RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 SCLYQ96I15 445 aa12.15□□□□□ -0.46
TNFAIP3-202ENST00000420009 C1QTNF1Q9BXJ1 281 aa12.15□□□□□ -0.46
TNFAIP3-202ENST00000420009 LRRCC1Q9C099 1032 aa12.15□□□□□ -0.46
TNFAIP3-202ENST00000420009 PDGFCQ9NRA1 345 aa12.15□□□□□ -0.46
TNFAIP3-202ENST00000420009 ECHDC1Q9NTX5 307 aa12.15□□□□□ -0.46
TNFAIP3-202ENST00000420009 CYP39A1Q9NYL5 469 aa12.15□□□□□ -0.46
TNFAIP3-202ENST00000420009 COG6Q9Y2V7 657 aa12.15□□□□□ -0.46
TNFAIP3-202ENST00000420009 LCTP09848 1927 aa12.15□□□□□ -0.46
TNFAIP3-202ENST00000420009 ZBBXA8MT70 800 aa12.14□□□□□ -0.47
TNFAIP3-202ENST00000420009 PLA2G6O60733 806 aa12.14□□□□□ -0.47
TNFAIP3-202ENST00000420009 GNAT2P19087 354 aa12.14□□□□□ -0.47
TNFAIP3-202ENST00000420009 KCNQ1P51787 676 aa12.14□□□□□ -0.47
TNFAIP3-202ENST00000420009 TTLL4Q14679 1199 aa12.14□□□□□ -0.47
TNFAIP3-202ENST00000420009 MICALL1Q8N3F8 863 aa12.14□□□□□ -0.47
TNFAIP3-202ENST00000420009 CHURC1Q8WUH1 139 aa12.14□□□□□ -0.47
TNFAIP3-202ENST00000420009 STAG1Q8WVM7 1258 aa12.14□□□□□ -0.47
TNFAIP3-202ENST00000420009 TRERF1Q96PN7 1200 aa12.14□□□□□ -0.47
TNFAIP3-202ENST00000420009 VTA1Q9NP79 307 aa12.14□□□□□ -0.47
TNFAIP3-202ENST00000420009 MTCH2Q9Y6C9 303 aa12.14□□□□□ -0.47
TNFAIP3-202ENST00000420009 M0R2C6 588 aa12.13□□□□□ -0.47
TNFAIP3-202ENST00000420009 RNF113AO15541 343 aaKnown RBP12.13□□□□□ -0.47
TNFAIP3-202ENST00000420009 SMARCA5O60264 1052 aaPredicted RBP12.13□□□□□ -0.47
TNFAIP3-202ENST00000420009 CA3P07451 260 aa12.13□□□□□ -0.47
TNFAIP3-202ENST00000420009 ZFYP08048 801 aaPredicted RBP12.13□□□□□ -0.47
TNFAIP3-202ENST00000420009 ALAS1P13196 640 aa12.13□□□□□ -0.47
TNFAIP3-202ENST00000420009 SLC1A4P43007 532 aa12.13□□□□□ -0.47
TNFAIP3-202ENST00000420009 MUM1L1Q5H9M0 696 aa12.13□□□□□ -0.47
TNFAIP3-202ENST00000420009 TRMT13Q9NUP7 481 aaKnown RBP12.13□□□□□ -0.47
TNFAIP3-202ENST00000420009 TNKSO95271 1327 aa12.12□□□□□ -0.47
TNFAIP3-202ENST00000420009 TANC1Q9C0D5 1861 aa12.12□□□□□ -0.47
TNFAIP3-202ENST00000420009 EPOPA6NHQ4 379 aa12.12□□□□□ -0.47
TNFAIP3-202ENST00000420009 TTLL13PA6NNM8 815 aa12.12□□□□□ -0.47
TNFAIP3-202ENST00000420009 RFXAPO00287 272 aa12.12□□□□□ -0.47
TNFAIP3-202ENST00000420009 ARHGEF15O94989 841 aa12.12□□□□□ -0.47
TNFAIP3-202ENST00000420009 SUPT20HL2P0C7V6 817 aa12.12□□□□□ -0.47
TNFAIP3-202ENST00000420009 TSPY3P0CV98 308 aa12.12□□□□□ -0.47
TNFAIP3-202ENST00000420009 TSPY8P0CW00 308 aa12.12□□□□□ -0.47
TNFAIP3-202ENST00000420009 CYP2C9P11712 490 aa12.12□□□□□ -0.47
TNFAIP3-202ENST00000420009 PURAQ00577 322 aaKnown RBP12.12□□□□□ -0.47
TNFAIP3-202ENST00000420009 IKQ13123 557 aaPredicted RBP12.12□□□□□ -0.47
TNFAIP3-202ENST00000420009 DUSP28Q4G0W2 176 aa12.12□□□□□ -0.47
TNFAIP3-202ENST00000420009 TMEM67Q5HYA8 995 aa12.12□□□□□ -0.47
TNFAIP3-202ENST00000420009 EEPD1Q7L9B9 569 aa12.12□□□□□ -0.47
TNFAIP3-202ENST00000420009 IFNL3Q8IZI9 196 aa12.12□□□□□ -0.47
TNFAIP3-202ENST00000420009 SLC9A7Q96T83 725 aa12.12□□□□□ -0.47
TNFAIP3-202ENST00000420009 PRR12Q9ULL5 1215 aa12.12□□□□□ -0.47
TNFAIP3-202ENST00000420009 ISY1Q9ULR0 285 aaKnown RBP12.12□□□□□ -0.47
TNFAIP3-202ENST00000420009 ARIH1Q9Y4X5 557 aaPredicted RBP12.12□□□□□ -0.47
TNFAIP3-202ENST00000420009 PRRC2BQ5JSZ5 2229 aaKnown RBP12.12□□□□□ -0.47
TNFAIP3-202ENST00000420009 TCF20Q9UGU0 1960 aaKnown RBP12.12□□□□□ -0.47
TNFAIP3-202ENST00000420009 PATL2C9JE40 543 aaKnown RBP12.11□□□□□ -0.47
TNFAIP3-202ENST00000420009 GTPBP6O43824 516 aaPredicted RBP12.11□□□□□ -0.47
TNFAIP3-202ENST00000420009 MCCP23508 829 aa12.11□□□□□ -0.47
TNFAIP3-202ENST00000420009 RFC2P35250 354 aa12.11□□□□□ -0.47
TNFAIP3-202ENST00000420009 SNAP25P60880 206 aa12.11□□□□□ -0.47
TNFAIP3-202ENST00000420009 TFAP4Q01664 338 aa12.11□□□□□ -0.47
TNFAIP3-202ENST00000420009 PDE4BQ07343 736 aa12.11□□□□□ -0.47
TNFAIP3-202ENST00000420009 SKIV2LQ15477 1246 aaKnown RBP12.11□□□□□ -0.47
TNFAIP3-202ENST00000420009 KIAA1211Q6ZU35 1233 aa12.11□□□□□ -0.47
TNFAIP3-202ENST00000420009 KCTD1Q719H9 257 aa12.11□□□□□ -0.47
TNFAIP3-202ENST00000420009 RASGRP2Q7LDG7 609 aa12.11□□□□□ -0.47
TNFAIP3-202ENST00000420009 PURBQ96QR8 312 aaKnown RBP12.11□□□□□ -0.47
TNFAIP3-202ENST00000420009 POLR3EQ9NVU0 708 aa12.11□□□□□ -0.47
TNFAIP3-202ENST00000420009 COG5Q9UP83 839 aa12.11□□□□□ -0.47
TNFAIP3-202ENST00000420009 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.11□□□□□ -0.47
TNFAIP3-202ENST00000420009 SCN10AQ9Y5Y9 1956 aa12.1□□□□□ -0.47
TNFAIP3-202ENST00000420009 LOC102724159A0A0B4J2E5 919 aa12.1□□□□□ -0.47
TNFAIP3-202ENST00000420009 RBM47A0AV96 593 aaKnown RBP12.1□□□□□ -0.47
TNFAIP3-202ENST00000420009 APPP05067 770 aa12.1□□□□□ -0.47
TNFAIP3-202ENST00000420009 ICAM1P05362 532 aa12.1□□□□□ -0.47
TNFAIP3-202ENST00000420009 ACTN1P12814 892 aa12.1□□□□□ -0.47
TNFAIP3-202ENST00000420009 NOVP48745 357 aa12.1□□□□□ -0.47
TNFAIP3-202ENST00000420009 CPT1AP50416 773 aa12.1□□□□□ -0.47
TNFAIP3-202ENST00000420009 ALDH5A1P51649 535 aaPredicted RBP12.1□□□□□ -0.47
TNFAIP3-202ENST00000420009 TAP1Q03518 808 aa12.1□□□□□ -0.47
TNFAIP3-202ENST00000420009 PWP2Q15269 919 aaKnown RBP12.1□□□□□ -0.47
TNFAIP3-202ENST00000420009 PPP4R3BQ5MIZ7 849 aa12.1□□□□□ -0.47
TNFAIP3-202ENST00000420009 TSHZ3Q63HK5 1081 aa12.1□□□□□ -0.47
TNFAIP3-202ENST00000420009 KRT40Q6A162 431 aa12.1□□□□□ -0.47
TNFAIP3-202ENST00000420009 RCSD1Q6JBY9 416 aa12.1□□□□□ -0.47
TNFAIP3-202ENST00000420009 NSMFQ6X4W1 530 aa12.1□□□□□ -0.47
TNFAIP3-202ENST00000420009 DEFB128Q7Z7B8 93 aa12.1□□□□□ -0.47
TNFAIP3-202ENST00000420009 PHOSPHO2Q8TCD6 241 aa12.1□□□□□ -0.47
TNFAIP3-202ENST00000420009 MTG1Q9BT17 334 aaPredicted RBP12.1□□□□□ -0.47
TNFAIP3-202ENST00000420009 LRFN3Q9BTN0 628 aa12.1□□□□□ -0.47
TNFAIP3-202ENST00000420009 WDR11Q9BZH6 1224 aa12.1□□□□□ -0.47
TNFAIP3-202ENST00000420009 NACAP1Q9BZK3 213 aa12.1□□□□□ -0.47
TNFAIP3-202ENST00000420009 CHMP4BQ9H444 224 aaKnown RBP12.1□□□□□ -0.47
TNFAIP3-202ENST00000420009 CERS4Q9HA82 394 aa12.1□□□□□ -0.47
TNFAIP3-202ENST00000420009 CCPG1Q9ULG6 757 aa12.1□□□□□ -0.47
TNFAIP3-202ENST00000420009 COL4A4P53420 1690 aaPredicted RBP12.1□□□□□ -0.47
TNFAIP3-202ENST00000420009 SCN5AQ14524 2016 aa12.1□□□□□ -0.47
TNFAIP3-202ENST00000420009 TLL1O43897 1013 aa12.09□□□□□ -0.47
TNFAIP3-202ENST00000420009 SLC3A2P08195 630 aaKnown RBP12.09□□□□□ -0.47
TNFAIP3-202ENST00000420009 PPARAQ07869 468 aa12.09□□□□□ -0.47
TNFAIP3-202ENST00000420009 HERC6Q8IVU3 1022 aa12.09□□□□□ -0.47
TNFAIP3-202ENST00000420009 CHMP4CQ96CF2 233 aa12.09□□□□□ -0.47
TNFAIP3-202ENST00000420009 GPATCH3Q96I76 525 aa12.09□□□□□ -0.47
TNFAIP3-202ENST00000420009 NAPBQ9H115 298 aa12.09□□□□□ -0.47
TNFAIP3-202ENST00000420009 RANBP17Q9H2T7 1088 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms