RNA–Protein interactions for RNA: ENST00000409036.5

RAPGEF4-204, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 5 BASIC

Gene RAPGEF4, Length 3,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-204ENST00000409036 PCDHB6Q9Y5E3 794 aa7.08□□□□□ -1.28
RAPGEF4-204ENST00000409036 USP17L3A6NCW0 530 aa7.08□□□□□ -1.28
RAPGEF4-204ENST00000409036 USP17L4A6NCW7 530 aa7.08□□□□□ -1.28
RAPGEF4-204ENST00000409036 POTEB2H3BUK9 544 aa7.08□□□□□ -1.28
RAPGEF4-204ENST00000409036 KIAA0754O94854 1291 aa7.08□□□□□ -1.28
RAPGEF4-204ENST00000409036 PLCD1P51178 756 aa7.08□□□□□ -1.28
RAPGEF4-204ENST00000409036 MDM2Q00987 491 aaPredicted RBP7.08□□□□□ -1.28
RAPGEF4-204ENST00000409036 SYCP1Q15431 976 aa7.08□□□□□ -1.28
RAPGEF4-204ENST00000409036 NPY5RQ15761 445 aa7.08□□□□□ -1.28
RAPGEF4-204ENST00000409036 FKBP1CQ5VVH2 108 aa7.08□□□□□ -1.28
RAPGEF4-204ENST00000409036 USP17L1Q7RTZ2 530 aa7.08□□□□□ -1.28
RAPGEF4-204ENST00000409036 HEATR3Q7Z4Q2 680 aa7.08□□□□□ -1.28
RAPGEF4-204ENST00000409036 CCDC24Q8N4L8 307 aa7.08□□□□□ -1.28
RAPGEF4-204ENST00000409036 ACRBPQ8NEB7 543 aa7.08□□□□□ -1.28
RAPGEF4-204ENST00000409036 ENOX1Q8TC92 643 aaKnown RBP7.08□□□□□ -1.28
RAPGEF4-204ENST00000409036 MKL1Q969V6 931 aa7.08□□□□□ -1.28
RAPGEF4-204ENST00000409036 EPSTI1Q96J88 318 aa7.08□□□□□ -1.28
RAPGEF4-204ENST00000409036 WDR24Q96S15 920 aa7.08□□□□□ -1.28
RAPGEF4-204ENST00000409036 NAPGQ99747 312 aaPredicted RBP7.08□□□□□ -1.28
RAPGEF4-204ENST00000409036 NYAP2Q9P242 653 aa7.08□□□□□ -1.28
RAPGEF4-204ENST00000409036 TTF2Q9UNY4 1162 aaKnown RBP7.08□□□□□ -1.28
RAPGEF4-204ENST00000409036 STXBP3O00186 592 aa7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 PAFAH1B1P43034 410 aa7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 RBL2Q08999 1139 aa7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 IKQ13123 557 aaPredicted RBP7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 LONRF2Q1L5Z9 754 aa7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 VSTM4Q8IW00 320 aa7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 SLC35F6Q8N357 371 aa7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 MTMR4Q9NYA4 1195 aa7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 MAN1B1Q9UKM7 699 aa7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 ZEB2O60315 1214 aa7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 USO1O60763 962 aaKnown RBP7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 GCFC2P16383 781 aaKnown RBP7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 ASIC1P78348 528 aa7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 MORC3Q14149 939 aa7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 HLTFQ14527 1009 aaKnown RBP eCLIP7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 RNF187Q5TA31 235 aaPredicted RBP7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 SMIM5Q71RC9 77 aa7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 MICALL1Q8N3F8 863 aa7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 GPATCH11Q8N954 259 aa7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 RAB34Q9BZG1 259 aa7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 CCSER1Q9C0I3 900 aa7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 RASSF4Q9H2L5 321 aa7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 WTIPA6NIX2 430 aaPredicted RBP7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 KLRF2D3W0D1 207 aa7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 ACTN4O43707 911 aaKnown RBP7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 STX10O60499 249 aa7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 MRPS25P82663 173 aaKnown RBP7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 SPAG1Q07617 926 aa7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 NONOQ15233 471 aaKnown RBP eCLIP7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 FCHSD1Q86WN1 690 aa7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 IPO4Q8TEX9 1081 aaKnown RBP7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 CCDC42Q96M95 316 aa7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 CAMKK2Q96RR4 588 aa7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 USP40Q9NVE5 1235 aa7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 PI4KBQ9UBF8 816 aa7.07□□□□□ -1.28
RAPGEF4-204ENST00000409036 TEX33O43247 280 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 GTPBP6O43824 516 aaPredicted RBP7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 ATP2C2O75185 946 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 PRR29P0C7W0 189 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 CRKP46108 304 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 TBC1D8BQ0IIM8 1120 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 KIF5AQ12840 1032 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 CCDC93Q567U6 631 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 FOXR2Q6PJQ5 311 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 MOXD1Q6UVY6 613 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 CCDC125Q86Z20 511 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 HDAC9Q9UKV0 1011 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 SHTN1A0MZ66 631 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 PSMA7O14818 248 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 CYLC1P35663 651 aaPredicted RBP7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 BAG6P46379 1132 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 COBLL1Q53SF7 1204 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 DACT2Q5SW24 774 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 IQCEQ6IPM2 695 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 MTMR14Q8NCE2 650 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 GMCL1P1Q8NEA9 526 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 IFT81Q8WYA0 676 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 SYMPKQ92797 1274 aaKnown RBP7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 KANSL2Q9H9L4 492 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 SEPT11Q9NVA2 429 aaKnown RBP7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 HERC5Q9UII4 1024 aaKnown RBP7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 PNMA6FA0A0J9YX94 578 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 GOLGA6L10A6NI86 522 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 KRT86O43790 486 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 KCNB1Q14721 858 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 NYAP1Q6ZVC0 841 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 TMEM179Q6ZVK1 233 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 OXER1Q8TDS5 423 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 C7orf43Q8WVR3 580 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 IQCDQ96DY2 449 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 MTMR8Q96EF0 704 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 DYNLL2Q96FJ2 89 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 CEP89Q96ST8 783 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 UBA5Q9GZZ9 404 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 TMOD2Q9NZR1 351 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 PNMA2Q9UL42 364 aa7.06□□□□□ -1.28
RAPGEF4-204ENST00000409036 ECE2O60344 883 aa7.05□□□□□ -1.28
RAPGEF4-204ENST00000409036 NOP2P46087 812 aaKnown RBP7.05□□□□□ -1.28
RAPGEF4-204ENST00000409036 NAPAP54920 295 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms