBF1-206ENST00000423161 SCFD2Q8WU76 684 aa21.61■■□□□ 1.05
SREBF1-206ENST00000423161 UBAC1Q9BSL1 405 aa21.61■■□□□ 1.05
SREBF1-206ENST00000423161 IL25Q9H293 177 aa21.61■■□□□ 1.05
SREBF1-206ENST00000423161 IL23AQ9NPF7 189 aa21.61■■□□□ 1.05
SREBF1-206ENST00000423161 SUPT16HQ9Y5B9 1047 aaKnown RBP21.61■■□□□ 1.05
SREBF1-206ENST00000423161 EYSQ5T1H1 3165 aa21.61■■□□□ 1.05
SREBF1-206ENST00000423161 ABCB11O95342 1321 aa21.6■■□□□ 1.05
SREBF1-206ENST00000423161 RAD50Q92878 1312 aa21.6■■□□□ 1.05
SREBF1-206ENST00000423161 NKRFO15226 690 aaKnown RBP eCLIP21.6■■□□□ 1.052e-6■■□□□ 12
SREBF1-206ENST00000423161 DHX16O60231 1041 aaKnown RBP21.6■■□□□ 1.05
SREBF1-206ENST00000423161 MYL3P08590 195 aa21.6■■□□□ 1.05
SREBF1-206ENST00000423161 PDE4AP27815 886 aa21.6■■□□□ 1.05
SREBF1-206ENST00000423161 PURAQ00577 322 aaKnown RBP21.6■■□□□ 1.05
SREBF1-206ENST00000423161 RASIP1Q5U651 963 aa21.6■■□□□ 1.05
SREBF1-206ENST00000423161 NOC4LQ9BVI4 516 aaKnown RBP21.6■■□□□ 1.05
SREBF1-206ENST00000423161 SCN5AQ14524 2016 aa21.6■■□□□ 1.05
SREBF1-206ENST00000423161 PARP1P09874 1014 aaKnown RBP21.59■■□□□ 1.05
SREBF1-206ENST00000423161 GSPT1P15170 499 aaKnown RBP21.59■■□□□ 1.05
SREBF1-206ENST00000423161 FOSL2P15408 326 aa21.59■■□□□ 1.05
SREBF1-206ENST00000423161 CCL23P55773 120 aa21.59■■□□□ 1.05
SREBF1-206ENST00000423161 QRICH1Q2TAL8 776 aa21.59■■□□□ 1.05
SREBF1-206ENST00000423161 BRDTQ58F21 947 aaPredicted RBP21.59■■□□□ 1.05
SREBF1-206ENST00000423161 TTC22Q5TAA0 569 aa21.59■■□□□ 1.05
SREBF1-206ENST00000423161 TIFAQ96CG3 184 aa21.59■■□□□ 1.05
SREBF1-206ENST00000423161 ALDH8A1Q9H2A2 487 aaPredicted RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms