RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 TSKSQ9UJT2 592 aa16.28■□□□□ 0.2
SHMT1P1-201ENST00000419974 A0A1W2PQ27 194 aa16.27■□□□□ 0.2
SHMT1P1-201ENST00000419974 A0A1W2PQ64 194 aa16.27■□□□□ 0.2
SHMT1P1-201ENST00000419974 A0A1W2PQD8 194 aa16.27■□□□□ 0.2
SHMT1P1-201ENST00000419974 ADAMTS3O15072 1205 aa16.27■□□□□ 0.2
SHMT1P1-201ENST00000419974 PRPF40AO75400 957 aaKnown RBP16.27■□□□□ 0.2
SHMT1P1-201ENST00000419974 MBD3O95983 291 aa16.27■□□□□ 0.2
SHMT1P1-201ENST00000419974 COPB2P35606 906 aa16.27■□□□□ 0.2
SHMT1P1-201ENST00000419974 INHBEP58166 350 aa16.27■□□□□ 0.2
SHMT1P1-201ENST00000419974 SF3A1Q15459 793 aaKnown RBP16.27■□□□□ 0.2
SHMT1P1-201ENST00000419974 KLHL40Q2TBA0 621 aa16.27■□□□□ 0.2
SHMT1P1-201ENST00000419974 ARL6IP4Q66PJ3 421 aaKnown RBP16.27■□□□□ 0.2
SHMT1P1-201ENST00000419974 ADALQ6DHV7 355 aa16.27■□□□□ 0.2
SHMT1P1-201ENST00000419974 ANKRD23Q86SG2 305 aa16.27■□□□□ 0.2
SHMT1P1-201ENST00000419974 CHAMP1Q96JM3 812 aa16.27■□□□□ 0.2
SHMT1P1-201ENST00000419974 TEX13BQ9BXU2 312 aa16.27■□□□□ 0.2
SHMT1P1-201ENST00000419974 PNMA3Q9UL41 463 aa16.27■□□□□ 0.2
SHMT1P1-201ENST00000419974 CCPG1Q9ULG6 757 aa16.27■□□□□ 0.2
SHMT1P1-201ENST00000419974 RABGAP1Q9Y3P9 1069 aa16.27■□□□□ 0.2
SHMT1P1-201ENST00000419974 CLIC4Q9Y696 253 aa16.27■□□□□ 0.2
SHMT1P1-201ENST00000419974 MYH15Q9Y2K3 1946 aa16.27■□□□□ 0.2
SHMT1P1-201ENST00000419974 A0A0G2JMZ2 1700 aa16.27■□□□□ 0.19
SHMT1P1-201ENST00000419974 CYP3A7-CYP3A51PA0A087WV96 503 aa16.26■□□□□ 0.19
SHMT1P1-201ENST00000419974 SPTLC2O15270 562 aa16.26■□□□□ 0.19
SHMT1P1-201ENST00000419974 FIBPO43427 364 aa16.26■□□□□ 0.19
SHMT1P1-201ENST00000419974 TRPA1O75762 1119 aa16.26■□□□□ 0.19
SHMT1P1-201ENST00000419974 CYP3A4P08684 503 aa16.26■□□□□ 0.19
SHMT1P1-201ENST00000419974 GCFC2P16383 781 aaKnown RBP16.26■□□□□ 0.19
SHMT1P1-201ENST00000419974 NCLP19338 710 aaKnown RBP16.26■□□□□ 0.19
SHMT1P1-201ENST00000419974 OSBPP22059 807 aa16.26■□□□□ 0.19
SHMT1P1-201ENST00000419974 CYP3A7P24462 503 aa16.26■□□□□ 0.19
SHMT1P1-201ENST00000419974 TMEM132BQ14DG7 1078 aa16.26■□□□□ 0.19
SHMT1P1-201ENST00000419974 TTC38Q5R3I4 469 aa16.26■□□□□ 0.19
SHMT1P1-201ENST00000419974 NEK8Q86SG6 692 aa16.26■□□□□ 0.19
SHMT1P1-201ENST00000419974 ZNF579Q8NAF0 562 aaKnown RBP16.26■□□□□ 0.19
SHMT1P1-201ENST00000419974 ASCC2Q9H1I8 757 aaPredicted RBP16.26■□□□□ 0.19
SHMT1P1-201ENST00000419974 FAM237AA0A1B0GTK4 181 aa16.25■□□□□ 0.19
SHMT1P1-201ENST00000419974 GCOM1H8Y6P7 765 aaPredicted RBP16.25■□□□□ 0.19
SHMT1P1-201ENST00000419974 POLR2MP0CAP2 368 aa16.25■□□□□ 0.19
SHMT1P1-201ENST00000419974 PTPREP23469 700 aa16.25■□□□□ 0.19
SHMT1P1-201ENST00000419974 CIITAP33076 1130 aa16.25■□□□□ 0.19
SHMT1P1-201ENST00000419974 PRPHP41219 470 aa16.25■□□□□ 0.19
SHMT1P1-201ENST00000419974 SNAP25P60880 206 aa16.25■□□□□ 0.19
SHMT1P1-201ENST00000419974 ATP2C1P98194 919 aaPredicted RBP16.25■□□□□ 0.19
SHMT1P1-201ENST00000419974 SREBF2Q12772 1141 aa16.25■□□□□ 0.19
SHMT1P1-201ENST00000419974 STK38Q15208 465 aa16.25■□□□□ 0.19
SHMT1P1-201ENST00000419974 FOXD4L6Q3SYB3 417 aaPredicted RBP16.25■□□□□ 0.19
SHMT1P1-201ENST00000419974 USH1GQ495M9 461 aa16.25■□□□□ 0.19
SHMT1P1-201ENST00000419974 CCDC174Q6PII3 467 aa16.25■□□□□ 0.19
SHMT1P1-201ENST00000419974 FOXD4L3Q6VB84 417 aaPredicted RBP16.25■□□□□ 0.19
SHMT1P1-201ENST00000419974 CHST13Q8NET6 341 aa16.25■□□□□ 0.19
SHMT1P1-201ENST00000419974 FERMT2Q96AC1 680 aa16.25■□□□□ 0.19
SHMT1P1-201ENST00000419974 AGBL1Q96MI9 1066 aa16.25■□□□□ 0.19
SHMT1P1-201ENST00000419974 MBOAT7Q96N66 472 aa16.25■□□□□ 0.19
SHMT1P1-201ENST00000419974 CFHR5Q9BXR6 569 aa16.25■□□□□ 0.19
SHMT1P1-201ENST00000419974 BIN2Q9UBW5 565 aaPredicted RBP16.25■□□□□ 0.19
SHMT1P1-201ENST00000419974 CTDP1Q9Y5B0 961 aaPredicted RBP16.25■□□□□ 0.19
SHMT1P1-201ENST00000419974 PCDHB6Q9Y5E3 794 aa16.25■□□□□ 0.19
SHMT1P1-201ENST00000419974 FRMPD4Q14CM0 1322 aa16.25■□□□□ 0.19
SHMT1P1-201ENST00000419974 SREBF1P36956 1147 aa16.24■□□□□ 0.19
SHMT1P1-201ENST00000419974 STAT3P40763 770 aa16.24■□□□□ 0.19
SHMT1P1-201ENST00000419974 HERVK_113P62684 666 aa16.24■□□□□ 0.19
SHMT1P1-201ENST00000419974 IRX3P78415 501 aaPredicted RBP16.24■□□□□ 0.19
SHMT1P1-201ENST00000419974 NOM1Q5C9Z4 860 aaKnown RBP16.24■□□□□ 0.19
SHMT1P1-201ENST00000419974 AXDND1Q5T1B0 1012 aaPredicted RBP16.24■□□□□ 0.19
SHMT1P1-201ENST00000419974 POTEEQ6S8J3 1075 aa16.24■□□□□ 0.19
SHMT1P1-201ENST00000419974 GADL1Q6ZQY3 521 aa16.24■□□□□ 0.19
SHMT1P1-201ENST00000419974 RIOX2Q8IUF8 465 aa16.24■□□□□ 0.19
SHMT1P1-201ENST00000419974 C4orf32Q8N8J7 132 aa16.24■□□□□ 0.19
SHMT1P1-201ENST00000419974 RASGRP4Q8TDF6 673 aa16.24■□□□□ 0.19
SHMT1P1-201ENST00000419974 TBCKQ8TEA7 893 aa16.24■□□□□ 0.19
SHMT1P1-201ENST00000419974 PGBD1Q96JS3 809 aa16.24■□□□□ 0.19
SHMT1P1-201ENST00000419974 P2RX7Q99572 595 aaKnown RBP16.24■□□□□ 0.19
SHMT1P1-201ENST00000419974 FTOQ9C0B1 505 aaKnown RBP eCLIP16.24■□□□□ 0.19
SHMT1P1-201ENST00000419974 GDPD2Q9HCC8 539 aa16.24■□□□□ 0.19
SHMT1P1-201ENST00000419974 RAVER2Q9HCJ3 691 aaKnown RBP16.24■□□□□ 0.19
SHMT1P1-201ENST00000419974 FBXO40Q9UH90 709 aa16.24■□□□□ 0.19
SHMT1P1-201ENST00000419974 SRPRBQ9Y5M8 271 aaKnown RBP16.24■□□□□ 0.19
SHMT1P1-201ENST00000419974 CASP8AP2Q9UKL3 1982 aa16.24■□□□□ 0.19
SHMT1P1-201ENST00000419974 FAM205CA6NFA0 338 aa16.23■□□□□ 0.19
SHMT1P1-201ENST00000419974 MANSC4A6NHS7 340 aaPredicted RBP16.23■□□□□ 0.19
SHMT1P1-201ENST00000419974 EDIL3O43854 480 aa16.23■□□□□ 0.19
SHMT1P1-201ENST00000419974 TRAK2O60296 914 aa16.23■□□□□ 0.19
SHMT1P1-201ENST00000419974 SLC25A27O95847 323 aa16.23■□□□□ 0.19
SHMT1P1-201ENST00000419974 CMA1P23946 247 aa16.23■□□□□ 0.19
SHMT1P1-201ENST00000419974 USP17L6PQ6QN14 398 aa16.23■□□□□ 0.19
SHMT1P1-201ENST00000419974 BRI3BPQ8WY22 251 aa16.23■□□□□ 0.19
SHMT1P1-201ENST00000419974 ABHD8Q96I13 439 aa16.23■□□□□ 0.19
SHMT1P1-201ENST00000419974 ANP32EQ9BTT0 268 aa16.23■□□□□ 0.19
SHMT1P1-201ENST00000419974 EHMT1Q9H9B1 1298 aa16.23■□□□□ 0.19
SHMT1P1-201ENST00000419974 PCDHA7Q9UN72 937 aa16.23■□□□□ 0.19
SHMT1P1-201ENST00000419974 SPDYE3A6NKU9 549 aa16.22■□□□□ 0.19
SHMT1P1-201ENST00000419974 CUTAO60888 179 aa16.22■□□□□ 0.19
SHMT1P1-201ENST00000419974 CAPN15O75808 1086 aa16.22■□□□□ 0.19
SHMT1P1-201ENST00000419974 GCLCP48506 637 aaPredicted RBP16.22■□□□□ 0.19
SHMT1P1-201ENST00000419974 INF2Q27J81 1249 aa16.22■□□□□ 0.19
SHMT1P1-201ENST00000419974 JAKMIP3Q5VZ66 844 aa16.22■□□□□ 0.19
SHMT1P1-201ENST00000419974 KRI1Q8N9T8 703 aaKnown RBP16.22■□□□□ 0.19
SHMT1P1-201ENST00000419974 SHCBP1Q8NEM2 672 aa16.22■□□□□ 0.19
SHMT1P1-201ENST00000419974 TRERF1Q96PN7 1200 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms