RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 WDR93Q6P2C0 686 aa28.6■■■□□ 2.17
COL13A1-203ENST00000398969 KRT25Q7Z3Z0 450 aa28.6■■■□□ 2.17
COL13A1-203ENST00000398969 NUP58Q9BVL2 599 aa28.6■■■□□ 2.17
COL13A1-203ENST00000398969 BICDL2A1A5D9 508 aa28.59■■■□□ 2.17
COL13A1-203ENST00000398969 ATP1A1P05023 1023 aaKnown RBP28.59■■■□□ 2.17
COL13A1-203ENST00000398969 TRIM21P19474 475 aaKnown RBP28.59■■■□□ 2.17
COL13A1-203ENST00000398969 PPP4CP60510 307 aa28.59■■■□□ 2.17
COL13A1-203ENST00000398969 GSTO1P78417 241 aa28.59■■■□□ 2.17
COL13A1-203ENST00000398969 ANKRD40Q6AI12 368 aa28.59■■■□□ 2.17
COL13A1-203ENST00000398969 RETREG2Q8NC44 543 aa28.59■■■□□ 2.17
COL13A1-203ENST00000398969 CCDC47Q96A33 483 aaKnown RBP28.59■■■□□ 2.17
COL13A1-203ENST00000398969 SPZ1Q9BXG8 430 aa28.59■■■□□ 2.17
COL13A1-203ENST00000398969 CPVLQ9H3G5 476 aa28.59■■■□□ 2.17
COL13A1-203ENST00000398969 CCNT1O60563 726 aaKnown RBP28.59■■■□□ 2.17
COL13A1-203ENST00000398969 APBA3O96018 575 aa28.59■■■□□ 2.17
COL13A1-203ENST00000398969 NAPAP54920 295 aa28.59■■■□□ 2.17
COL13A1-203ENST00000398969 STK4Q13043 487 aa28.59■■■□□ 2.17
COL13A1-203ENST00000398969 CASP8Q14790 479 aa28.59■■■□□ 2.17
COL13A1-203ENST00000398969 LETM2Q2VYF4 491 aa28.59■■■□□ 2.17
COL13A1-203ENST00000398969 EEF2KMTQ96G04 330 aa28.59■■■□□ 2.17
COL13A1-203ENST00000398969 CNOT6LQ96LI5 555 aaKnown RBP28.59■■■□□ 2.17
COL13A1-203ENST00000398969 C7orf25Q9BPX7 421 aa28.59■■■□□ 2.17
COL13A1-203ENST00000398969 KLK7P49862 253 aa28.58■■■□□ 2.17
COL13A1-203ENST00000398969 TBC1D8BQ0IIM8 1120 aa28.58■■■□□ 2.17
COL13A1-203ENST00000398969 NONOQ15233 471 aaKnown RBP eCLIP28.58■■■□□ 2.17
COL13A1-203ENST00000398969 PAPD7Q5XG87 772 aaKnown RBP28.58■■■□□ 2.17
COL13A1-203ENST00000398969 KIAA1328Q86T90 577 aa28.58■■■□□ 2.17
COL13A1-203ENST00000398969 RBM17Q96I25 401 aaKnown RBP28.58■■■□□ 2.17
COL13A1-203ENST00000398969 CYLC1P35663 651 aaPredicted RBP28.58■■■□□ 2.17
COL13A1-203ENST00000398969 ASIC1P78348 528 aa28.58■■■□□ 2.17
COL13A1-203ENST00000398969 JAKMIP2Q96AA8 810 aa28.58■■■□□ 2.17
COL13A1-203ENST00000398969 SAP30BPQ9UHR5 308 aaKnown RBP28.58■■■□□ 2.17
COL13A1-203ENST00000398969 SAR1BQ9Y6B6 198 aa28.58■■■□□ 2.17
COL13A1-203ENST00000398969 ZBED6P86452 979 aa28.57■■■□□ 2.16
COL13A1-203ENST00000398969 MAPKAPK5Q8IW41 473 aa28.57■■■□□ 2.16
COL13A1-203ENST00000398969 FAM114A1Q8IWE2 563 aa28.57■■■□□ 2.16
COL13A1-203ENST00000398969 EHBP1Q8NDI1 1231 aa28.57■■■□□ 2.16
COL13A1-203ENST00000398969 ZNHIT6Q9NWK9 470 aaKnown RBP28.57■■■□□ 2.16
COL13A1-203ENST00000398969 KRT86O43790 486 aa28.57■■■□□ 2.16
COL13A1-203ENST00000398969 AKT1S1Q96B36 256 aa28.57■■■□□ 2.16
COL13A1-203ENST00000398969 NHEJ1Q9H9Q4 299 aaPredicted RBP28.57■■■□□ 2.16
COL13A1-203ENST00000398969 VPS18Q9P253 973 aa28.57■■■□□ 2.16
COL13A1-203ENST00000398969 N4BP1O75113 896 aaKnown RBP28.56■■■□□ 2.16
COL13A1-203ENST00000398969 FCER1AP12319 257 aa28.56■■■□□ 2.16
COL13A1-203ENST00000398969 MIIPQ5JXC2 388 aa28.56■■■□□ 2.16
COL13A1-203ENST00000398969 MMS19Q96T76 1030 aa28.56■■■□□ 2.16
COL13A1-203ENST00000398969 RCCD1A6NED2 376 aa28.55■■■□□ 2.16
COL13A1-203ENST00000398969 SMCO2A6NFE2 343 aa28.55■■■□□ 2.16
COL13A1-203ENST00000398969 EIF3CLB5ME19 914 aaKnown RBP28.55■■■□□ 2.16
COL13A1-203ENST00000398969 USP14P54578 494 aa28.55■■■□□ 2.16
COL13A1-203ENST00000398969 MUM1L1Q5H9M0 696 aa28.55■■■□□ 2.16
COL13A1-203ENST00000398969 NEK8Q86SG6 692 aa28.55■■■□□ 2.16
COL13A1-203ENST00000398969 CCDC170Q8IYT3 715 aa28.55■■■□□ 2.16
COL13A1-203ENST00000398969 EIF3CQ99613 913 aaKnown RBP28.55■■■□□ 2.16
COL13A1-203ENST00000398969 LACRTQ9GZZ8 138 aa28.55■■■□□ 2.16
COL13A1-203ENST00000398969 C6orf50Q9HD87 102 aa28.55■■■□□ 2.16
COL13A1-203ENST00000398969 SNED1Q8TER0 1413 aa28.55■■■□□ 2.16
COL13A1-203ENST00000398969 PPP1R2P41236 205 aa28.55■■■□□ 2.16
COL13A1-203ENST00000398969 MTIF2P46199 727 aaKnown RBP28.55■■■□□ 2.16
COL13A1-203ENST00000398969 ZSCAN29Q8IWY8 852 aaPredicted RBP28.55■■■□□ 2.16
COL13A1-203ENST00000398969 KLRG2A4D1S0 409 aaPredicted RBP28.54■■■□□ 2.16
COL13A1-203ENST00000398969 SRGAP2O75044 1071 aa28.54■■■□□ 2.16
COL13A1-203ENST00000398969 HOXA10P31260 410 aaPredicted RBP28.54■■■□□ 2.16
COL13A1-203ENST00000398969 LMAN1P49257 510 aa28.54■■■□□ 2.16
COL13A1-203ENST00000398969 GPSM2P81274 684 aa28.54■■■□□ 2.16
COL13A1-203ENST00000398969 MMTAG2Q9BU76 263 aaKnown RBP28.54■■■□□ 2.16
COL13A1-203ENST00000398969 NOC4LQ9BVI4 516 aaKnown RBP28.54■■■□□ 2.16
COL13A1-203ENST00000398969 RXRBP28702 533 aa28.54■■■□□ 2.16
COL13A1-203ENST00000398969 GNA11P29992 359 aa28.54■■■□□ 2.16
COL13A1-203ENST00000398969 TECP42680 631 aa28.54■■■□□ 2.16
COL13A1-203ENST00000398969 ERGIC2Q96RQ1 377 aa28.54■■■□□ 2.16
COL13A1-203ENST00000398969 ZNF287Q9HBT7 754 aa28.54■■■□□ 2.16
COL13A1-203ENST00000398969 BBOX1O75936 387 aa28.53■■■□□ 2.16
COL13A1-203ENST00000398969 LDHCP07864 332 aa28.53■■■□□ 2.16
COL13A1-203ENST00000398969 AMPD3Q01432 767 aa28.53■■■□□ 2.16
COL13A1-203ENST00000398969 FIGNQ5HY92 759 aa28.53■■■□□ 2.16
COL13A1-203ENST00000398969 C15orf52Q6ZUT6 534 aaKnown RBP28.53■■■□□ 2.16
COL13A1-203ENST00000398969 COL23A1Q86Y22 540 aaPredicted RBP28.53■■■□□ 2.16
COL13A1-203ENST00000398969 PCMTD1Q96MG8 357 aaPredicted RBP28.53■■■□□ 2.16
COL13A1-203ENST00000398969 EYA3Q99504 573 aa28.53■■■□□ 2.16
COL13A1-203ENST00000398969 RTFDC1Q9BY42 306 aaPredicted RBP28.53■■■□□ 2.16
COL13A1-203ENST00000398969 A0A1W2PQJ5 194 aa28.53■■■□□ 2.16
COL13A1-203ENST00000398969 LRRIQ3A6PVS8 624 aaPredicted RBP28.53■■■□□ 2.16
COL13A1-203ENST00000398969 IPO7O95373 1038 aaKnown RBP28.53■■■□□ 2.16
COL13A1-203ENST00000398969 COBLL1Q53SF7 1204 aa28.53■■■□□ 2.16
COL13A1-203ENST00000398969 KIAA0895Q8NCT3 520 aa28.53■■■□□ 2.16
COL13A1-203ENST00000398969 ZBTB9Q96C00 473 aa28.53■■■□□ 2.16
COL13A1-203ENST00000398969 RRP36Q96EU6 259 aaKnown RBP28.53■■■□□ 2.16
COL13A1-203ENST00000398969 CDK8P49336 464 aa28.52■■■□□ 2.16
COL13A1-203ENST00000398969 CDK17Q00537 523 aa28.52■■■□□ 2.16
COL13A1-203ENST00000398969 CNNM4Q6P4Q7 775 aa28.52■■■□□ 2.16
COL13A1-203ENST00000398969 USP17L2Q6R6M4 530 aa28.52■■■□□ 2.16
COL13A1-203ENST00000398969 NKRFO15226 690 aaKnown RBP eCLIP28.52■■■□□ 2.16
COL13A1-203ENST00000398969 C16orf86Q6ZW13 317 aa28.52■■■□□ 2.16
COL13A1-203ENST00000398969 NLGN1Q8N2Q7 840 aa28.52■■■□□ 2.16
COL13A1-203ENST00000398969 TBCKQ8TEA7 893 aa28.52■■■□□ 2.16
COL13A1-203ENST00000398969 PURBQ96QR8 312 aaKnown RBP28.52■■■□□ 2.16
COL13A1-203ENST00000398969 RNF216Q9NWF9 866 aaPredicted RBP28.52■■■□□ 2.16
COL13A1-203ENST00000398969 FAN1Q9Y2M0 1017 aa28.52■■■□□ 2.16
COL13A1-203ENST00000398969 CKAP4Q07065 602 aaKnown RBP28.51■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms