RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 PSRC1Q6PGN9 363 aaPredicted RBP17.44■□□□□ 0.38
RPS28-201ENST00000417088 SLC30A10Q6XR72 485 aa17.44■□□□□ 0.38
RPS28-201ENST00000417088 MFSD6Q6ZSS7 791 aa17.44■□□□□ 0.38
RPS28-201ENST00000417088 TBC1D10CQ8IV04 446 aa17.44■□□□□ 0.38
RPS28-201ENST00000417088 RILPL2Q969X0 211 aa17.44■□□□□ 0.38
RPS28-201ENST00000417088 SEZ6LQ9BYH1 1024 aa17.44■□□□□ 0.38
RPS28-201ENST00000417088 TRPV6Q9H1D0 765 aa17.44■□□□□ 0.38
RPS28-201ENST00000417088 HIPK3Q9H422 1215 aa17.44■□□□□ 0.38
RPS28-201ENST00000417088 ZNF576Q9H609 170 aa17.44■□□□□ 0.38
RPS28-201ENST00000417088 UMODL1Q5DID0 1318 aa17.44■□□□□ 0.38
RPS28-201ENST00000417088 LOC102724159A0A0B4J2E5 919 aa17.43■□□□□ 0.38
RPS28-201ENST00000417088 RBM47A0AV96 593 aaKnown RBP17.43■□□□□ 0.38
RPS28-201ENST00000417088 PTPDC1A2A3K4 754 aa17.43■□□□□ 0.38
RPS28-201ENST00000417088 SNHG28P0DPA3 235 aa17.43■□□□□ 0.38
RPS28-201ENST00000417088 PCP11498 1178 aaKnown RBP17.43■□□□□ 0.38
RPS28-201ENST00000417088 PBX2P40425 430 aa17.43■□□□□ 0.38
RPS28-201ENST00000417088 PWP2Q15269 919 aaKnown RBP17.43■□□□□ 0.38
RPS28-201ENST00000417088 SMC5Q8IY18 1101 aa17.43■□□□□ 0.38
RPS28-201ENST00000417088 PBX4Q9BYU1 374 aa17.43■□□□□ 0.38
RPS28-201ENST00000417088 WDR11Q9BZH6 1224 aa17.43■□□□□ 0.38
RPS28-201ENST00000417088 B4GALT4O60513 344 aa17.42■□□□□ 0.38
RPS28-201ENST00000417088 SDSP20132 328 aa17.42■□□□□ 0.38
RPS28-201ENST00000417088 CALML3P27482 149 aa17.42■□□□□ 0.38
RPS28-201ENST00000417088 RNF207Q6ZRF8 634 aa17.42■□□□□ 0.38
RPS28-201ENST00000417088 HERVK_113Q902F9 699 aa17.42■□□□□ 0.38
RPS28-201ENST00000417088 NOC4LQ9BVI4 516 aaKnown RBP17.42■□□□□ 0.38
RPS28-201ENST00000417088 PNMA2Q9UL42 364 aa17.42■□□□□ 0.38
RPS28-201ENST00000417088 WDR19Q8NEZ3 1342 aa17.42■□□□□ 0.38
RPS28-201ENST00000417088 FGBP02675 491 aa17.41■□□□□ 0.38
RPS28-201ENST00000417088 CCL23P55773 120 aa17.41■□□□□ 0.38
RPS28-201ENST00000417088 RPS6P62753 249 aaKnown RBP17.41■□□□□ 0.38
RPS28-201ENST00000417088 B4GALNT3Q6L9W6 998 aa17.41■□□□□ 0.38
RPS28-201ENST00000417088 PLEKHM2Q8IWE5 1019 aa17.41■□□□□ 0.38
RPS28-201ENST00000417088 ESR2Q92731 530 aa17.41■□□□□ 0.38
RPS28-201ENST00000417088 WNT8AQ9H1J5 351 aa17.41■□□□□ 0.38
RPS28-201ENST00000417088 RNF41Q9H4P4 317 aaPredicted RBP17.41■□□□□ 0.38
RPS28-201ENST00000417088 CXXC1Q9P0U4 656 aaPredicted RBP17.41■□□□□ 0.38
RPS28-201ENST00000417088 NEDD4P46934 1319 aa17.41■□□□□ 0.38
RPS28-201ENST00000417088 GOLGA8HP0CJ92 632 aa17.4■□□□□ 0.38
RPS28-201ENST00000417088 EDNRBP24530 442 aa17.4■□□□□ 0.38
RPS28-201ENST00000417088 MFAP1P55081 439 aaKnown RBP17.4■□□□□ 0.38
RPS28-201ENST00000417088 AAMPQ13685 434 aa17.4■□□□□ 0.38
RPS28-201ENST00000417088 USP38Q8NB14 1042 aa17.4■□□□□ 0.38
RPS28-201ENST00000417088 ZKSCAN3Q9BRR0 538 aa17.4■□□□□ 0.38
RPS28-201ENST00000417088 ALDH8A1Q9H2A2 487 aaPredicted RBP17.4■□□□□ 0.38
RPS28-201ENST00000417088 RWDD1Q9H446 243 aaPredicted RBP17.4■□□□□ 0.38
RPS28-201ENST00000417088 OSBPL3Q9H4L5 887 aa17.4■□□□□ 0.38
RPS28-201ENST00000417088 POLR3EQ9NVU0 708 aa17.4■□□□□ 0.38
RPS28-201ENST00000417088 TTC28Q96AY4 2481 aa17.4■□□□□ 0.38
RPS28-201ENST00000417088 MYO9BQ13459 2157 aa17.39■□□□□ 0.37
RPS28-201ENST00000417088 ZNF213O14771 459 aa17.39■□□□□ 0.37
RPS28-201ENST00000417088 PURAQ00577 322 aaKnown RBP17.39■□□□□ 0.37
RPS28-201ENST00000417088 PDE4DQ08499 809 aa17.39■□□□□ 0.37
RPS28-201ENST00000417088 GPATCH4Q5T3I0 446 aaKnown RBP17.39■□□□□ 0.37
RPS28-201ENST00000417088 OTOP2Q7RTS6 562 aa17.39■□□□□ 0.37
RPS28-201ENST00000417088 CHD1LQ86WJ1 897 aa17.39■□□□□ 0.37
RPS28-201ENST00000417088 DGKHQ86XP1 1220 aa17.39■□□□□ 0.37
RPS28-201ENST00000417088 DNERQ8NFT8 737 aa17.39■□□□□ 0.37
RPS28-201ENST00000417088 OR6J1Q8NGC5 347 aa17.39■□□□□ 0.37
RPS28-201ENST00000417088 VWCEQ96DN2 955 aa17.39■□□□□ 0.37
RPS28-201ENST00000417088 UBA5Q9GZZ9 404 aa17.39■□□□□ 0.37
RPS28-201ENST00000417088 MTIF3Q9H2K0 278 aaKnown RBP17.39■□□□□ 0.37
RPS28-201ENST00000417088 CPVLQ9H3G5 476 aa17.39■□□□□ 0.37
RPS28-201ENST00000417088 IGHDP01880 384 aa17.38■□□□□ 0.37
RPS28-201ENST00000417088 MYL3P08590 195 aa17.38■□□□□ 0.37
RPS28-201ENST00000417088 CPT1AP50416 773 aa17.38■□□□□ 0.37
RPS28-201ENST00000417088 RAB30Q15771 203 aa17.38■□□□□ 0.37
RPS28-201ENST00000417088 SCLYQ96I15 445 aa17.38■□□□□ 0.37
RPS28-201ENST00000417088 PRDM12Q9H4Q4 367 aa17.38■□□□□ 0.37
RPS28-201ENST00000417088 TRMT13Q9NUP7 481 aaKnown RBP17.38■□□□□ 0.37
RPS28-201ENST00000417088 MSRAQ9UJ68 235 aa17.38■□□□□ 0.37
RPS28-201ENST00000417088 SPTBN5Q9NRC6 3674 aaKnown RBP17.37■□□□□ 0.37
RPS28-201ENST00000417088 NKRFO15226 690 aaKnown RBP eCLIP17.37■□□□□ 0.37
RPS28-201ENST00000417088 KDM4AO75164 1064 aa17.37■□□□□ 0.37
RPS28-201ENST00000417088 SUPT20HL2P0C7V6 817 aa17.37■□□□□ 0.37
RPS28-201ENST00000417088 CYP2C9P11712 490 aa17.37■□□□□ 0.37
RPS28-201ENST00000417088 NUCB1Q02818 461 aa17.37■□□□□ 0.37
RPS28-201ENST00000417088 PPP2R5BQ15173 497 aa17.37■□□□□ 0.37
RPS28-201ENST00000417088 USH1GQ495M9 461 aa17.37■□□□□ 0.37
RPS28-201ENST00000417088 CWC27Q6UX04 472 aaKnown RBP17.37■□□□□ 0.37
RPS28-201ENST00000417088 RPUSD2Q8IZ73 545 aaKnown RBP17.37■□□□□ 0.37
RPS28-201ENST00000417088 PNMA1Q8ND90 353 aa17.37■□□□□ 0.37
RPS28-201ENST00000417088 RGS22Q8NE09 1264 aa17.37■□□□□ 0.37
RPS28-201ENST00000417088 SCFD2Q8WU76 684 aa17.37■□□□□ 0.37
RPS28-201ENST00000417088 ANKS1AQ92625 1134 aa17.37■□□□□ 0.37
RPS28-201ENST00000417088 COPS5Q92905 334 aa17.37■□□□□ 0.37
RPS28-201ENST00000417088 MPHOSPH6Q99547 160 aaKnown RBP17.37■□□□□ 0.37
RPS28-201ENST00000417088 MTG1Q9BT17 334 aaPredicted RBP17.37■□□□□ 0.37
RPS28-201ENST00000417088 GPHNQ9NQX3 736 aaPredicted RBP17.37■□□□□ 0.37
RPS28-201ENST00000417088 TNKSO95271 1327 aa17.37■□□□□ 0.37
RPS28-201ENST00000417088 CHD9Q3L8U1 2897 aa17.37■□□□□ 0.37
RPS28-201ENST00000417088 A6NJR5 290 aa17.36■□□□□ 0.37
RPS28-201ENST00000417088 NT5C2P49902 561 aa17.36■□□□□ 0.37
RPS28-201ENST00000417088 NBPF20Q3BBV1 942 aa17.36■□□□□ 0.37
RPS28-201ENST00000417088 CCDC178Q5BJE1 867 aa17.36■□□□□ 0.37
RPS28-201ENST00000417088 IQCA1Q86XH1 822 aa17.36■□□□□ 0.37
RPS28-201ENST00000417088 TBC1D5Q92609 795 aa17.36■□□□□ 0.37
RPS28-201ENST00000417088 GAS2L1Q99501 681 aaPredicted RBP17.36■□□□□ 0.37
RPS28-201ENST00000417088 NKX2-4Q9H2Z4 354 aa17.36■□□□□ 0.37
RPS28-201ENST00000417088 DIAPH3Q9NSV4 1193 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms