RNA–Protein interactions for RNA: ENST00000409047.2

TUBA3D-202, Transcript of tubulin alpha 3d, humanhuman

TSL 2

Gene TUBA3D, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-202ENST00000409047 RCSD1Q6JBY9 416 aa15.55■□□□□ 0.08
TUBA3D-202ENST00000409047 DCTPP1Q9H773 170 aa15.55■□□□□ 0.08
TUBA3D-202ENST00000409047 VTA1Q9NP79 307 aa15.55■□□□□ 0.08
TUBA3D-202ENST00000409047 MTCH2Q9Y6C9 303 aa15.55■□□□□ 0.08
TUBA3D-202ENST00000409047 RBM47A0AV96 593 aaKnown RBP15.54■□□□□ 0.08
TUBA3D-202ENST00000409047 ZEB2O60315 1214 aa15.54■□□□□ 0.08
TUBA3D-202ENST00000409047 ATP2A2P16615 1042 aaKnown RBP15.54■□□□□ 0.08
TUBA3D-202ENST00000409047 PLA2G5P39877 138 aa15.54■□□□□ 0.08
TUBA3D-202ENST00000409047 PDE4BQ07343 736 aa15.54■□□□□ 0.08
TUBA3D-202ENST00000409047 KRT40Q6A162 431 aa15.54■□□□□ 0.08
TUBA3D-202ENST00000409047 KIAA1211Q6ZU35 1233 aa15.54■□□□□ 0.08
TUBA3D-202ENST00000409047 RPUSD2Q8IZ73 545 aaKnown RBP15.54■□□□□ 0.08
TUBA3D-202ENST00000409047 PI4K2BQ8TCG2 481 aa15.54■□□□□ 0.08
TUBA3D-202ENST00000409047 TNKSO95271 1327 aa15.53■□□□□ 0.08
TUBA3D-202ENST00000409047 NFIBO00712 420 aa15.53■□□□□ 0.08
TUBA3D-202ENST00000409047 ERC2O15083 957 aa15.53■□□□□ 0.08
TUBA3D-202ENST00000409047 CA3P07451 260 aa15.53■□□□□ 0.08
TUBA3D-202ENST00000409047 ZMYM1Q5SVZ6 1142 aa15.53■□□□□ 0.08
TUBA3D-202ENST00000409047 TTBK2Q6IQ55 1244 aa15.53■□□□□ 0.08
TUBA3D-202ENST00000409047 PPP1R13LQ8WUF5 828 aa15.53■□□□□ 0.08
TUBA3D-202ENST00000409047 RANBP17Q9H2T7 1088 aaKnown RBP15.53■□□□□ 0.08
TUBA3D-202ENST00000409047 COL4A4P53420 1690 aaPredicted RBP15.52■□□□□ 0.08
TUBA3D-202ENST00000409047 ZBBXA8MT70 800 aa15.52■□□□□ 0.08
TUBA3D-202ENST00000409047 ICAM1P05362 532 aa15.52■□□□□ 0.08
TUBA3D-202ENST00000409047 PFKMP08237 780 aa15.52■□□□□ 0.08
TUBA3D-202ENST00000409047 ALDH5A1P51649 535 aaPredicted RBP15.52■□□□□ 0.08
TUBA3D-202ENST00000409047 CTDSPL2Q05D32 466 aa15.52■□□□□ 0.08
TUBA3D-202ENST00000409047 IKQ13123 557 aaPredicted RBP15.52■□□□□ 0.08
TUBA3D-202ENST00000409047 BAATQ14032 418 aaPredicted RBP15.52■□□□□ 0.08
TUBA3D-202ENST00000409047 BTNL9Q6UXG8 535 aa15.52■□□□□ 0.08
TUBA3D-202ENST00000409047 NSMFQ6X4W1 530 aa15.52■□□□□ 0.08
TUBA3D-202ENST00000409047 SPRED2Q7Z698 418 aa15.52■□□□□ 0.08
TUBA3D-202ENST00000409047 MICALL1Q8N3F8 863 aa15.52■□□□□ 0.08
TUBA3D-202ENST00000409047 OTUD7AQ8TE49 926 aaPredicted RBP15.52■□□□□ 0.08
TUBA3D-202ENST00000409047 CLEC4DQ8WXI8 215 aa15.52■□□□□ 0.08
TUBA3D-202ENST00000409047 NAPBQ9H115 298 aa15.52■□□□□ 0.08
TUBA3D-202ENST00000409047 CHMP4BQ9H444 224 aaKnown RBP15.52■□□□□ 0.08
TUBA3D-202ENST00000409047 CCPG1Q9ULG6 757 aa15.52■□□□□ 0.08
TUBA3D-202ENST00000409047 STX8Q9UNK0 236 aa15.52■□□□□ 0.08
TUBA3D-202ENST00000409047 RBAK-RBAKDNI3L0D1 243 aa15.51■□□□□ 0.07
TUBA3D-202ENST00000409047 SLC16A2P36021 539 aa15.51■□□□□ 0.07
TUBA3D-202ENST00000409047 TAP1Q03518 808 aa15.51■□□□□ 0.07
TUBA3D-202ENST00000409047 GPNMBQ14956 572 aa15.51■□□□□ 0.07
TUBA3D-202ENST00000409047 TMEM67Q5HYA8 995 aa15.51■□□□□ 0.07
TUBA3D-202ENST00000409047 DEFB128Q7Z7B8 93 aa15.51■□□□□ 0.07
TUBA3D-202ENST00000409047 CTAGE1Q96RT6 745 aa15.51■□□□□ 0.07
TUBA3D-202ENST00000409047 WDR11Q9BZH6 1224 aa15.51■□□□□ 0.07
TUBA3D-202ENST00000409047 NACAP1Q9BZK3 213 aa15.51■□□□□ 0.07
TUBA3D-202ENST00000409047 CERS4Q9HA82 394 aa15.51■□□□□ 0.07
TUBA3D-202ENST00000409047 ISY1Q9ULR0 285 aaKnown RBP15.51■□□□□ 0.07
TUBA3D-202ENST00000409047 LPXNO60711 386 aa15.5■□□□□ 0.07
TUBA3D-202ENST00000409047 FGRP09769 529 aa15.5■□□□□ 0.07
TUBA3D-202ENST00000409047 EDNRBP24530 442 aa15.5■□□□□ 0.07
TUBA3D-202ENST00000409047 NBPF20Q3BBV1 942 aa15.5■□□□□ 0.07
TUBA3D-202ENST00000409047 SLC30A10Q6XR72 485 aa15.5■□□□□ 0.07
TUBA3D-202ENST00000409047 POLR3EQ9NVU0 708 aa15.5■□□□□ 0.07
TUBA3D-202ENST00000409047 ANAPC4Q9UJX5 808 aa15.5■□□□□ 0.07
TUBA3D-202ENST00000409047 TTC41PQ6P2S7 1318 aa15.49■□□□□ 0.07
TUBA3D-202ENST00000409047 LOC102724159A0A0B4J2E5 919 aa15.49■□□□□ 0.07
TUBA3D-202ENST00000409047 TSPY2A6NKD2 308 aa15.49■□□□□ 0.07
TUBA3D-202ENST00000409047 TLL1O43897 1013 aa15.49■□□□□ 0.07
TUBA3D-202ENST00000409047 IQCF3P0C7M6 154 aa15.49■□□□□ 0.07
TUBA3D-202ENST00000409047 SUPT20HL2P0C7V6 817 aa15.49■□□□□ 0.07
TUBA3D-202ENST00000409047 PWP2Q15269 919 aaKnown RBP15.49■□□□□ 0.07
TUBA3D-202ENST00000409047 VPS53Q5VIR6 699 aa15.49■□□□□ 0.07
TUBA3D-202ENST00000409047 DCAF4Q8WV16 495 aa15.49■□□□□ 0.07
TUBA3D-202ENST00000409047 COPS5Q92905 334 aa15.49■□□□□ 0.07
TUBA3D-202ENST00000409047 KHSRPQ92945 711 aaKnown RBP eCLIP15.49■□□□□ 0.07
TUBA3D-202ENST00000409047 GPATCH3Q96I76 525 aa15.49■□□□□ 0.07
TUBA3D-202ENST00000409047 SLC9A7Q96T83 725 aa15.49■□□□□ 0.07
TUBA3D-202ENST00000409047 MTG1Q9BT17 334 aaPredicted RBP15.49■□□□□ 0.07
TUBA3D-202ENST00000409047 EPHX3Q9H6B9 360 aa15.49■□□□□ 0.07
TUBA3D-202ENST00000409047 RCAN3Q9UKA8 241 aa15.49■□□□□ 0.07
TUBA3D-202ENST00000409047 SALL3Q9BXA9 1300 aa15.48■□□□□ 0.07
TUBA3D-202ENST00000409047 A6NJR5 290 aa15.48■□□□□ 0.07
TUBA3D-202ENST00000409047 PITPNM1O00562 1244 aa15.48■□□□□ 0.07
TUBA3D-202ENST00000409047 ARIH2O95376 493 aa15.48■□□□□ 0.07
TUBA3D-202ENST00000409047 SLC3A2P08195 630 aaKnown RBP15.48■□□□□ 0.07
TUBA3D-202ENST00000409047 MYL3P08590 195 aa15.48■□□□□ 0.07
TUBA3D-202ENST00000409047 CPT1AP50416 773 aa15.48■□□□□ 0.07
TUBA3D-202ENST00000409047 NFRKBQ6P4R8 1299 aa15.48■□□□□ 0.07
TUBA3D-202ENST00000409047 HERC6Q8IVU3 1022 aa15.48■□□□□ 0.07
TUBA3D-202ENST00000409047 IL27Q8NEV9 243 aa15.48■□□□□ 0.07
TUBA3D-202ENST00000409047 OR6J1Q8NGC5 347 aa15.48■□□□□ 0.07
TUBA3D-202ENST00000409047 PHOSPHO2Q8TCD6 241 aa15.48■□□□□ 0.07
TUBA3D-202ENST00000409047 TSPYL2Q9H2G4 693 aaPredicted RBP15.48■□□□□ 0.07
TUBA3D-202ENST00000409047 MTMR7Q9Y216 660 aa15.48■□□□□ 0.07
TUBA3D-202ENST00000409047 ORC4O43929 436 aa15.47■□□□□ 0.07
TUBA3D-202ENST00000409047 HOXD11P31277 338 aaPredicted RBP15.47■□□□□ 0.07
TUBA3D-202ENST00000409047 RFC2P35250 354 aa15.47■□□□□ 0.07
TUBA3D-202ENST00000409047 AAK1Q2M2I8 961 aa15.47■□□□□ 0.07
TUBA3D-202ENST00000409047 PPP4R3BQ5MIZ7 849 aa15.47■□□□□ 0.07
TUBA3D-202ENST00000409047 SYDE2Q5VT97 1194 aa15.47■□□□□ 0.07
TUBA3D-202ENST00000409047 LRFN3Q9BTN0 628 aa15.47■□□□□ 0.07
TUBA3D-202ENST00000409047 FSD1Q9BTV5 496 aa15.47■□□□□ 0.07
TUBA3D-202ENST00000409047 C1QTNF1Q9BXJ1 281 aa15.47■□□□□ 0.07
TUBA3D-202ENST00000409047 C11orf16Q9NQ32 467 aa15.47■□□□□ 0.07
TUBA3D-202ENST00000409047 ADD3Q9UEY8 706 aaKnown RBP15.47■□□□□ 0.07
TUBA3D-202ENST00000409047 PTPDC1A2A3K4 754 aa15.46■□□□□ 0.07
TUBA3D-202ENST00000409047 LCHNA4D1U4 455 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms