RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 NUTM2BA6NNL0 878 aaPredicted RBP11.98□□□□□ -0.49
CLIP4-204ENST00000404424 NUTM2EB1AL46 878 aaPredicted RBP11.98□□□□□ -0.49
CLIP4-204ENST00000404424 hCG_1984214I3L0E3 225 aa11.98□□□□□ -0.49
CLIP4-204ENST00000404424 ENC1O14682 589 aa11.98□□□□□ -0.49
CLIP4-204ENST00000404424 HNRNPH3P31942 346 aaKnown RBP11.98□□□□□ -0.49
CLIP4-204ENST00000404424 STK4Q13043 487 aa11.98□□□□□ -0.49
CLIP4-204ENST00000404424 SOGA3Q5TF21 947 aa11.98□□□□□ -0.49
CLIP4-204ENST00000404424 ZNF713Q8N859 430 aaPredicted RBP11.98□□□□□ -0.49
CLIP4-204ENST00000404424 TGFBRAP1Q8WUH2 860 aa11.98□□□□□ -0.49
CLIP4-204ENST00000404424 RRP36Q96EU6 259 aaKnown RBP11.98□□□□□ -0.49
CLIP4-204ENST00000404424 JAG2Q9Y219 1238 aa11.98□□□□□ -0.49
CLIP4-204ENST00000404424 ABCB11O95342 1321 aa11.98□□□□□ -0.49
CLIP4-204ENST00000404424 MYH1P12882 1939 aa11.98□□□□□ -0.49
CLIP4-204ENST00000404424 ESYT2A0FGR8 921 aa11.98□□□□□ -0.49
CLIP4-204ENST00000404424 FGFR1OPO95684 399 aaKnown RBP11.98□□□□□ -0.49
CLIP4-204ENST00000404424 VAV2P52735 878 aa11.98□□□□□ -0.49
CLIP4-204ENST00000404424 GYS2P54840 703 aa11.98□□□□□ -0.49
CLIP4-204ENST00000404424 KIF5AQ12840 1032 aa11.98□□□□□ -0.49
CLIP4-204ENST00000404424 MIIPQ5JXC2 388 aa11.98□□□□□ -0.49
CLIP4-204ENST00000404424 CENPPQ6IPU0 288 aa11.98□□□□□ -0.49
CLIP4-204ENST00000404424 NEDD1Q8NHV4 660 aa11.98□□□□□ -0.49
CLIP4-204ENST00000404424 PCMTD1Q96MG8 357 aaPredicted RBP11.98□□□□□ -0.49
CLIP4-204ENST00000404424 MMS19Q96T76 1030 aa11.98□□□□□ -0.49
CLIP4-204ENST00000404424 TSPYL1Q9H0U9 437 aa11.98□□□□□ -0.49
CLIP4-204ENST00000404424 HDAC6Q9UBN7 1215 aa11.98□□□□□ -0.49
CLIP4-204ENST00000404424 SEC63Q9UGP8 760 aaKnown RBP11.98□□□□□ -0.49
CLIP4-204ENST00000404424 PVALEFA0A1B0GWK0 134 aa11.97□□□□□ -0.49
CLIP4-204ENST00000404424 USO1O60763 962 aaKnown RBP11.97□□□□□ -0.49
CLIP4-204ENST00000404424 AARSP49588 968 aaKnown RBP eCLIP11.97□□□□□ -0.49
CLIP4-204ENST00000404424 LEKR1Q6ZMV7 388 aa11.97□□□□□ -0.49
CLIP4-204ENST00000404424 C15orf52Q6ZUT6 534 aaKnown RBP11.97□□□□□ -0.49
CLIP4-204ENST00000404424 C16orf86Q6ZW13 317 aa11.97□□□□□ -0.49
CLIP4-204ENST00000404424 SV2BQ7L1I2 683 aa11.97□□□□□ -0.49
CLIP4-204ENST00000404424 ZNF804AQ7Z570 1209 aa11.97□□□□□ -0.49
CLIP4-204ENST00000404424 FNBP4Q8N3X1 1017 aaPredicted RBP11.97□□□□□ -0.49
CLIP4-204ENST00000404424 CCDC102AQ96A19 550 aa11.97□□□□□ -0.49
CLIP4-204ENST00000404424 ANKIB1Q9P2G1 1089 aa11.97□□□□□ -0.49
CLIP4-204ENST00000404424 STK17AQ9UEE5 414 aa11.97□□□□□ -0.49
CLIP4-204ENST00000404424 PLAGL2Q9UPG8 496 aa11.97□□□□□ -0.49
CLIP4-204ENST00000404424 LRRIQ3A6PVS8 624 aaPredicted RBP11.97□□□□□ -0.49
CLIP4-204ENST00000404424 RPS6KA5O75582 802 aa11.97□□□□□ -0.49
CLIP4-204ENST00000404424 TECP42680 631 aa11.97□□□□□ -0.49
CLIP4-204ENST00000404424 SPA17Q15506 151 aa11.97□□□□□ -0.49
CLIP4-204ENST00000404424 TRIM58Q8NG06 486 aa11.97□□□□□ -0.49
CLIP4-204ENST00000404424 SECISBP2LQ93073 1101 aaKnown RBP11.97□□□□□ -0.49
CLIP4-204ENST00000404424 CCDC42Q96M95 316 aa11.97□□□□□ -0.49
CLIP4-204ENST00000404424 EYA3Q99504 573 aa11.97□□□□□ -0.49
CLIP4-204ENST00000404424 LACRTQ9GZZ8 138 aa11.97□□□□□ -0.49
CLIP4-204ENST00000404424 FAN1Q9Y2M0 1017 aa11.97□□□□□ -0.49
CLIP4-204ENST00000404424 NAV1Q8NEY1 1877 aa11.97□□□□□ -0.49
CLIP4-204ENST00000404424 N4BP1O75113 896 aaKnown RBP11.96□□□□□ -0.49
CLIP4-204ENST00000404424 IVLP07476 585 aa11.96□□□□□ -0.49
CLIP4-204ENST00000404424 GOLGA8HP0CJ92 632 aa11.96□□□□□ -0.49
CLIP4-204ENST00000404424 FCER1AP12319 257 aa11.96□□□□□ -0.49
CLIP4-204ENST00000404424 CDK8P49336 464 aa11.96□□□□□ -0.49
CLIP4-204ENST00000404424 DIXDC1Q155Q3 683 aa11.96□□□□□ -0.49
CLIP4-204ENST00000404424 UNC13DQ70J99 1090 aa11.96□□□□□ -0.49
CLIP4-204ENST00000404424 SLC44A5Q8NCS7 719 aa11.96□□□□□ -0.49
CLIP4-204ENST00000404424 TBCKQ8TEA7 893 aa11.96□□□□□ -0.49
CLIP4-204ENST00000404424 RUBCNQ92622 972 aa11.96□□□□□ -0.49
CLIP4-204ENST00000404424 MMTAG2Q9BU76 263 aaKnown RBP11.96□□□□□ -0.49
CLIP4-204ENST00000404424 SRP68Q9UHB9 627 aaKnown RBP11.96□□□□□ -0.49
CLIP4-204ENST00000404424 MTMR7Q9Y216 660 aa11.96□□□□□ -0.49
CLIP4-204ENST00000404424 JRKLQ9Y4A0 524 aa11.96□□□□□ -0.49
CLIP4-204ENST00000404424 PRLRP16471 622 aa11.96□□□□□ -0.5
CLIP4-204ENST00000404424 PLCG2P16885 1265 aa11.96□□□□□ -0.5
CLIP4-204ENST00000404424 KLK7P49862 253 aa11.96□□□□□ -0.5
CLIP4-204ENST00000404424 FXR2P51116 673 aaKnown RBP eCLIP11.96□□□□□ -0.5
CLIP4-204ENST00000404424 ITIH3Q06033 890 aa11.96□□□□□ -0.5
CLIP4-204ENST00000404424 RAD51AP2Q09MP3 1159 aa11.96□□□□□ -0.5
CLIP4-204ENST00000404424 GRAPQ13588 217 aa11.96□□□□□ -0.5
CLIP4-204ENST00000404424 VWA3BQ502W6 1294 aa11.96□□□□□ -0.5
CLIP4-204ENST00000404424 CCDC70Q6NSX1 233 aa11.96□□□□□ -0.5
CLIP4-204ENST00000404424 FOXR2Q6PJQ5 311 aa11.96□□□□□ -0.5
CLIP4-204ENST00000404424 CCDC84Q86UT8 332 aaPredicted RBP11.96□□□□□ -0.5
CLIP4-204ENST00000404424 MAPKAPK5Q8IW41 473 aa11.96□□□□□ -0.5
CLIP4-204ENST00000404424 KIAA0895Q8NCT3 520 aa11.96□□□□□ -0.5
CLIP4-204ENST00000404424 GRAPLQ8TC17 118 aaPredicted RBP11.96□□□□□ -0.5
CLIP4-204ENST00000404424 RTFDC1Q9BY42 306 aaPredicted RBP11.96□□□□□ -0.5
CLIP4-204ENST00000404424 RAB34Q9BZG1 259 aa11.96□□□□□ -0.5
CLIP4-204ENST00000404424 LRRC27Q9C0I9 530 aa11.96□□□□□ -0.5
CLIP4-204ENST00000404424 RCCD1A6NED2 376 aa11.95□□□□□ -0.5
CLIP4-204ENST00000404424 SRGAP2O75044 1071 aa11.95□□□□□ -0.5
CLIP4-204ENST00000404424 TACC1O75410 805 aa11.95□□□□□ -0.5
CLIP4-204ENST00000404424 IDEP14735 1019 aa11.95□□□□□ -0.5
CLIP4-204ENST00000404424 CAPN2P17655 700 aa11.95□□□□□ -0.5
CLIP4-204ENST00000404424 NOVP48745 357 aa11.95□□□□□ -0.5
CLIP4-204ENST00000404424 TMEM266Q2M3C6 531 aa11.95□□□□□ -0.5
CLIP4-204ENST00000404424 REXO1Q8N1G1 1221 aaKnown RBP11.95□□□□□ -0.5
CLIP4-204ENST00000404424 GUF1Q8N442 669 aaKnown RBP11.95□□□□□ -0.5
CLIP4-204ENST00000404424 CAGE1Q8TC20 777 aa11.95□□□□□ -0.5
CLIP4-204ENST00000404424 SEMA6BQ9H3T3 888 aa11.95□□□□□ -0.5
CLIP4-204ENST00000404424 SNED1Q8TER0 1413 aa11.95□□□□□ -0.5
CLIP4-204ENST00000404424 GPR75-ASB3A0A0A6YYF3 556 aa11.95□□□□□ -0.5
CLIP4-204ENST00000404424 LCA5LO95447 670 aa11.95□□□□□ -0.5
CLIP4-204ENST00000404424 IRX5P78411 483 aaPredicted RBP11.95□□□□□ -0.5
CLIP4-204ENST00000404424 LRRC63Q05C16 580 aa11.95□□□□□ -0.5
CLIP4-204ENST00000404424 PDIA5Q14554 519 aa11.95□□□□□ -0.5
CLIP4-204ENST00000404424 MAN2A1Q16706 1144 aa11.95□□□□□ -0.5
CLIP4-204ENST00000404424 ZNF572Q7Z3I7 529 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 198.5 ms