RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 TXKP42681 527 aa13.32□□□□□ -0.28
SKA3-203ENST00000400018 ZSCAN23Q3MJ62 389 aa13.32□□□□□ -0.28
SKA3-203ENST00000400018 CATSPERGQ6ZRH7 1159 aa13.32□□□□□ -0.28
SKA3-203ENST00000400018 RNF214Q8ND24 703 aa13.32□□□□□ -0.28
SKA3-203ENST00000400018 ASCC2Q9H1I8 757 aaPredicted RBP13.32□□□□□ -0.28
SKA3-203ENST00000400018 SLC38A10Q9HBR0 1119 aa13.32□□□□□ -0.28
SKA3-203ENST00000400018 POLD4Q9HCU8 107 aa13.32□□□□□ -0.28
SKA3-203ENST00000400018 POLR3EQ9NVU0 708 aa13.32□□□□□ -0.28
SKA3-203ENST00000400018 TELO2Q9Y4R8 837 aa13.32□□□□□ -0.28
SKA3-203ENST00000400018 MYH7BA7E2Y1 1941 aa13.32□□□□□ -0.28
SKA3-203ENST00000400018 ZC3H4Q9UPT8 1303 aaKnown RBP13.32□□□□□ -0.28
SKA3-203ENST00000400018 EIF2AK2P19525 551 aaKnown RBP13.32□□□□□ -0.28
SKA3-203ENST00000400018 STAT3P40763 770 aa13.32□□□□□ -0.28
SKA3-203ENST00000400018 TECP42680 631 aa13.32□□□□□ -0.28
SKA3-203ENST00000400018 NASPP49321 788 aaPredicted RBP13.32□□□□□ -0.28
SKA3-203ENST00000400018 NONOQ15233 471 aaKnown RBP eCLIP13.32□□□□□ -0.28
SKA3-203ENST00000400018 NOL9Q5SY16 702 aaKnown RBP13.32□□□□□ -0.28
SKA3-203ENST00000400018 LDLRAD1Q5T700 205 aa13.32□□□□□ -0.28
SKA3-203ENST00000400018 TRERF1Q96PN7 1200 aa13.32□□□□□ -0.28
SKA3-203ENST00000400018 ANO3Q9BYT9 981 aa13.32□□□□□ -0.28
SKA3-203ENST00000400018 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.32□□□□□ -0.28
SKA3-203ENST00000400018 FBXO2Q9UK22 296 aaPredicted RBP13.32□□□□□ -0.28
SKA3-203ENST00000400018 POTEMA6NI47 508 aa13.31□□□□□ -0.28
SKA3-203ENST00000400018 FAM86B1E9PN63 330 aa13.31□□□□□ -0.28
SKA3-203ENST00000400018 FAM86B2P0C5J1 330 aa13.31□□□□□ -0.28
SKA3-203ENST00000400018 CNTN2Q02246 1040 aa13.31□□□□□ -0.28
SKA3-203ENST00000400018 KLHL40Q2TBA0 621 aa13.31□□□□□ -0.28
SKA3-203ENST00000400018 CHADLQ6NUI6 762 aa13.31□□□□□ -0.28
SKA3-203ENST00000400018 CLEC4DQ8WXI8 215 aa13.31□□□□□ -0.28
SKA3-203ENST00000400018 TAAR1Q96RJ0 339 aa13.31□□□□□ -0.28
SKA3-203ENST00000400018 ZNF214Q9UL59 606 aaPredicted RBP13.31□□□□□ -0.28
SKA3-203ENST00000400018 ABCB11O95342 1321 aa13.31□□□□□ -0.28
SKA3-203ENST00000400018 PTPRFP10586 1907 aa13.31□□□□□ -0.28
SKA3-203ENST00000400018 BIN1O00499 593 aa13.31□□□□□ -0.28
SKA3-203ENST00000400018 PGK2P07205 417 aa13.31□□□□□ -0.28
SKA3-203ENST00000400018 PFKFB1P16118 471 aa13.31□□□□□ -0.28
SKA3-203ENST00000400018 GNA11P29992 359 aa13.31□□□□□ -0.28
SKA3-203ENST00000400018 ZNF157P51786 506 aaPredicted RBP13.31□□□□□ -0.28
SKA3-203ENST00000400018 SNW1Q13573 536 aaKnown RBP13.31□□□□□ -0.28
SKA3-203ENST00000400018 DHX8Q14562 1220 aaKnown RBP13.31□□□□□ -0.28
SKA3-203ENST00000400018 COG2Q14746 738 aa13.31□□□□□ -0.28
SKA3-203ENST00000400018 PRR16Q569H4 304 aa13.31□□□□□ -0.28
SKA3-203ENST00000400018 RILPL1Q5EBL4 403 aa13.31□□□□□ -0.28
SKA3-203ENST00000400018 EEPD1Q7L9B9 569 aa13.31□□□□□ -0.28
SKA3-203ENST00000400018 C2orf69Q8N8R5 385 aa13.31□□□□□ -0.28
SKA3-203ENST00000400018 LRRC15Q8TF66 581 aa13.31□□□□□ -0.28
SKA3-203ENST00000400018 BRI3BPQ8WY22 251 aa13.31□□□□□ -0.28
SKA3-203ENST00000400018 LPAR1Q92633 364 aa13.31□□□□□ -0.28
SKA3-203ENST00000400018 ABT1Q9ULW3 272 aaKnown RBP13.31□□□□□ -0.28
SKA3-203ENST00000400018 DDX39AO00148 427 aaKnown RBP13.3□□□□□ -0.28
SKA3-203ENST00000400018 DSG3P32926 999 aa13.3□□□□□ -0.28
SKA3-203ENST00000400018 CLK2P49760 499 aaKnown RBP13.3□□□□□ -0.28
SKA3-203ENST00000400018 USP14P54578 494 aa13.3□□□□□ -0.28
SKA3-203ENST00000400018 RPS6P62753 249 aaKnown RBP13.3□□□□□ -0.28
SKA3-203ENST00000400018 BAATQ14032 418 aaPredicted RBP13.3□□□□□ -0.28
SKA3-203ENST00000400018 GPAT2Q6NUI2 795 aa13.3□□□□□ -0.28
SKA3-203ENST00000400018 NUDT12Q9BQG2 462 aa13.3□□□□□ -0.28
SKA3-203ENST00000400018 SH3GLB2Q9NR46 395 aa13.3□□□□□ -0.28
SKA3-203ENST00000400018 RLFQ13129 1914 aa13.3□□□□□ -0.28
SKA3-203ENST00000400018 CCL15-CCL14A0A0B4J2E2 113 aa13.3□□□□□ -0.28
SKA3-203ENST00000400018 A0A0G2JLL6 359 aaPredicted RBP13.3□□□□□ -0.28
SKA3-203ENST00000400018 BTBD19C9JJ37 291 aa13.3□□□□□ -0.28
SKA3-203ENST00000400018 IRX3P78415 501 aaPredicted RBP13.3□□□□□ -0.28
SKA3-203ENST00000400018 PPATQ06203 517 aa13.3□□□□□ -0.28
SKA3-203ENST00000400018 CCL15Q16663 113 aa13.3□□□□□ -0.28
SKA3-203ENST00000400018 PRRT2Q7Z6L0 340 aaPredicted RBP13.3□□□□□ -0.28
SKA3-203ENST00000400018 NCAPG2Q86XI2 1143 aa13.3□□□□□ -0.28
SKA3-203ENST00000400018 ANKRD13CQ8N6S4 541 aa13.3□□□□□ -0.28
SKA3-203ENST00000400018 C4orf32Q8N8J7 132 aa13.3□□□□□ -0.28
SKA3-203ENST00000400018 TMEM87AQ8NBN3 555 aa13.3□□□□□ -0.28
SKA3-203ENST00000400018 RNF146Q9NTX7 359 aa13.3□□□□□ -0.28
SKA3-203ENST00000400018 MYCLP12524 364 aaPredicted RBP13.29□□□□□ -0.28
SKA3-203ENST00000400018 CYP4F22Q6NT55 531 aa13.29□□□□□ -0.28
SKA3-203ENST00000400018 NEK8Q86SG6 692 aa13.29□□□□□ -0.28
SKA3-203ENST00000400018 SYMPKQ92797 1274 aaKnown RBP13.29□□□□□ -0.28
SKA3-203ENST00000400018 MS4A4AQ96JQ5 239 aa13.29□□□□□ -0.28
SKA3-203ENST00000400018 PORCNQ9H237 461 aa13.29□□□□□ -0.28
SKA3-203ENST00000400018 ICAM1P05362 532 aa13.29□□□□□ -0.28
SKA3-203ENST00000400018 PDIA4P13667 645 aaKnown RBP13.29□□□□□ -0.28
SKA3-203ENST00000400018 MRPL12P52815 198 aaKnown RBP13.29□□□□□ -0.28
SKA3-203ENST00000400018 KARSQ15046 597 aaKnown RBP13.29□□□□□ -0.28
SKA3-203ENST00000400018 LONRF3Q496Y0 759 aa13.29□□□□□ -0.28
SKA3-203ENST00000400018 REPS2Q8NFH8 660 aa13.29□□□□□ -0.28
SKA3-203ENST00000400018 EFCC1Q9HA90 598 aa13.29□□□□□ -0.28
SKA3-203ENST00000400018 POLR2DO15514 142 aaKnown RBP13.28□□□□□ -0.28
SKA3-203ENST00000400018 CHMP2AO43633 222 aa13.28□□□□□ -0.28
SKA3-203ENST00000400018 COBLO75128 1261 aa13.28□□□□□ -0.28
SKA3-203ENST00000400018 SMARCA1P28370 1054 aa13.28□□□□□ -0.28
SKA3-203ENST00000400018 HERVK_113P62684 666 aa13.28□□□□□ -0.28
SKA3-203ENST00000400018 SP4Q02446 784 aa13.28□□□□□ -0.28
SKA3-203ENST00000400018 PPP4R3BQ5MIZ7 849 aa13.28□□□□□ -0.28
SKA3-203ENST00000400018 FAM160B2Q86V87 743 aa13.28□□□□□ -0.28
SKA3-203ENST00000400018 DHX58Q96C10 678 aa13.28□□□□□ -0.28
SKA3-203ENST00000400018 SH2D3AQ9BRG2 576 aa13.28□□□□□ -0.28
SKA3-203ENST00000400018 SPDYE3A6NKU9 549 aa13.28□□□□□ -0.28
SKA3-203ENST00000400018 C19orf81C9J6K1 198 aa13.28□□□□□ -0.28
SKA3-203ENST00000400018 ZBED4O75132 1171 aa13.28□□□□□ -0.28
SKA3-203ENST00000400018 AFMP43652 599 aa13.28□□□□□ -0.28
SKA3-203ENST00000400018 NT5C2P49902 561 aa13.28□□□□□ -0.28
SKA3-203ENST00000400018 ARHGAP4P98171 946 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms