RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 CTAGE3PQ8IX95 158 aa14.59□□□□□ -0.07
SNED1-205ENST00000405547 MAGOHBQ96A72 148 aaKnown RBP14.59□□□□□ -0.07
SNED1-205ENST00000405547 IGSF1Q8N6C5 1336 aa14.59□□□□□ -0.07
SNED1-205ENST00000405547 CD19P15391 556 aa14.59□□□□□ -0.07
SNED1-205ENST00000405547 ARHGAP4P98171 946 aa14.59□□□□□ -0.07
SNED1-205ENST00000405547 TMEM2Q9UHN6 1383 aa14.59□□□□□ -0.07
SNED1-205ENST00000405547 M0R2C6 588 aa14.59□□□□□ -0.07
SNED1-205ENST00000405547 NOP56O00567 594 aaKnown RBP14.59□□□□□ -0.07
SNED1-205ENST00000405547 H0YCG3 227 aa14.58□□□□□ -0.07
SNED1-205ENST00000405547 RNASELQ05823 741 aaKnown RBP14.58□□□□□ -0.07
SNED1-205ENST00000405547 PRR16Q569H4 304 aa14.58□□□□□ -0.07
SNED1-205ENST00000405547 CHURC1Q8WUH1 139 aa14.58□□□□□ -0.07
SNED1-205ENST00000405547 PCDHA4Q9UN74 947 aa14.58□□□□□ -0.07
SNED1-205ENST00000405547 TTLL7Q6ZT98 887 aa14.58□□□□□ -0.08
SNED1-205ENST00000405547 KRT26Q7Z3Y9 468 aa14.58□□□□□ -0.08
SNED1-205ENST00000405547 TRPC6Q9Y210 931 aa14.58□□□□□ -0.08
SNED1-205ENST00000405547 POLA2Q14181 598 aa14.58□□□□□ -0.08
SNED1-205ENST00000405547 HADHQ16836 314 aaKnown RBP14.58□□□□□ -0.08
SNED1-205ENST00000405547 AOC3Q16853 763 aa14.58□□□□□ -0.08
SNED1-205ENST00000405547 HSPA6P17066 643 aa14.58□□□□□ -0.08
SNED1-205ENST00000405547 LIFRP42702 1097 aa14.58□□□□□ -0.08
SNED1-205ENST00000405547 GPKOWQ92917 476 aaPredicted RBP eCLIP14.58□□□□□ -0.08
SNED1-205ENST00000405547 THAP9Q9H5L6 903 aa14.58□□□□□ -0.08
SNED1-205ENST00000405547 ACTR5Q9H9F9 607 aaPredicted RBP14.58□□□□□ -0.08
SNED1-205ENST00000405547 STK17AQ9UEE5 414 aa14.58□□□□□ -0.08
SNED1-205ENST00000405547 ADD2P35612 726 aa14.58□□□□□ -0.08
SNED1-205ENST00000405547 EIF3BP55884 814 aaKnown RBP14.58□□□□□ -0.08
SNED1-205ENST00000405547 TTC19Q6DKK2 380 aaPredicted RBP14.58□□□□□ -0.08
SNED1-205ENST00000405547 PLA2G4DQ86XP0 818 aa14.58□□□□□ -0.08
SNED1-205ENST00000405547 EEF2KMTQ96G04 330 aa14.58□□□□□ -0.08
SNED1-205ENST00000405547 TLR7Q9NYK1 1049 aaKnown RBP14.58□□□□□ -0.08
SNED1-205ENST00000405547 LRRD1A4D1F6 860 aa14.58□□□□□ -0.08
SNED1-205ENST00000405547 HMGB1P1B2RPK0 211 aaPredicted RBP14.58□□□□□ -0.08
SNED1-205ENST00000405547 EIF3CLB5ME19 914 aaKnown RBP14.58□□□□□ -0.08
SNED1-205ENST00000405547 BCAMP50895 628 aa14.58□□□□□ -0.08
SNED1-205ENST00000405547 MFSD14BQ5SR56 506 aa14.58□□□□□ -0.08
SNED1-205ENST00000405547 SMYD4Q8IYR2 804 aaPredicted RBP14.58□□□□□ -0.08
SNED1-205ENST00000405547 EIF3CQ99613 913 aaKnown RBP14.58□□□□□ -0.08
SNED1-205ENST00000405547 MIS12Q9H081 205 aa14.58□□□□□ -0.08
SNED1-205ENST00000405547 NLRX1Q86UT6 975 aa14.57□□□□□ -0.08
SNED1-205ENST00000405547 VCX3AQ9NNX9 186 aa14.57□□□□□ -0.08
SNED1-205ENST00000405547 CEP152O94986 1710 aa14.57□□□□□ -0.08
SNED1-205ENST00000405547 SEPT2Q15019 361 aa14.57□□□□□ -0.08
SNED1-205ENST00000405547 FTOQ9C0B1 505 aaKnown RBP eCLIP14.57□□□□□ -0.08
SNED1-205ENST00000405547 NHEJ1Q9H9Q4 299 aaPredicted RBP14.57□□□□□ -0.08
SNED1-205ENST00000405547 PSMD6Q15008 389 aa14.57□□□□□ -0.08
SNED1-205ENST00000405547 SLC17A8Q8NDX2 589 aa14.57□□□□□ -0.08
SNED1-205ENST00000405547 SAMSN1Q9NSI8 373 aaKnown RBP14.57□□□□□ -0.08
SNED1-205ENST00000405547 ZFYVE16Q7Z3T8 1539 aa14.57□□□□□ -0.08
SNED1-205ENST00000405547 ADORA1P30542 326 aa14.57□□□□□ -0.08
SNED1-205ENST00000405547 HECW2Q9P2P5 1572 aa14.57□□□□□ -0.08
SNED1-205ENST00000405547 ZMYND10O75800 440 aa14.57□□□□□ -0.08
SNED1-205ENST00000405547 NR2F2P24468 414 aa14.57□□□□□ -0.08
SNED1-205ENST00000405547 CUL1Q13616 776 aa14.57□□□□□ -0.08
SNED1-205ENST00000405547 ADAT2Q7Z6V5 191 aaKnown RBP14.57□□□□□ -0.08
SNED1-205ENST00000405547 ANKRD13CQ8N6S4 541 aa14.57□□□□□ -0.08
SNED1-205ENST00000405547 MAP3K15Q6ZN16 1313 aa14.57□□□□□ -0.08
SNED1-205ENST00000405547 ATF7P17544 494 aaPredicted RBP14.57□□□□□ -0.08
SNED1-205ENST00000405547 ARHGAP42A6NI28 874 aa14.56□□□□□ -0.08
SNED1-205ENST00000405547 CTNND1O60716 968 aaKnown RBP14.56□□□□□ -0.08
SNED1-205ENST00000405547 BPIFB4P59827 614 aa14.56□□□□□ -0.08
SNED1-205ENST00000405547 C8orf37Q96NL8 207 aa14.56□□□□□ -0.08
SNED1-205ENST00000405547 FMO2Q99518 471 aa14.56□□□□□ -0.08
SNED1-205ENST00000405547 TRIM6Q9C030 488 aaPredicted RBP14.56□□□□□ -0.08
SNED1-205ENST00000405547 VPS41P49754 854 aa14.56□□□□□ -0.08
SNED1-205ENST00000405547 DMP1Q13316 513 aaPredicted RBP14.56□□□□□ -0.08
SNED1-205ENST00000405547 SH2B2O14492 632 aaPredicted RBP14.56□□□□□ -0.08
SNED1-205ENST00000405547 OPHN1O60890 802 aa14.56□□□□□ -0.08
SNED1-205ENST00000405547 SETSIPP0DME0 302 aa14.56□□□□□ -0.08
SNED1-205ENST00000405547 SLC12A2P55011 1212 aa14.56□□□□□ -0.08
SNED1-205ENST00000405547 RESP18Q5W5W9 173 aa14.56□□□□□ -0.08
SNED1-205ENST00000405547 ARL6IP4Q66PJ3 421 aaKnown RBP14.56□□□□□ -0.08
SNED1-205ENST00000405547 RNF34Q969K3 372 aa14.56□□□□□ -0.08
SNED1-205ENST00000405547 UGGT1Q9NYU2 1555 aa14.56□□□□□ -0.08
SNED1-205ENST00000405547 KIAA1024Q9UPX6 916 aa14.56□□□□□ -0.08
SNED1-205ENST00000405547 SERPING1P05155 500 aa14.56□□□□□ -0.08
SNED1-205ENST00000405547 GCFC2P16383 781 aaKnown RBP14.56□□□□□ -0.08
SNED1-205ENST00000405547 MAGEA9P43362 315 aa14.56□□□□□ -0.08
SNED1-205ENST00000405547 PHKA1P46020 1223 aa14.56□□□□□ -0.08
SNED1-205ENST00000405547 GOLGA8FQ08AF8 430 aa14.56□□□□□ -0.08
SNED1-205ENST00000405547 GOLGA8DPQ0D2H9 430 aa14.56□□□□□ -0.08
SNED1-205ENST00000405547 ARHGEF18Q6ZSZ5 1173 aa14.56□□□□□ -0.08
SNED1-205ENST00000405547 ACRBPQ8NEB7 543 aa14.56□□□□□ -0.08
SNED1-205ENST00000405547 HOOK2Q96ED9 719 aa14.56□□□□□ -0.08
SNED1-205ENST00000405547 FAM81BQ96LP2 452 aa14.56□□□□□ -0.08
SNED1-205ENST00000405547 UIMC1Q96RL1 719 aa14.56□□□□□ -0.08
SNED1-205ENST00000405547 PFDN4Q9NQP4 134 aa14.56□□□□□ -0.08
SNED1-205ENST00000405547 ADAM21Q9UKJ8 722 aa14.56□□□□□ -0.08
SNED1-205ENST00000405547 NR1D1P20393 614 aa14.56□□□□□ -0.08
SNED1-205ENST00000405547 POLR2BP30876 1174 aaKnown RBP14.56□□□□□ -0.08
SNED1-205ENST00000405547 ASPRV1Q53RT3 343 aa14.56□□□□□ -0.08
SNED1-205ENST00000405547 CCNL1Q9UK58 526 aaPredicted RBP14.56□□□□□ -0.08
SNED1-205ENST00000405547 TOM1O60784 492 aa14.56□□□□□ -0.08
SNED1-205ENST00000405547 GPATCH4Q5T3I0 446 aaKnown RBP14.56□□□□□ -0.08
SNED1-205ENST00000405547 DPP8Q6V1X1 898 aaPredicted RBP14.56□□□□□ -0.08
SNED1-205ENST00000405547 PPM1KQ8N3J5 372 aa14.56□□□□□ -0.08
SNED1-205ENST00000405547 OSBPL5Q9H0X9 879 aaPredicted RBP14.56□□□□□ -0.08
SNED1-205ENST00000405547 A0A087WWV3 80 aa14.55□□□□□ -0.08
SNED1-205ENST00000405547 PRPF6O94906 941 aaKnown RBP14.55□□□□□ -0.08
SNED1-205ENST00000405547 C2orf54Q08AI8 447 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms