RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 TAP1Q03518 808 aa21.26■□□□□ 0.99
VCP-202ENST00000417448 CTR9Q6PD62 1173 aa21.26■□□□□ 0.99
VCP-202ENST00000417448 CWC27Q6UX04 472 aaKnown RBP21.26■□□□□ 0.99
VCP-202ENST00000417448 DEFB128Q7Z7B8 93 aa21.26■□□□□ 0.99
VCP-202ENST00000417448 ZNF589Q86UQ0 364 aaPredicted RBP21.26■□□□□ 0.99
VCP-202ENST00000417448 CHST13Q8NET6 341 aa21.26■□□□□ 0.99
VCP-202ENST00000417448 KIFC2Q96AC6 838 aa21.26■□□□□ 0.99
VCP-202ENST00000417448 SOWAHBA6NEL2 793 aa21.25■□□□□ 0.99
VCP-202ENST00000417448 PI4K2BG5E9Z4 385 aa21.25■□□□□ 0.99
VCP-202ENST00000417448 ALDH8A1Q9H2A2 487 aaPredicted RBP21.25■□□□□ 0.99
VCP-202ENST00000417448 HOMER2Q9NSB8 354 aa21.25■□□□□ 0.99
VCP-202ENST00000417448 TRMT13Q9NUP7 481 aaKnown RBP21.25■□□□□ 0.99
VCP-202ENST00000417448 FBXO40Q9UH90 709 aa21.25■□□□□ 0.99
VCP-202ENST00000417448 MINDY4BA8MYZ0 360 aa21.24■□□□□ 0.99
VCP-202ENST00000417448 FOXP2O15409 715 aa21.24■□□□□ 0.99
VCP-202ENST00000417448 DYNC1LI2O43237 492 aaPredicted RBP21.24■□□□□ 0.99
VCP-202ENST00000417448 CYP2C9P11712 490 aa21.24■□□□□ 0.99
VCP-202ENST00000417448 RASA1P20936 1047 aa21.24■□□□□ 0.99
VCP-202ENST00000417448 GRB10Q13322 594 aa21.24■□□□□ 0.99
VCP-202ENST00000417448 ERICH6BQ5W0A0 696 aa21.24■□□□□ 0.99
VCP-202ENST00000417448 AMOTL1Q8IY63 956 aa21.24■□□□□ 0.99
VCP-202ENST00000417448 PDGFCQ9NRA1 345 aa21.24■□□□□ 0.99
VCP-202ENST00000417448 HELLSQ9NRZ9 838 aa21.24■□□□□ 0.99
VCP-202ENST00000417448 DIAPH3Q9NSV4 1193 aa21.24■□□□□ 0.99
VCP-202ENST00000417448 NYAP2Q9P242 653 aa21.24■□□□□ 0.99
VCP-202ENST00000417448 PATL2C9JE40 543 aaKnown RBP21.23■□□□□ 0.99
VCP-202ENST00000417448 PFKMP08237 780 aa21.23■□□□□ 0.99
VCP-202ENST00000417448 MCMDC2Q4G0Z9 681 aa21.23■□□□□ 0.99
VCP-202ENST00000417448 IFNL3Q8IZI9 196 aa21.23■□□□□ 0.99
VCP-202ENST00000417448 SEZ6LQ9BYH1 1024 aa21.23■□□□□ 0.99
VCP-202ENST00000417448 IL25Q9H293 177 aa21.23■□□□□ 0.99
VCP-202ENST00000417448 TDO2P48775 406 aa21.22■□□□□ 0.99
VCP-202ENST00000417448 OAZ1P54368 228 aa21.22■□□□□ 0.99
VCP-202ENST00000417448 TAPT1Q6NXT6 567 aa21.22■□□□□ 0.99
VCP-202ENST00000417448 SLC9A7Q96T83 725 aa21.22■□□□□ 0.99
VCP-202ENST00000417448 AP5M1Q9H0R1 490 aa21.22■□□□□ 0.99
VCP-202ENST00000417448 A1CFQ9NQ94 594 aaKnown RBP21.22■□□□□ 0.99
VCP-202ENST00000417448 CTDP1Q9Y5B0 961 aaPredicted RBP21.22■□□□□ 0.99
VCP-202ENST00000417448 SCN10AQ9Y5Y9 1956 aa21.21■□□□□ 0.99
VCP-202ENST00000417448 EEPD1Q7L9B9 569 aa21.21■□□□□ 0.99
VCP-202ENST00000417448 HERC6Q8IVU3 1022 aa21.21■□□□□ 0.99
VCP-202ENST00000417448 FBXO16Q8IX29 292 aaPredicted RBP21.21■□□□□ 0.99
VCP-202ENST00000417448 DDRGK1Q96HY6 314 aa21.21■□□□□ 0.99
VCP-202ENST00000417448 TNKSO95271 1327 aa21.21■□□□□ 0.99
VCP-202ENST00000417448 IGKV6D-41A0A0C4DH26 115 aa21.2■□□□□ 0.98
VCP-202ENST00000417448 ZEB2O60315 1214 aa21.2■□□□□ 0.98
VCP-202ENST00000417448 GNAT2P19087 354 aa21.2■□□□□ 0.98
VCP-202ENST00000417448 ACAD9Q9H845 621 aa21.2■□□□□ 0.98
VCP-202ENST00000417448 CLIP2Q9UDT6 1046 aa21.2■□□□□ 0.98
VCP-202ENST00000417448 FEM1BQ9UK73 627 aa21.2■□□□□ 0.98
VCP-202ENST00000417448 ZNF536O15090 1300 aa21.2■□□□□ 0.98
VCP-202ENST00000417448 TRIP12Q14669 1992 aaPredicted RBP21.19■□□□□ 0.98
VCP-202ENST00000417448 ASB14A6NK59 587 aa21.19■□□□□ 0.98
VCP-202ENST00000417448 PRR33A8MZF0 331 aa21.19■□□□□ 0.98
VCP-202ENST00000417448 CHMLP26374 656 aa21.19■□□□□ 0.98
VCP-202ENST00000417448 PHOSPHO2Q8TCD6 241 aa21.19■□□□□ 0.98
VCP-202ENST00000417448 INCENPQ9NQS7 918 aa21.19■□□□□ 0.98
VCP-202ENST00000417448 ARPP21Q9UBL0 812 aaPredicted RBP21.19■□□□□ 0.98
VCP-202ENST00000417448 CCDC171Q6TFL3 1326 aa21.19■□□□□ 0.98
VCP-202ENST00000417448 LCHNA4D1U4 455 aa21.18■□□□□ 0.98
VCP-202ENST00000417448 ACTN1P12814 892 aa21.18■□□□□ 0.98
VCP-202ENST00000417448 MRE11P49959 708 aa21.18■□□□□ 0.98
VCP-202ENST00000417448 LRRC47Q8N1G4 583 aaKnown RBP21.18■□□□□ 0.98
VCP-202ENST00000417448 PPP1R13LQ8WUF5 828 aa21.18■□□□□ 0.98
VCP-202ENST00000417448 NAPBQ9H115 298 aa21.18■□□□□ 0.98
VCP-202ENST00000417448 RNF146Q9NTX7 359 aa21.18■□□□□ 0.98
VCP-202ENST00000417448 Q9Y3F1 56 aa21.18■□□□□ 0.98
VCP-202ENST00000417448 HSPD1P10809 573 aaKnown RBP21.17■□□□□ 0.98
VCP-202ENST00000417448 CTDSPL2Q05D32 466 aa21.17■□□□□ 0.98
VCP-202ENST00000417448 IQSEC1Q6DN90 963 aa21.17■□□□□ 0.98
VCP-202ENST00000417448 GDPD5Q8WTR4 605 aa21.17■□□□□ 0.98
VCP-202ENST00000417448 MKL1Q969V6 931 aa21.17■□□□□ 0.98
VCP-202ENST00000417448 CEP95Q96GE4 821 aa21.17■□□□□ 0.98
VCP-202ENST00000417448 PURBQ96QR8 312 aaKnown RBP21.17■□□□□ 0.98
VCP-202ENST00000417448 SIP14410 1827 aa21.16■□□□□ 0.98
VCP-202ENST00000417448 HIP1O00291 1037 aa21.16■□□□□ 0.98
VCP-202ENST00000417448 PRDM1O75626 825 aa21.16■□□□□ 0.98
VCP-202ENST00000417448 IQCF3P0C7M6 154 aa21.16■□□□□ 0.98
VCP-202ENST00000417448 SUPT20HL2P0C7V6 817 aa21.16■□□□□ 0.98
VCP-202ENST00000417448 PURAQ00577 322 aaKnown RBP21.16■□□□□ 0.98
VCP-202ENST00000417448 SBK1Q52WX2 424 aa21.16■□□□□ 0.98
VCP-202ENST00000417448 GIMAP6Q6P9H5 292 aa21.16■□□□□ 0.98
VCP-202ENST00000417448 NACAP1Q9BZK3 213 aa21.16■□□□□ 0.98
VCP-202ENST00000417448 FGAP02671 866 aa21.15■□□□□ 0.98
VCP-202ENST00000417448 RFC2P35250 354 aa21.15■□□□□ 0.98
VCP-202ENST00000417448 TMCO2Q7Z6W1 182 aaPredicted RBP21.15■□□□□ 0.98
VCP-202ENST00000417448 FAM178BQ8IXR5 827 aa21.15■□□□□ 0.98
VCP-202ENST00000417448 GMCL1P1Q8NEA9 526 aa21.15■□□□□ 0.98
VCP-202ENST00000417448 MKNK2Q9HBH9 465 aa21.15■□□□□ 0.98
VCP-202ENST00000417448 KIF28PB7ZC32 967 aa21.14■□□□□ 0.97
VCP-202ENST00000417448 BMP3P12645 472 aa21.14■□□□□ 0.97
VCP-202ENST00000417448 HAND2P61296 217 aa21.14■□□□□ 0.97
VCP-202ENST00000417448 DUSP28Q4G0W2 176 aa21.14■□□□□ 0.97
VCP-202ENST00000417448 MUM1L1Q5H9M0 696 aa21.14■□□□□ 0.97
VCP-202ENST00000417448 KIAA1211Q6ZU35 1233 aa21.14■□□□□ 0.97
VCP-202ENST00000417448 TICAM2Q86XR7 235 aa21.14■□□□□ 0.97
VCP-202ENST00000417448 GJD3Q8N144 294 aa21.14■□□□□ 0.97
VCP-202ENST00000417448 TRERF1Q96PN7 1200 aa21.14■□□□□ 0.97
VCP-202ENST00000417448 UBE2ZQ9H832 354 aaPredicted RBP21.14■□□□□ 0.97
VCP-202ENST00000417448 MTMR4Q9NYA4 1195 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms