RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 MAGEB6P1A0A0J9YX57 407 aa16.06■□□□□ 0.16
RAPGEF1-204ENST00000414781 ZBED4O75132 1171 aa16.06■□□□□ 0.16
RAPGEF1-204ENST00000414781 EEF2P13639 858 aaKnown RBP16.06■□□□□ 0.16
RAPGEF1-204ENST00000414781 ATP5JP18859 108 aa16.06■□□□□ 0.16
RAPGEF1-204ENST00000414781 LRRFIP1Q32MZ4 808 aaKnown RBP16.06■□□□□ 0.16
RAPGEF1-204ENST00000414781 SUGP1Q8IWZ8 645 aaKnown RBP16.06■□□□□ 0.16
RAPGEF1-204ENST00000414781 PRPF38AQ8NAV1 312 aaKnown RBP16.06■□□□□ 0.16
RAPGEF1-204ENST00000414781 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.06■□□□□ 0.16
RAPGEF1-204ENST00000414781 MTUS1Q9ULD2 1270 aa16.06■□□□□ 0.16
RAPGEF1-204ENST00000414781 SALL3Q9BXA9 1300 aa16.05■□□□□ 0.16
RAPGEF1-204ENST00000414781 H3BQ06 376 aaPredicted RBP16.05■□□□□ 0.16
RAPGEF1-204ENST00000414781 SMPD1P17405 629 aa16.05■□□□□ 0.16
RAPGEF1-204ENST00000414781 IRS1P35568 1242 aa16.05■□□□□ 0.16
RAPGEF1-204ENST00000414781 WDR5P61964 334 aaKnown RBP16.05■□□□□ 0.16
RAPGEF1-204ENST00000414781 IQSEC1Q6DN90 963 aa16.05■□□□□ 0.16
RAPGEF1-204ENST00000414781 PABPC5Q96DU9 382 aaKnown RBP16.05■□□□□ 0.16
RAPGEF1-204ENST00000414781 MRPL38Q96DV4 380 aaKnown RBP16.05■□□□□ 0.16
RAPGEF1-204ENST00000414781 PTPRZ1P23471 2315 aaPredicted RBP16.04■□□□□ 0.16
RAPGEF1-204ENST00000414781 LINC01553A4QN01 128 aa16.04■□□□□ 0.16
RAPGEF1-204ENST00000414781 RAD21O60216 631 aa16.04■□□□□ 0.16
RAPGEF1-204ENST00000414781 GJB5O95377 273 aa16.04■□□□□ 0.16
RAPGEF1-204ENST00000414781 OAZ1P54368 228 aa16.04■□□□□ 0.16
RAPGEF1-204ENST00000414781 TCF15Q12870 199 aa16.04■□□□□ 0.16
RAPGEF1-204ENST00000414781 CPXCR1Q8N123 301 aa16.04■□□□□ 0.16
RAPGEF1-204ENST00000414781 FAM133AQ8N9E0 248 aa16.04■□□□□ 0.16
RAPGEF1-204ENST00000414781 OTUD7AQ8TE49 926 aaPredicted RBP16.04■□□□□ 0.16
RAPGEF1-204ENST00000414781 EDAQ92838 391 aa16.04■□□□□ 0.16
RAPGEF1-204ENST00000414781 DCP1AQ9NPI6 582 aaPredicted RBP16.04■□□□□ 0.16
RAPGEF1-204ENST00000414781 NAV1Q8NEY1 1877 aa16.03■□□□□ 0.16
RAPGEF1-204ENST00000414781 USP17L12C9JPN9 530 aa16.03■□□□□ 0.16
RAPGEF1-204ENST00000414781 USP17L21D6R901 530 aa16.03■□□□□ 0.16
RAPGEF1-204ENST00000414781 EFCAB14O75071 495 aa16.03■□□□□ 0.16
RAPGEF1-204ENST00000414781 SLC4A3P48751 1232 aa16.03■□□□□ 0.16
RAPGEF1-204ENST00000414781 EVX2Q03828 476 aa16.03■□□□□ 0.16
RAPGEF1-204ENST00000414781 COL19A1Q14993 1142 aa16.03■□□□□ 0.16
RAPGEF1-204ENST00000414781 IER5LQ5T953 404 aa16.03■□□□□ 0.16
RAPGEF1-204ENST00000414781 CCDC155Q8N6L0 562 aa16.03■□□□□ 0.16
RAPGEF1-204ENST00000414781 FBXO22Q8NEZ5 403 aa16.03■□□□□ 0.16
RAPGEF1-204ENST00000414781 PBXIP1Q96AQ6 731 aa16.03■□□□□ 0.16
RAPGEF1-204ENST00000414781 TLR7Q9NYK1 1049 aaKnown RBP16.03■□□□□ 0.16
RAPGEF1-204ENST00000414781 MUTYHQ9UIF7 546 aa16.03■□□□□ 0.16
RAPGEF1-204ENST00000414781 NCK2O43639 380 aa16.02■□□□□ 0.16
RAPGEF1-204ENST00000414781 PARNO95453 639 aaKnown RBP16.02■□□□□ 0.16
RAPGEF1-204ENST00000414781 CPT1AP50416 773 aa16.02■□□□□ 0.16
RAPGEF1-204ENST00000414781 PTPN11Q06124 597 aaPredicted RBP16.02■□□□□ 0.16
RAPGEF1-204ENST00000414781 BMP2KLQ5H9B9 411 aa16.02■□□□□ 0.16
RAPGEF1-204ENST00000414781 TTC22Q5TAA0 569 aa16.02■□□□□ 0.16
RAPGEF1-204ENST00000414781 NFRKBQ6P4R8 1299 aa16.02■□□□□ 0.16
RAPGEF1-204ENST00000414781 AMOTL1Q8IY63 956 aa16.02■□□□□ 0.16
RAPGEF1-204ENST00000414781 DYNLL2Q96FJ2 89 aa16.02■□□□□ 0.16
RAPGEF1-204ENST00000414781 MTG1Q9BT17 334 aaPredicted RBP16.02■□□□□ 0.16
RAPGEF1-204ENST00000414781 SLC38A10Q9HBR0 1119 aa16.02■□□□□ 0.16
RAPGEF1-204ENST00000414781 TMEM221A6NGB7 291 aa16.01■□□□□ 0.15
RAPGEF1-204ENST00000414781 M0R296 226 aa16.01■□□□□ 0.15
RAPGEF1-204ENST00000414781 CYP2D6P10635 497 aa16.01■□□□□ 0.15
RAPGEF1-204ENST00000414781 PURAQ00577 322 aaKnown RBP16.01■□□□□ 0.15
RAPGEF1-204ENST00000414781 CNTN2Q02246 1040 aa16.01■□□□□ 0.15
RAPGEF1-204ENST00000414781 FAM47CQ5HY64 1035 aa16.01■□□□□ 0.15
RAPGEF1-204ENST00000414781 CNKSR3Q6P9H4 555 aa16.01■□□□□ 0.15
RAPGEF1-204ENST00000414781 TRIM67Q6ZTA4 783 aa16.01■□□□□ 0.15
RAPGEF1-204ENST00000414781 TICAM2Q86XR7 235 aa16.01■□□□□ 0.15
RAPGEF1-204ENST00000414781 CAGE1Q8TC20 777 aa16.01■□□□□ 0.15
RAPGEF1-204ENST00000414781 PI4K2BQ8TCG2 481 aa16.01■□□□□ 0.15
RAPGEF1-204ENST00000414781 AFAP1L1Q8TED9 768 aa16.01■□□□□ 0.15
RAPGEF1-204ENST00000414781 HAUS7Q99871 368 aa16.01■□□□□ 0.15
RAPGEF1-204ENST00000414781 ACAD9Q9H845 621 aa16.01■□□□□ 0.15
RAPGEF1-204ENST00000414781 RAVER2Q9HCJ3 691 aaKnown RBP16.01■□□□□ 0.15
RAPGEF1-204ENST00000414781 VTA1Q9NP79 307 aa16.01■□□□□ 0.15
RAPGEF1-204ENST00000414781 GPHNQ9NQX3 736 aaPredicted RBP16.01■□□□□ 0.15
RAPGEF1-204ENST00000414781 NOD1Q9Y239 953 aa16.01■□□□□ 0.15
RAPGEF1-204ENST00000414781 ABHD14A-ACY1A0A1B0GW23 586 aa16■□□□□ 0.15
RAPGEF1-204ENST00000414781 CDK8P49336 464 aa16■□□□□ 0.15
RAPGEF1-204ENST00000414781 DEFB103AP81534 67 aa16■□□□□ 0.15
RAPGEF1-204ENST00000414781 TTF1Q15361 905 aaPredicted RBP16■□□□□ 0.15
RAPGEF1-204ENST00000414781 SMAD2Q15796 467 aaKnown RBP16■□□□□ 0.15
RAPGEF1-204ENST00000414781 BRDTQ58F21 947 aaPredicted RBP16■□□□□ 0.15
RAPGEF1-204ENST00000414781 RNF135Q8IUD6 432 aa16■□□□□ 0.15
RAPGEF1-204ENST00000414781 FBXL6Q8N531 539 aa16■□□□□ 0.15
RAPGEF1-204ENST00000414781 BANK1Q8NDB2 785 aa16■□□□□ 0.15
RAPGEF1-204ENST00000414781 SDR42E1Q8WUS8 393 aa16■□□□□ 0.15
RAPGEF1-204ENST00000414781 EVI5LQ96CN4 794 aa16■□□□□ 0.15
RAPGEF1-204ENST00000414781 SAMD11Q96NU1 681 aa16■□□□□ 0.15
RAPGEF1-204ENST00000414781 BOLA2Q9H3K6 86 aa16■□□□□ 0.15
RAPGEF1-204ENST00000414781 TECTAO75443 2155 aa16■□□□□ 0.15
RAPGEF1-204ENST00000414781 TANC1Q9C0D5 1861 aa15.99■□□□□ 0.15
RAPGEF1-204ENST00000414781 TRIM6-TRIM34B2RNG4 842 aa15.99■□□□□ 0.15
RAPGEF1-204ENST00000414781 KPNA6O60684 536 aa15.99■□□□□ 0.15
RAPGEF1-204ENST00000414781 FDX1P10109 184 aa15.99■□□□□ 0.15
RAPGEF1-204ENST00000414781 DUSP28Q4G0W2 176 aa15.99■□□□□ 0.15
RAPGEF1-204ENST00000414781 TAPT1Q6NXT6 567 aa15.99■□□□□ 0.15
RAPGEF1-204ENST00000414781 EP400NLQ6ZTU2 488 aa15.99■□□□□ 0.15
RAPGEF1-204ENST00000414781 C16orf86Q6ZW13 317 aa15.99■□□□□ 0.15
RAPGEF1-204ENST00000414781 SKAP1Q86WV1 359 aa15.99■□□□□ 0.15
RAPGEF1-204ENST00000414781 ATOH1Q92858 354 aaPredicted RBP15.99■□□□□ 0.15
RAPGEF1-204ENST00000414781 NUP88Q99567 741 aaPredicted RBP15.99■□□□□ 0.15
RAPGEF1-204ENST00000414781 INSL6Q9Y581 213 aa15.99■□□□□ 0.15
RAPGEF1-204ENST00000414781 MCM3APO60318 1980 aa15.98■□□□□ 0.15
RAPGEF1-204ENST00000414781 RAD50Q92878 1312 aa15.98■□□□□ 0.15
RAPGEF1-204ENST00000414781 SOWAHBA6NEL2 793 aa15.98■□□□□ 0.15
RAPGEF1-204ENST00000414781 PROB1E7EW31 1015 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms