RNA–Protein interactions for RNA: ENST00000417478.6

RUFY3-203, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 2,143 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-203ENST00000417478 ATG4CQ96DT6 458 aa22.81■■□□□ 1.24
RUFY3-203ENST00000417478 KCNH4Q9UQ05 1017 aa22.81■■□□□ 1.24
RUFY3-203ENST00000417478 FKBP1BP68106 108 aa22.81■■□□□ 1.24
RUFY3-203ENST00000417478 JAKMIP3Q5VZ66 844 aa22.81■■□□□ 1.24
RUFY3-203ENST00000417478 CATSPERGQ6ZRH7 1159 aa22.81■■□□□ 1.24
RUFY3-203ENST00000417478 AGBL1Q96MI9 1066 aa22.81■■□□□ 1.24
RUFY3-203ENST00000417478 PSTPIP2Q9H939 334 aa22.81■■□□□ 1.24
RUFY3-203ENST00000417478 RIC8AQ9NPQ8 531 aa22.81■■□□□ 1.24
RUFY3-203ENST00000417478 CCDC39Q9UFE4 941 aa22.81■■□□□ 1.24
RUFY3-203ENST00000417478 KCNH3Q9ULD8 1083 aa22.81■■□□□ 1.24
RUFY3-203ENST00000417478 ZNF536O15090 1300 aa22.81■■□□□ 1.24
RUFY3-203ENST00000417478 CXCL11O14625 94 aa22.8■■□□□ 1.24
RUFY3-203ENST00000417478 TTC38Q5R3I4 469 aa22.8■■□□□ 1.24
RUFY3-203ENST00000417478 REXO1Q8N1G1 1221 aaKnown RBP22.8■■□□□ 1.24
RUFY3-203ENST00000417478 SLC38A10Q9HBR0 1119 aa22.8■■□□□ 1.24
RUFY3-203ENST00000417478 OPLAHO14841 1288 aa22.79■■□□□ 1.24
RUFY3-203ENST00000417478 CPXCR1Q8N123 301 aa22.79■■□□□ 1.24
RUFY3-203ENST00000417478 USP17L15C9J2P7 530 aa22.79■■□□□ 1.24
RUFY3-203ENST00000417478 USP17L13C9JLJ4 530 aa22.79■■□□□ 1.24
RUFY3-203ENST00000417478 USP17L11C9JVI0 530 aa22.79■■□□□ 1.24
RUFY3-203ENST00000417478 USP17L18D6R9N7 530 aa22.79■■□□□ 1.24
RUFY3-203ENST00000417478 USP17L22D6RA61 530 aa22.79■■□□□ 1.24
RUFY3-203ENST00000417478 USP17L17D6RBQ6 530 aa22.79■■□□□ 1.24
RUFY3-203ENST00000417478 USP17L19D6RCP7 530 aa22.79■■□□□ 1.24
RUFY3-203ENST00000417478 USP17L20D6RJB6 530 aa22.79■■□□□ 1.24
RUFY3-203ENST00000417478 USP17L24Q0WX57 530 aa22.79■■□□□ 1.24
RUFY3-203ENST00000417478 MKRN3Q13064 507 aaKnown RBP22.79■■□□□ 1.24
RUFY3-203ENST00000417478 ZRSR1Q15695 479 aaKnown RBP22.79■■□□□ 1.24
RUFY3-203ENST00000417478 USP17L6PQ6QN14 398 aa22.79■■□□□ 1.24
RUFY3-203ENST00000417478 ELOA2Q8IYF1 753 aaPredicted RBP22.79■■□□□ 1.24
RUFY3-203ENST00000417478 CUL5Q93034 780 aa22.79■■□□□ 1.24
RUFY3-203ENST00000417478 CCDC194A0A1B0GVG4 234 aa22.78■■□□□ 1.24
RUFY3-203ENST00000417478 VWA5AO00534 786 aa22.78■■□□□ 1.24
RUFY3-203ENST00000417478 KIF3CO14782 793 aa22.78■■□□□ 1.24
RUFY3-203ENST00000417478 MOGSQ13724 837 aa22.78■■□□□ 1.24
RUFY3-203ENST00000417478 COG2Q14746 738 aa22.78■■□□□ 1.24
RUFY3-203ENST00000417478 FERMT2Q96AC1 680 aa22.78■■□□□ 1.24
RUFY3-203ENST00000417478 RAVER2Q9HCJ3 691 aaKnown RBP22.78■■□□□ 1.24
RUFY3-203ENST00000417478 MYH7BA7E2Y1 1941 aa22.78■■□□□ 1.24
RUFY3-203ENST00000417478 DSG3P32926 999 aa22.78■■□□□ 1.24
RUFY3-203ENST00000417478 C11orf57Q6ZUT1 292 aaPredicted RBP22.78■■□□□ 1.24
RUFY3-203ENST00000417478 CEP57L1Q8IYX8 460 aa22.78■■□□□ 1.24
RUFY3-203ENST00000417478 NAT10Q9H0A0 1025 aaKnown RBP22.78■■□□□ 1.24
RUFY3-203ENST00000417478 ICAM1P05362 532 aa22.77■■□□□ 1.24
RUFY3-203ENST00000417478 MRPL12P52815 198 aaKnown RBP22.77■■□□□ 1.24
RUFY3-203ENST00000417478 INF2Q27J81 1249 aa22.77■■□□□ 1.24
RUFY3-203ENST00000417478 KRBA2Q6ZNG9 492 aa22.77■■□□□ 1.24
RUFY3-203ENST00000417478 ZSCAN30Q86W11 494 aa22.77■■□□□ 1.24
RUFY3-203ENST00000417478 RRAGDQ9NQL2 400 aaPredicted RBP22.77■■□□□ 1.24
RUFY3-203ENST00000417478 CCPG1Q9ULG6 757 aa22.77■■□□□ 1.24
RUFY3-203ENST00000417478 UNCXA6NJT0 531 aa22.76■■□□□ 1.23
RUFY3-203ENST00000417478 CLK2P49760 499 aaKnown RBP22.76■■□□□ 1.23
RUFY3-203ENST00000417478 GRIN1Q05586 938 aa22.76■■□□□ 1.23
RUFY3-203ENST00000417478 IQCB1Q15051 598 aa22.76■■□□□ 1.23
RUFY3-203ENST00000417478 PROCA1Q8NCQ7 364 aaPredicted RBP22.76■■□□□ 1.23
RUFY3-203ENST00000417478 MEIS2O14770 477 aa22.76■■□□□ 1.23
RUFY3-203ENST00000417478 PLCB2Q00722 1185 aa22.76■■□□□ 1.23
RUFY3-203ENST00000417478 TBC1D5Q92609 795 aa22.76■■□□□ 1.23
RUFY3-203ENST00000417478 ERCC4Q92889 916 aaPredicted RBP22.76■■□□□ 1.23
RUFY3-203ENST00000417478 P2RX7Q99572 595 aaKnown RBP22.76■■□□□ 1.23
RUFY3-203ENST00000417478 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.75■■□□□ 1.23
RUFY3-203ENST00000417478 SPDYE16A6NNV3 312 aaPredicted RBP22.75■■□□□ 1.23
RUFY3-203ENST00000417478 AP5Z1O43299 807 aa22.75■■□□□ 1.23
RUFY3-203ENST00000417478 ZBED4O75132 1171 aa22.75■■□□□ 1.23
RUFY3-203ENST00000417478 ATP2C1P98194 919 aaPredicted RBP22.75■■□□□ 1.23
RUFY3-203ENST00000417478 KRT25Q7Z3Z0 450 aa22.75■■□□□ 1.23
RUFY3-203ENST00000417478 CNNM3Q8NE01 707 aa22.75■■□□□ 1.23
RUFY3-203ENST00000417478 CSRNP2Q9H175 543 aa22.75■■□□□ 1.23
RUFY3-203ENST00000417478 HOOK1Q9UJC3 728 aaKnown RBP22.75■■□□□ 1.23
RUFY3-203ENST00000417478 TUBE1Q9UJT0 475 aa22.75■■□□□ 1.23
RUFY3-203ENST00000417478 ADAMTS5Q9UNA0 930 aa22.75■■□□□ 1.23
RUFY3-203ENST00000417478 GOLGA6L19H0YKK7 550 aa22.75■■□□□ 1.23
RUFY3-203ENST00000417478 PTMAP06454 111 aaKnown RBP22.75■■□□□ 1.23
RUFY3-203ENST00000417478 HOXA13P31271 388 aaPredicted RBP22.75■■□□□ 1.23
RUFY3-203ENST00000417478 HUNKP57058 714 aa22.75■■□□□ 1.23
RUFY3-203ENST00000417478 ZNF174Q15697 407 aa22.75■■□□□ 1.23
RUFY3-203ENST00000417478 LONRF3Q496Y0 759 aa22.75■■□□□ 1.23
RUFY3-203ENST00000417478 POTEEQ6S8J3 1075 aa22.75■■□□□ 1.23
RUFY3-203ENST00000417478 REPS2Q8NFH8 660 aa22.75■■□□□ 1.23
RUFY3-203ENST00000417478 RTN4Q9NQC3 1192 aaKnown RBP22.75■■□□□ 1.23
RUFY3-203ENST00000417478 PASKQ96RG2 1323 aa22.74■■□□□ 1.23
RUFY3-203ENST00000417478 PEX10O60683 326 aa22.74■■□□□ 1.23
RUFY3-203ENST00000417478 NLRP12P59046 1061 aa22.74■■□□□ 1.23
RUFY3-203ENST00000417478 SNAPC2Q13487 334 aa22.74■■□□□ 1.23
RUFY3-203ENST00000417478 NONOQ15233 471 aaKnown RBP eCLIP22.74■■□□□ 1.23
RUFY3-203ENST00000417478 SPECC1Q5M775 1068 aa22.74■■□□□ 1.23
RUFY3-203ENST00000417478 HOMER2Q9NSB8 354 aa22.74■■□□□ 1.23
RUFY3-203ENST00000417478 CTDP1Q9Y5B0 961 aaPredicted RBP22.74■■□□□ 1.23
RUFY3-203ENST00000417478 TBCKQ8TEA7 893 aa22.73■■□□□ 1.23
RUFY3-203ENST00000417478 BPIFA3Q9BQP9 254 aa22.73■■□□□ 1.23
RUFY3-203ENST00000417478 HOXC10Q9NYD6 342 aa22.73■■□□□ 1.23
RUFY3-203ENST00000417478 AGTPBP1Q9UPW5 1226 aa22.73■■□□□ 1.23
RUFY3-203ENST00000417478 ABCB11O95342 1321 aa22.73■■□□□ 1.23
RUFY3-203ENST00000417478 ALAS1P13196 640 aa22.73■■□□□ 1.23
RUFY3-203ENST00000417478 HOXA7P31268 230 aaPredicted RBP22.73■■□□□ 1.23
RUFY3-203ENST00000417478 TMEM132BQ14DG7 1078 aa22.73■■□□□ 1.23
RUFY3-203ENST00000417478 GPAT2Q6NUI2 795 aa22.73■■□□□ 1.23
RUFY3-203ENST00000417478 BECN2A8MW95 431 aa22.72■■□□□ 1.23
RUFY3-203ENST00000417478 TRAF1Q13077 416 aa22.72■■□□□ 1.23
RUFY3-203ENST00000417478 PTGDRQ13258 359 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms