RNA–Protein interactions for RNA: ENST00000399273.5

CCDC144A-206, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC144A, Length 8,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-206ENST00000399273 KRT71Q3SY84 523 aa12.65□□□□□ -0.38
CCDC144A-206ENST00000399273 PNMA1Q8ND90 353 aa12.65□□□□□ -0.38
CCDC144A-206ENST00000399273 ZBTB9Q96C00 473 aa12.65□□□□□ -0.38
CCDC144A-206ENST00000399273 THRAP3Q9Y2W1 955 aaKnown RBP12.65□□□□□ -0.38
CCDC144A-206ENST00000399273 SHANK2Q9UPX8 1470 aa12.65□□□□□ -0.38
CCDC144A-206ENST00000399273 KLRF2D3W0D1 207 aa12.65□□□□□ -0.38
CCDC144A-206ENST00000399273 NVLO15381 856 aaKnown RBP12.65□□□□□ -0.38
CCDC144A-206ENST00000399273 ATF2P15336 505 aa12.65□□□□□ -0.38
CCDC144A-206ENST00000399273 GPATCH4Q5T3I0 446 aaKnown RBP12.65□□□□□ -0.38
CCDC144A-206ENST00000399273 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.65□□□□□ -0.38
CCDC144A-206ENST00000399273 KCNJ14Q9UNX9 436 aa12.65□□□□□ -0.38
CCDC144A-206ENST00000399273 DDAH1O94760 285 aa12.65□□□□□ -0.38
CCDC144A-206ENST00000399273 BFSP1Q12934 665 aa12.65□□□□□ -0.38
CCDC144A-206ENST00000399273 ZNF577Q9BSK1 485 aa12.65□□□□□ -0.38
CCDC144A-206ENST00000399273 FOSP01100 380 aaPredicted RBP12.65□□□□□ -0.38
CCDC144A-206ENST00000399273 MYL7Q01449 175 aa12.65□□□□□ -0.38
CCDC144A-206ENST00000399273 DCLK2Q8N568 766 aa12.65□□□□□ -0.38
CCDC144A-206ENST00000399273 BLZF1Q9H2G9 400 aa12.65□□□□□ -0.38
CCDC144A-206ENST00000399273 KCNJ18B7U540 433 aa12.65□□□□□ -0.38
CCDC144A-206ENST00000399273 SGK1O00141 431 aa12.65□□□□□ -0.38
CCDC144A-206ENST00000399273 KCNJ12Q14500 433 aa12.65□□□□□ -0.38
CCDC144A-206ENST00000399273 FAM227BQ96M60 508 aa12.65□□□□□ -0.38
CCDC144A-206ENST00000399273 ATXN8OSP0DMR3 200 aa12.65□□□□□ -0.38
CCDC144A-206ENST00000399273 ERO1AQ96HE7 468 aa12.65□□□□□ -0.38
CCDC144A-206ENST00000399273 NLRC4Q9NPP4 1024 aa12.65□□□□□ -0.38
CCDC144A-206ENST00000399273 FAN1Q9Y2M0 1017 aa12.65□□□□□ -0.38
CCDC144A-206ENST00000399273 hCG_1642624A0A1W2PR95 340 aa12.65□□□□□ -0.39
CCDC144A-206ENST00000399273 INO80B-WBP1J3KQ70 363 aa12.65□□□□□ -0.39
CCDC144A-206ENST00000399273 CCDC38Q502W7 563 aa12.65□□□□□ -0.39
CCDC144A-206ENST00000399273 INO80BQ9C086 356 aaPredicted RBP12.65□□□□□ -0.39
CCDC144A-206ENST00000399273 DDX41Q9UJV9 622 aaKnown RBP12.65□□□□□ -0.39
CCDC144A-206ENST00000399273 NFE2L3Q9Y4A8 694 aa12.65□□□□□ -0.39
CCDC144A-206ENST00000399273 USP17L12C9JPN9 530 aa12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 USP17L21D6R901 530 aa12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 GNAT1P11488 350 aa12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 MORC3Q14149 939 aa12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 ZNF804BA4D1E1 1349 aa12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 ZMYM4Q5VZL5 1548 aa12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 TMEM232C9JQI7 657 aa12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 E7EWF7 191 aa12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 KPNA2P52292 529 aaKnown RBP12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 DNAJC10Q8IXB1 793 aa12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 MAGEF1Q9HAY2 307 aa12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 BZW2Q9Y6E2 419 aaKnown RBP12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 ZMYM6O95789 1325 aa12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 ASPHQ12797 758 aa12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 PDE1CQ14123 709 aaPredicted RBP12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 DALRD3Q5D0E6 543 aaKnown RBP12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 PI4K2BQ8TCG2 481 aa12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 CCDC17Q96LX7 622 aa12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 HOMER3Q9NSC5 361 aa12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 ITM2BQ9Y287 266 aa12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 KCNK3O14649 394 aa12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 SLC4A1P02730 911 aa12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 FASTKD5Q7L8L6 764 aaKnown RBP12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 ZHX1Q9UKY1 873 aaPredicted RBP12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 INHBAP08476 426 aa12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 CCDC51Q96ER9 411 aa12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 NEURL1BA8MQ27 555 aa12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 MCF2LO15068 1137 aa12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 PMLP29590 882 aa12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 SLFN13Q68D06 897 aa12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 TSPYL6Q8N831 410 aa12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 CCDC127Q96BQ5 260 aa12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 ZBTB40Q9NUA8 1239 aa12.64□□□□□ -0.39
CCDC144A-206ENST00000399273 INPP5BP32019 993 aa12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 LEMD3Q9Y2U8 911 aa12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 MFAP3P55082 362 aa12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 N4BP2L2Q92802 583 aaPredicted RBP12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 AMNQ9BXJ7 453 aa12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 LRRC4Q9HBW1 653 aa12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 KLHL14Q9P2G3 628 aa12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 LAD1O00515 517 aa12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 KRT40Q6A162 431 aa12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 PASKQ96RG2 1323 aa12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 CTNNA1P35221 906 aaKnown RBP12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 PHEXP78562 749 aa12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 ARL13BQ3SXY8 428 aa12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 MYLK4Q86YV6 388 aaPredicted RBP12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 KLHDC4Q8TBB5 520 aa12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 SPDL1Q96EA4 605 aa12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 ABCC2Q92887 1545 aa12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 TMEM247A6NEH6 219 aa12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 PGBD1Q96JS3 809 aa12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 SAR1BQ9Y6B6 198 aa12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 PDCD2Q16342 344 aaPredicted RBP12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 CDC42BPGQ6DT37 1551 aa12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 BICRAQ9NZM4 1560 aa12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 PYGLP06737 847 aa12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 KRT24Q2M2I5 525 aa12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 MUM1Q2TAK8 710 aa12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 KRBA2Q6ZNG9 492 aa12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 PHACTR3Q96KR7 559 aa12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 MMTAG2Q9BU76 263 aaKnown RBP12.63□□□□□ -0.39
CCDC144A-206ENST00000399273 MYO10Q9HD67 2058 aa12.62□□□□□ -0.39
CCDC144A-206ENST00000399273 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.62□□□□□ -0.39
CCDC144A-206ENST00000399273 RFX6Q8HWS3 928 aa12.62□□□□□ -0.39
CCDC144A-206ENST00000399273 WHAMMQ8TF30 809 aa12.62□□□□□ -0.39
CCDC144A-206ENST00000399273 SUCLG2Q96I99 432 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms