RNA–Protein interactions for RNA: ENST00000414670.2

ITGB1-203, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-203ENST00000414670 NMRK2Q9NPI5 230 aa7.08□□□□□ -1.28
ITGB1-203ENST00000414670 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.08□□□□□ -1.28
ITGB1-203ENST00000414670 TMEM260Q9NX78 707 aa7.08□□□□□ -1.28
ITGB1-203ENST00000414670 BIN2Q9UBW5 565 aaPredicted RBP7.08□□□□□ -1.28
ITGB1-203ENST00000414670 PCDHA7Q9UN72 937 aa7.08□□□□□ -1.28
ITGB1-203ENST00000414670 PCDHB6Q9Y5E3 794 aa7.08□□□□□ -1.28
ITGB1-203ENST00000414670 A0A1W2PQ27 194 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 A0A1W2PQ64 194 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 A0A1W2PQD8 194 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 UNCXA6NJT0 531 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 USP17L15C9J2P7 530 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 USP17L13C9JLJ4 530 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 USP17L11C9JVI0 530 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 USP17L18D6R9N7 530 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 USP17L22D6RA61 530 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 USP17L17D6RBQ6 530 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 USP17L19D6RCP7 530 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 USP17L20D6RJB6 530 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 TRAF5O00463 557 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 WNT7AO00755 349 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 CXCL11O14625 94 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 RIOK3O14730 519 aaKnown RBP7.07□□□□□ -1.28
ITGB1-203ENST00000414670 NEMFO60524 1076 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 CUTAO60888 179 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 ZBED4O75132 1171 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 ICAM1P05362 532 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 FDX1P10109 184 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 PTPREP23469 700 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 CLK2P49760 499 aaKnown RBP7.07□□□□□ -1.28
ITGB1-203ENST00000414670 USP17L24Q0WX57 530 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 TERF2Q15554 542 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 ZNF174Q15697 407 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 UBE2SQ16763 222 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 INF2Q27J81 1249 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 USH1GQ495M9 461 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 AXDND1Q5T1B0 1012 aaPredicted RBP7.07□□□□□ -1.28
ITGB1-203ENST00000414670 LDLRAD1Q5T700 205 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 MCTP2Q6DN12 878 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 CCDC174Q6PII3 467 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 CCAR1Q8IX12 1150 aaKnown RBP7.07□□□□□ -1.28
ITGB1-203ENST00000414670 REM2Q8IYK8 340 aaPredicted RBP7.07□□□□□ -1.28
ITGB1-203ENST00000414670 KRI1Q8N9T8 703 aaKnown RBP7.07□□□□□ -1.28
ITGB1-203ENST00000414670 FSIP1Q8NA03 581 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 ZNF526Q8TF50 670 aaPredicted RBP7.07□□□□□ -1.28
ITGB1-203ENST00000414670 OTUD5Q96G74 571 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 CLMNQ96JQ2 1002 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 ZNF408Q9H9D4 720 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 PRDM10Q9NQV6 1147 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 CALCOCO1Q9P1Z2 691 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 PNMA2Q9UL42 364 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 PPP1R9AQ9ULJ8 1098 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 MRPL11Q9Y3B7 192 aaKnown RBP7.07□□□□□ -1.28
ITGB1-203ENST00000414670 CTDP1Q9Y5B0 961 aaPredicted RBP7.07□□□□□ -1.28
ITGB1-203ENST00000414670 WDR90Q96KV7 1748 aa7.07□□□□□ -1.28
ITGB1-203ENST00000414670 ABCB11O95342 1321 aa7.06□□□□□ -1.28
ITGB1-203ENST00000414670 A0A0G2JLL6 359 aaPredicted RBP7.06□□□□□ -1.28
ITGB1-203ENST00000414670 A0A0U1RQG5 324 aaPredicted RBP7.06□□□□□ -1.28
ITGB1-203ENST00000414670 MEIS2O14770 477 aa7.06□□□□□ -1.28
ITGB1-203ENST00000414670 IRF6O14896 467 aa7.06□□□□□ -1.28
ITGB1-203ENST00000414670 FOSP01100 380 aaPredicted RBP7.06□□□□□ -1.28
ITGB1-203ENST00000414670 TAL1P17542 331 aaPredicted RBP7.06□□□□□ -1.28
ITGB1-203ENST00000414670 LIG1P18858 919 aa7.06□□□□□ -1.28
ITGB1-203ENST00000414670 CMA1P23946 247 aa7.06□□□□□ -1.28
ITGB1-203ENST00000414670 MCM7P33993 719 aa7.06□□□□□ -1.28
ITGB1-203ENST00000414670 FKBP1BP68106 108 aa7.06□□□□□ -1.28
ITGB1-203ENST00000414670 ATP2C1P98194 919 aaPredicted RBP7.06□□□□□ -1.28
ITGB1-203ENST00000414670 FMR1Q06787 632 aaKnown RBP eCLIP7.06□□□□□ -1.28
ITGB1-203ENST00000414670 PTGDRQ13258 359 aa7.06□□□□□ -1.28
ITGB1-203ENST00000414670 PPIL2Q13356 520 aa7.06□□□□□ -1.28
ITGB1-203ENST00000414670 AP3B2Q13367 1082 aa7.06□□□□□ -1.28
ITGB1-203ENST00000414670 ORC2Q13416 577 aaPredicted RBP7.06□□□□□ -1.28
ITGB1-203ENST00000414670 COG2Q14746 738 aa7.06□□□□□ -1.28
ITGB1-203ENST00000414670 USP17L6PQ6QN14 398 aa7.06□□□□□ -1.28
ITGB1-203ENST00000414670 CATSPERGQ6ZRH7 1159 aa7.06□□□□□ -1.28
ITGB1-203ENST00000414670 CCDC73Q6ZRK6 1079 aa7.06□□□□□ -1.28
ITGB1-203ENST00000414670 PRRT2Q7Z6L0 340 aaPredicted RBP7.06□□□□□ -1.28
ITGB1-203ENST00000414670 NEK8Q86SG6 692 aa7.06□□□□□ -1.28
ITGB1-203ENST00000414670 CPXCR1Q8N123 301 aa7.06□□□□□ -1.28
ITGB1-203ENST00000414670 TBCKQ8TEA7 893 aa7.06□□□□□ -1.28
ITGB1-203ENST00000414670 MRPS27Q92552 414 aaKnown RBP7.06□□□□□ -1.28
ITGB1-203ENST00000414670 FERMT2Q96AC1 680 aa7.06□□□□□ -1.28
ITGB1-203ENST00000414670 ATG4CQ96DT6 458 aa7.06□□□□□ -1.28
ITGB1-203ENST00000414670 SLC10A4Q96EP9 437 aa7.06□□□□□ -1.28
ITGB1-203ENST00000414670 SLC38A10Q9HBR0 1119 aa7.06□□□□□ -1.28
ITGB1-203ENST00000414670 GBA2Q9HCG7 927 aaPredicted RBP7.06□□□□□ -1.28
ITGB1-203ENST00000414670 DDX19AQ9NUU7 478 aaKnown RBP7.06□□□□□ -1.28
ITGB1-203ENST00000414670 FBXO2Q9UK22 296 aaPredicted RBP7.06□□□□□ -1.28
ITGB1-203ENST00000414670 CCPG1Q9ULG6 757 aa7.06□□□□□ -1.28
ITGB1-203ENST00000414670 KCNH4Q9UQ05 1017 aa7.06□□□□□ -1.28
ITGB1-203ENST00000414670 SRPRBQ9Y5M8 271 aaKnown RBP7.06□□□□□ -1.28
ITGB1-203ENST00000414670 ZNF536O15090 1300 aa7.05□□□□□ -1.28
ITGB1-203ENST00000414670 MYPNQ86TC9 1320 aa7.05□□□□□ -1.28
ITGB1-203ENST00000414670 A0A1B0GVL5 298 aa7.05□□□□□ -1.28
ITGB1-203ENST00000414670 SPDYE3A6NKU9 549 aa7.05□□□□□ -1.28
ITGB1-203ENST00000414670 GCOM1H8Y6P7 765 aaPredicted RBP7.05□□□□□ -1.28
ITGB1-203ENST00000414670 PIK3CDO00329 1044 aa7.05□□□□□ -1.28
ITGB1-203ENST00000414670 VWA5AO00534 786 aa7.05□□□□□ -1.28
ITGB1-203ENST00000414670 OPLAHO14841 1288 aa7.05□□□□□ -1.28
ITGB1-203ENST00000414670 CCNT1O60563 726 aaKnown RBP7.05□□□□□ -1.28
ITGB1-203ENST00000414670 NR1I2O75469 434 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms