RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 TSR1Q2NL82 804 aaKnown RBP12.74□□□□□ -0.37
C4orf3-201ENST00000399075 FIGNQ5HY92 759 aa12.74□□□□□ -0.37
C4orf3-201ENST00000399075 SLC51AQ86UW1 340 aa12.74□□□□□ -0.37
C4orf3-201ENST00000399075 REXO1Q8N1G1 1221 aaKnown RBP12.74□□□□□ -0.37
C4orf3-201ENST00000399075 MSL3Q8N5Y2 521 aaKnown RBP12.74□□□□□ -0.37
C4orf3-201ENST00000399075 CSGALNACT2Q8N6G5 542 aa12.74□□□□□ -0.37
C4orf3-201ENST00000399075 CEP95Q96GE4 821 aa12.74□□□□□ -0.37
C4orf3-201ENST00000399075 SLF1Q9BQI6 1058 aa12.74□□□□□ -0.37
C4orf3-201ENST00000399075 EPC1Q9H2F5 836 aa12.74□□□□□ -0.37
C4orf3-201ENST00000399075 ST7Q9NRC1 585 aa12.74□□□□□ -0.37
C4orf3-201ENST00000399075 REXO2Q9Y3B8 237 aaKnown RBP12.74□□□□□ -0.37
C4orf3-201ENST00000399075 SASH3O75995 380 aa12.73□□□□□ -0.37
C4orf3-201ENST00000399075 RBM17Q96I25 401 aaKnown RBP12.73□□□□□ -0.37
C4orf3-201ENST00000399075 TUBGCP2Q9BSJ2 902 aa12.73□□□□□ -0.37
C4orf3-201ENST00000399075 FUT8Q9BYC5 575 aa12.73□□□□□ -0.37
C4orf3-201ENST00000399075 ANKZF1Q9H8Y5 726 aa12.73□□□□□ -0.37
C4orf3-201ENST00000399075 UBR3Q6ZT12 1888 aa12.73□□□□□ -0.37
C4orf3-201ENST00000399075 PSMD14O00487 310 aa12.73□□□□□ -0.37
C4orf3-201ENST00000399075 PDE4DQ08499 809 aa12.73□□□□□ -0.37
C4orf3-201ENST00000399075 CNNM4Q6P4Q7 775 aa12.73□□□□□ -0.37
C4orf3-201ENST00000399075 USP17L2Q6R6M4 530 aa12.73□□□□□ -0.37
C4orf3-201ENST00000399075 ZSCAN29Q8IWY8 852 aaPredicted RBP12.73□□□□□ -0.37
C4orf3-201ENST00000399075 GPR101Q96P66 508 aaPredicted RBP12.73□□□□□ -0.37
C4orf3-201ENST00000399075 CHP1Q99653 195 aa12.73□□□□□ -0.37
C4orf3-201ENST00000399075 MMTAG2Q9BU76 263 aaKnown RBP12.73□□□□□ -0.37
C4orf3-201ENST00000399075 STK17AQ9UEE5 414 aa12.73□□□□□ -0.37
C4orf3-201ENST00000399075 BBOX1O75936 387 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 FXR2P51116 673 aaKnown RBP eCLIP12.72□□□□□ -0.372e-6■□□□□ 9.9
C4orf3-201ENST00000399075 ASIC1P78348 528 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 KRT83P78385 493 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 ASPRV1Q53RT3 343 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 WDR59Q6PJI9 974 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 FAM196AQ6ZSG2 479 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 EHBP1Q8NDI1 1231 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 TBCKQ8TEA7 893 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 CALML4Q96GE6 196 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 MTMR9Q96QG7 549 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 MTMR7Q9Y216 660 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 QSER1Q2KHR3 1735 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 A0A1W2PQJ5 194 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 ST5P78524 1137 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 CDK17Q00537 523 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 LONRF2Q1L5Z9 754 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 MFSD14BQ5SR56 506 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 PPP1R18Q6NYC8 613 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 CCDC170Q8IYT3 715 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 ERGIC2Q96RQ1 377 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 PIGSQ96S52 555 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 PLIN2Q99541 437 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 ABCB11O95342 1321 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 CTAGE15A4D2H0 777 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 MAP2K7O14733 419 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 CTAGE8P0CG41 777 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 SNHG28P0DPA3 235 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 PDHBP11177 359 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 HOXA10P31260 410 aaPredicted RBP12.72□□□□□ -0.37
C4orf3-201ENST00000399075 ZBED6P86452 979 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 CTAGE6Q86UF2 777 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 CTAGE4Q8IX94 777 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 CNOT6LQ96LI5 555 aaKnown RBP12.72□□□□□ -0.37
C4orf3-201ENST00000399075 CPVLQ9H3G5 476 aa12.72□□□□□ -0.37
C4orf3-201ENST00000399075 PUF60Q9UHX1 559 aaKnown RBP12.72□□□□□ -0.37
C4orf3-201ENST00000399075 MYO3BQ8WXR4 1341 aa12.71□□□□□ -0.37
C4orf3-201ENST00000399075 PVALEFA0A1B0GWK0 134 aa12.71□□□□□ -0.37
C4orf3-201ENST00000399075 B4DLN1 442 aa12.71□□□□□ -0.37
C4orf3-201ENST00000399075 ERLIN1O75477 346 aa12.71□□□□□ -0.37
C4orf3-201ENST00000399075 ABL1P00519 1130 aa12.71□□□□□ -0.37
C4orf3-201ENST00000399075 CYLC1P35663 651 aaPredicted RBP12.71□□□□□ -0.37
C4orf3-201ENST00000399075 STK4Q13043 487 aa12.71□□□□□ -0.37
C4orf3-201ENST00000399075 ANKRD40Q6AI12 368 aa12.71□□□□□ -0.37
C4orf3-201ENST00000399075 FOXR2Q6PJQ5 311 aa12.71□□□□□ -0.37
C4orf3-201ENST00000399075 MYO6Q9UM54 1294 aa12.71□□□□□ -0.37
C4orf3-201ENST00000399075 SUGT1Q9Y2Z0 365 aa12.71□□□□□ -0.37
C4orf3-201ENST00000399075 IGKV6D-41A0A0C4DH26 115 aa12.71□□□□□ -0.38
C4orf3-201ENST00000399075 USP17L5A8MUK1 530 aa12.71□□□□□ -0.38
C4orf3-201ENST00000399075 TECP42680 631 aa12.71□□□□□ -0.38
C4orf3-201ENST00000399075 GABPAQ06546 454 aa12.71□□□□□ -0.38
C4orf3-201ENST00000399075 TMC4Q7Z404 712 aa12.71□□□□□ -0.38
C4orf3-201ENST00000399075 ZNHIT6Q9NWK9 470 aaKnown RBP12.71□□□□□ -0.38
C4orf3-201ENST00000399075 MTMR4Q9NYA4 1195 aa12.71□□□□□ -0.38
C4orf3-201ENST00000399075 HERVK_113P62684 666 aa12.7□□□□□ -0.38
C4orf3-201ENST00000399075 TBC1D8BQ0IIM8 1120 aa12.7□□□□□ -0.38
C4orf3-201ENST00000399075 PDIA5Q14554 519 aa12.7□□□□□ -0.38
C4orf3-201ENST00000399075 SMC1AQ14683 1233 aaKnown RBP12.7□□□□□ -0.38
C4orf3-201ENST00000399075 MIIPQ5JXC2 388 aa12.7□□□□□ -0.38
C4orf3-201ENST00000399075 CENPPQ6IPU0 288 aa12.7□□□□□ -0.38
C4orf3-201ENST00000399075 SV2BQ7L1I2 683 aa12.7□□□□□ -0.38
C4orf3-201ENST00000399075 TRAPPC11Q7Z392 1133 aa12.7□□□□□ -0.38
C4orf3-201ENST00000399075 POTEDQ86YR6 584 aa12.7□□□□□ -0.38
C4orf3-201ENST00000399075 TBC1D16Q8TBP0 767 aa12.7□□□□□ -0.38
C4orf3-201ENST00000399075 CRAMP1Q96RY5 1269 aa12.7□□□□□ -0.38
C4orf3-201ENST00000399075 RASSF10A6NK89 507 aa12.7□□□□□ -0.38
C4orf3-201ENST00000399075 EIF3CLB5ME19 914 aaKnown RBP12.7□□□□□ -0.38
C4orf3-201ENST00000399075 PES1O00541 588 aaKnown RBP12.7□□□□□ -0.38
C4orf3-201ENST00000399075 TRIM21P19474 475 aaKnown RBP12.7□□□□□ -0.38
C4orf3-201ENST00000399075 CYP2C19P33261 490 aa12.7□□□□□ -0.38
C4orf3-201ENST00000399075 ADCY7P51828 1080 aa12.7□□□□□ -0.38
C4orf3-201ENST00000399075 GRB10Q13322 594 aa12.7□□□□□ -0.38
C4orf3-201ENST00000399075 CALCRLQ16602 461 aa12.7□□□□□ -0.38
C4orf3-201ENST00000399075 TMEM266Q2M3C6 531 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms