RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 EIF3JO75822 258 aaKnown RBP16.73■□□□□ 0.27
TTC39A-208ENST00000413473 MIIPQ5JXC2 388 aa16.73■□□□□ 0.27
TTC39A-208ENST00000413473 PAPD7Q5XG87 772 aaKnown RBP16.73■□□□□ 0.27
TTC39A-208ENST00000413473 FAM114A1Q8IWE2 563 aa16.73■□□□□ 0.27
TTC39A-208ENST00000413473 RNF216Q9NWF9 866 aaPredicted RBP16.73■□□□□ 0.27
TTC39A-208ENST00000413473 RTCBQ9Y3I0 505 aaKnown RBP16.73■□□□□ 0.27
TTC39A-208ENST00000413473 BTDP43251 543 aa16.72■□□□□ 0.27
TTC39A-208ENST00000413473 AMPD3Q01432 767 aa16.72■□□□□ 0.27
TTC39A-208ENST00000413473 CYP27A1Q02318 531 aa16.72■□□□□ 0.27
TTC39A-208ENST00000413473 SOGA3Q5TF21 947 aa16.72■□□□□ 0.27
TTC39A-208ENST00000413473 ZNF804AQ7Z570 1209 aa16.72■□□□□ 0.27
TTC39A-208ENST00000413473 NEDD1Q8NHV4 660 aa16.72■□□□□ 0.27
TTC39A-208ENST00000413473 CAPZA3Q96KX2 299 aa16.72■□□□□ 0.27
TTC39A-208ENST00000413473 PIGSQ96S52 555 aa16.72■□□□□ 0.27
TTC39A-208ENST00000413473 DUSP10Q9Y6W6 482 aa16.72■□□□□ 0.27
TTC39A-208ENST00000413473 MYH1P12882 1939 aa16.72■□□□□ 0.27
TTC39A-208ENST00000413473 IPO7O95373 1038 aaKnown RBP16.72■□□□□ 0.27
TTC39A-208ENST00000413473 TXKP42681 527 aa16.72■□□□□ 0.27
TTC39A-208ENST00000413473 GRAPQ13588 217 aa16.72■□□□□ 0.27
TTC39A-208ENST00000413473 WDR93Q6P2C0 686 aa16.72■□□□□ 0.27
TTC39A-208ENST00000413473 ZNF662Q6ZS27 426 aa16.72■□□□□ 0.27
TTC39A-208ENST00000413473 MSL3Q8N5Y2 521 aaKnown RBP16.72■□□□□ 0.27
TTC39A-208ENST00000413473 GRAPLQ8TC17 118 aaPredicted RBP16.72■□□□□ 0.27
TTC39A-208ENST00000413473 UBA5Q9GZZ9 404 aa16.72■□□□□ 0.27
TTC39A-208ENST00000413473 SLC39A2Q9NP94 309 aa16.72■□□□□ 0.27
TTC39A-208ENST00000413473 SEC63Q9UGP8 760 aaKnown RBP16.72■□□□□ 0.27
TTC39A-208ENST00000413473 EIF3CLB5ME19 914 aaKnown RBP16.71■□□□□ 0.27
TTC39A-208ENST00000413473 LMAN1P49257 510 aa16.71■□□□□ 0.27
TTC39A-208ENST00000413473 C16orf86Q6ZW13 317 aa16.71■□□□□ 0.27
TTC39A-208ENST00000413473 POTEDQ86YR6 584 aa16.71■□□□□ 0.27
TTC39A-208ENST00000413473 TEX11Q8IYF3 940 aa16.71■□□□□ 0.27
TTC39A-208ENST00000413473 CCDC170Q8IYT3 715 aa16.71■□□□□ 0.27
TTC39A-208ENST00000413473 KIAA0895Q8NCT3 520 aa16.71■□□□□ 0.27
TTC39A-208ENST00000413473 CALML4Q96GE6 196 aa16.71■□□□□ 0.27
TTC39A-208ENST00000413473 EIF3CQ99613 913 aaKnown RBP16.71■□□□□ 0.27
TTC39A-208ENST00000413473 SEMA6BQ9H3T3 888 aa16.71■□□□□ 0.27
TTC39A-208ENST00000413473 USP14P54578 494 aa16.71■□□□□ 0.27
TTC39A-208ENST00000413473 CNNM4Q6P4Q7 775 aa16.71■□□□□ 0.27
TTC39A-208ENST00000413473 ZSCAN29Q8IWY8 852 aaPredicted RBP16.71■□□□□ 0.27
TTC39A-208ENST00000413473 EHBP1Q8NDI1 1231 aa16.71■□□□□ 0.27
TTC39A-208ENST00000413473 CEP95Q96GE4 821 aa16.71■□□□□ 0.27
TTC39A-208ENST00000413473 TMEM260Q9NX78 707 aa16.71■□□□□ 0.27
TTC39A-208ENST00000413473 LRRIQ3A6PVS8 624 aaPredicted RBP16.7■□□□□ 0.26
TTC39A-208ENST00000413473 ERGIC2Q96RQ1 377 aa16.7■□□□□ 0.26
TTC39A-208ENST00000413473 PSD3Q9NYI0 1048 aa16.7■□□□□ 0.26
TTC39A-208ENST00000413473 ZNF831Q5JPB2 1677 aa16.7■□□□□ 0.26
TTC39A-208ENST00000413473 PPP1R2P41236 205 aa16.7■□□□□ 0.26
TTC39A-208ENST00000413473 FKBP15Q5T1M5 1219 aa16.7■□□□□ 0.26
TTC39A-208ENST00000413473 SV2BQ7L1I2 683 aa16.7■□□□□ 0.26
TTC39A-208ENST00000413473 REXO1Q8N1G1 1221 aaKnown RBP16.7■□□□□ 0.26
TTC39A-208ENST00000413473 CCDC102AQ96A19 550 aa16.7■□□□□ 0.26
TTC39A-208ENST00000413473 CCNL1Q9UK58 526 aaPredicted RBP16.7■□□□□ 0.26
TTC39A-208ENST00000413473 FAN1Q9Y2M0 1017 aa16.7■□□□□ 0.26
TTC39A-208ENST00000413473 SNED1Q8TER0 1413 aa16.7■□□□□ 0.26
TTC39A-208ENST00000413473 MACROD2A1Z1Q3 448 aa16.69■□□□□ 0.26
TTC39A-208ENST00000413473 USP17L5A8MUK1 530 aa16.69■□□□□ 0.26
TTC39A-208ENST00000413473 CENPPQ6IPU0 288 aa16.69■□□□□ 0.26
TTC39A-208ENST00000413473 GPR75-ASB3A0A0A6YYF3 556 aa16.69■□□□□ 0.26
TTC39A-208ENST00000413473 GRB10Q13322 594 aa16.69■□□□□ 0.26
TTC39A-208ENST00000413473 KRT26Q7Z3Y9 468 aa16.69■□□□□ 0.26
TTC39A-208ENST00000413473 CCDC42Q96M95 316 aa16.69■□□□□ 0.26
TTC39A-208ENST00000413473 CD209Q9NNX6 404 aa16.69■□□□□ 0.26
TTC39A-208ENST00000413473 LRWD1Q9UFC0 647 aa16.69■□□□□ 0.26
TTC39A-208ENST00000413473 NAV1Q8NEY1 1877 aa16.69■□□□□ 0.26
TTC39A-208ENST00000413473 MYMKA6NI61 221 aa16.69■□□□□ 0.26
TTC39A-208ENST00000413473 ZNF263O14978 683 aa16.69■□□□□ 0.26
TTC39A-208ENST00000413473 ZNF185O15231 689 aa16.69■□□□□ 0.26
TTC39A-208ENST00000413473 PLEKP08567 350 aaPredicted RBP16.69■□□□□ 0.26
TTC39A-208ENST00000413473 KIF5AQ12840 1032 aa16.69■□□□□ 0.26
TTC39A-208ENST00000413473 ZSCAN26Q16670 478 aa16.69■□□□□ 0.26
TTC39A-208ENST00000413473 FIGNQ5HY92 759 aa16.69■□□□□ 0.26
TTC39A-208ENST00000413473 DYMQ7RTS9 669 aa16.69■□□□□ 0.26
TTC39A-208ENST00000413473 BLOC1S4Q9NUP1 217 aa16.69■□□□□ 0.26
TTC39A-208ENST00000413473 COL24A1Q17RW2 1714 aa16.68■□□□□ 0.26
TTC39A-208ENST00000413473 A0A1W2PQJ5 194 aa16.68■□□□□ 0.26
TTC39A-208ENST00000413473 PHACTR2O75167 634 aa16.68■□□□□ 0.26
TTC39A-208ENST00000413473 GPSM2P81274 684 aa16.68■□□□□ 0.26
TTC39A-208ENST00000413473 HSP90B2PQ58FF3 399 aa16.68■□□□□ 0.26
TTC39A-208ENST00000413473 MTMR9Q96QG7 549 aa16.68■□□□□ 0.26
TTC39A-208ENST00000413473 IDEP14735 1019 aa16.68■□□□□ 0.26
TTC39A-208ENST00000413473 SMARCA1P28370 1054 aa16.68■□□□□ 0.26
TTC39A-208ENST00000413473 RFC4P35249 363 aa16.68■□□□□ 0.26
TTC39A-208ENST00000413473 CDK17Q00537 523 aa16.68■□□□□ 0.26
TTC39A-208ENST00000413473 CALCRLQ16602 461 aa16.68■□□□□ 0.26
TTC39A-208ENST00000413473 COBLL1Q53SF7 1204 aa16.68■□□□□ 0.26
TTC39A-208ENST00000413473 COA7Q96BR5 231 aa16.68■□□□□ 0.26
TTC39A-208ENST00000413473 PNMA5Q96PV4 448 aa16.68■□□□□ 0.26
TTC39A-208ENST00000413473 JADE2Q9NQC1 790 aa16.68■□□□□ 0.26
TTC39A-208ENST00000413473 FRMPD2Q68DX3 1309 aaPredicted RBP16.67■□□□□ 0.26
TTC39A-208ENST00000413473 PDE2AO00408 941 aaPredicted RBP16.67■□□□□ 0.26
TTC39A-208ENST00000413473 VAV2P52735 878 aa16.67■□□□□ 0.26
TTC39A-208ENST00000413473 CKAP4Q07065 602 aaKnown RBP16.67■□□□□ 0.26
TTC39A-208ENST00000413473 SPA17Q15506 151 aa16.67■□□□□ 0.26
TTC39A-208ENST00000413473 CAGE1Q8TC20 777 aa16.67■□□□□ 0.26
TTC39A-208ENST00000413473 TRERF1Q96PN7 1200 aa16.67■□□□□ 0.26
TTC39A-208ENST00000413473 PURBQ96QR8 312 aaKnown RBP16.67■□□□□ 0.26
TTC39A-208ENST00000413473 NDST4Q9H3R1 872 aa16.67■□□□□ 0.26
TTC39A-208ENST00000413473 FAM207AQ9NSI2 230 aaPredicted RBP16.67■□□□□ 0.26
TTC39A-208ENST00000413473 PLAGL2Q9UPG8 496 aa16.67■□□□□ 0.26
TTC39A-208ENST00000413473 EPHB6O15197 1021 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms