RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 PCP11498 1178 aaKnown RBP13.08□□□□□ -0.32
SRMP1-201ENST00000398959 CALML3P27482 149 aa13.08□□□□□ -0.32
SRMP1-201ENST00000398959 GRIN2CQ14957 1233 aa13.08□□□□□ -0.32
SRMP1-201ENST00000398959 AKNAD1Q5T1N1 836 aa13.08□□□□□ -0.32
SRMP1-201ENST00000398959 B4GALNT3Q6L9W6 998 aa13.08□□□□□ -0.32
SRMP1-201ENST00000398959 ZNF365Q70YC5 407 aa13.08□□□□□ -0.32
SRMP1-201ENST00000398959 C16orf59Q7L2K0 433 aa13.08□□□□□ -0.32
SRMP1-201ENST00000398959 SLC43A3Q8NBI5 491 aa13.08□□□□□ -0.32
SRMP1-201ENST00000398959 MORC4Q8TE76 937 aa13.08□□□□□ -0.32
SRMP1-201ENST00000398959 TTC14Q96N46 770 aa13.08□□□□□ -0.32
SRMP1-201ENST00000398959 MPHOSPH6Q99547 160 aaKnown RBP13.08□□□□□ -0.32
SRMP1-201ENST00000398959 HIPK3Q9H422 1215 aa13.08□□□□□ -0.32
SRMP1-201ENST00000398959 ZNF576Q9H609 170 aa13.08□□□□□ -0.32
SRMP1-201ENST00000398959 IL23AQ9NPF7 189 aa13.08□□□□□ -0.32
SRMP1-201ENST00000398959 PNMA2Q9UL42 364 aa13.08□□□□□ -0.32
SRMP1-201ENST00000398959 LOC102724159A0A0B4J2E5 919 aa13.07□□□□□ -0.32
SRMP1-201ENST00000398959 B4GALT4O60513 344 aa13.07□□□□□ -0.32
SRMP1-201ENST00000398959 PSMC6P62333 389 aa13.07□□□□□ -0.32
SRMP1-201ENST00000398959 PWP2Q15269 919 aaKnown RBP13.07□□□□□ -0.32
SRMP1-201ENST00000398959 DUSP28Q4G0W2 176 aa13.07□□□□□ -0.32
SRMP1-201ENST00000398959 TMEM63BQ5T3F8 832 aa13.07□□□□□ -0.32
SRMP1-201ENST00000398959 RNF207Q6ZRF8 634 aa13.07□□□□□ -0.32
SRMP1-201ENST00000398959 PBX4Q9BYU1 374 aa13.07□□□□□ -0.32
SRMP1-201ENST00000398959 WDR11Q9BZH6 1224 aa13.07□□□□□ -0.32
SRMP1-201ENST00000398959 MTIF3Q9H2K0 278 aaKnown RBP13.07□□□□□ -0.32
SRMP1-201ENST00000398959 RWDD1Q9H446 243 aaPredicted RBP13.07□□□□□ -0.32
SRMP1-201ENST00000398959 RNF41Q9H4P4 317 aaPredicted RBP13.07□□□□□ -0.32
SRMP1-201ENST00000398959 GRXCR1A8MXD5 290 aa13.06□□□□□ -0.32
SRMP1-201ENST00000398959 ZNF213O14771 459 aa13.06□□□□□ -0.32
SRMP1-201ENST00000398959 FGBP02675 491 aa13.06□□□□□ -0.32
SRMP1-201ENST00000398959 SDSP20132 328 aa13.06□□□□□ -0.32
SRMP1-201ENST00000398959 PBX2P40425 430 aa13.06□□□□□ -0.32
SRMP1-201ENST00000398959 CPT1AP50416 773 aa13.06□□□□□ -0.32
SRMP1-201ENST00000398959 CCL23P55773 120 aa13.06□□□□□ -0.32
SRMP1-201ENST00000398959 PDE4DQ08499 809 aa13.06□□□□□ -0.32
SRMP1-201ENST00000398959 ZNF543Q08ER8 600 aa13.06□□□□□ -0.32
SRMP1-201ENST00000398959 AAMPQ13685 434 aa13.06□□□□□ -0.32
SRMP1-201ENST00000398959 RASIP1Q5U651 963 aa13.06□□□□□ -0.32
SRMP1-201ENST00000398959 SLC30A10Q6XR72 485 aa13.06□□□□□ -0.32
SRMP1-201ENST00000398959 TBC1D10CQ8IV04 446 aa13.06□□□□□ -0.32
SRMP1-201ENST00000398959 OR6J1Q8NGC5 347 aa13.06□□□□□ -0.32
SRMP1-201ENST00000398959 ESR2Q92731 530 aa13.06□□□□□ -0.32
SRMP1-201ENST00000398959 GAS2L1Q99501 681 aaPredicted RBP13.06□□□□□ -0.32
SRMP1-201ENST00000398959 ZKSCAN3Q9BRR0 538 aa13.06□□□□□ -0.32
SRMP1-201ENST00000398959 TRPV6Q9H1D0 765 aa13.06□□□□□ -0.32
SRMP1-201ENST00000398959 POLR3EQ9NVU0 708 aa13.06□□□□□ -0.32
SRMP1-201ENST00000398959 GRIN2DO15399 1336 aa13.06□□□□□ -0.32
SRMP1-201ENST00000398959 UMODL1Q5DID0 1318 aa13.06□□□□□ -0.32
SRMP1-201ENST00000398959 RAD50Q92878 1312 aa13.06□□□□□ -0.32
SRMP1-201ENST00000398959 PTPRSQ13332 1948 aa13.05□□□□□ -0.32
SRMP1-201ENST00000398959 MYL3P08590 195 aa13.05□□□□□ -0.32
SRMP1-201ENST00000398959 USH1GQ495M9 461 aa13.05□□□□□ -0.32
SRMP1-201ENST00000398959 BRDTQ58F21 947 aaPredicted RBP13.05□□□□□ -0.32
SRMP1-201ENST00000398959 GPATCH4Q5T3I0 446 aaKnown RBP13.05□□□□□ -0.32
SRMP1-201ENST00000398959 CLEC4DQ8WXI8 215 aa13.05□□□□□ -0.32
SRMP1-201ENST00000398959 HERVK_113Q902F9 699 aa13.05□□□□□ -0.32
SRMP1-201ENST00000398959 NOC4LQ9BVI4 516 aaKnown RBP13.05□□□□□ -0.32
SRMP1-201ENST00000398959 GPHNQ9NQX3 736 aaPredicted RBP13.05□□□□□ -0.32
SRMP1-201ENST00000398959 MSRAQ9UJ68 235 aa13.05□□□□□ -0.32
SRMP1-201ENST00000398959 NEDD4P46934 1319 aa13.05□□□□□ -0.32
SRMP1-201ENST00000398959 WDR19Q8NEZ3 1342 aa13.05□□□□□ -0.32
SRMP1-201ENST00000398959 TET1Q8NFU7 2136 aa13.04□□□□□ -0.32
SRMP1-201ENST00000398959 RBM47A0AV96 593 aaKnown RBP13.04□□□□□ -0.32
SRMP1-201ENST00000398959 B4DLN1 442 aa13.04□□□□□ -0.32
SRMP1-201ENST00000398959 NKRFO15226 690 aaKnown RBP eCLIP13.04□□□□□ -0.32
SRMP1-201ENST00000398959 GOLGA8HP0CJ92 632 aa13.04□□□□□ -0.32
SRMP1-201ENST00000398959 SNHG28P0DPA3 235 aa13.04□□□□□ -0.32
SRMP1-201ENST00000398959 MRPL12P52815 198 aaKnown RBP13.04□□□□□ -0.32
SRMP1-201ENST00000398959 RPS6P62753 249 aaKnown RBP13.04□□□□□ -0.32
SRMP1-201ENST00000398959 PPP2R5BQ15173 497 aa13.04□□□□□ -0.32
SRMP1-201ENST00000398959 RAB30Q15771 203 aa13.04□□□□□ -0.32
SRMP1-201ENST00000398959 CCDC178Q5BJE1 867 aa13.04□□□□□ -0.32
SRMP1-201ENST00000398959 CWC27Q6UX04 472 aaKnown RBP13.04□□□□□ -0.32
SRMP1-201ENST00000398959 OTOP2Q7RTS6 562 aa13.04□□□□□ -0.32
SRMP1-201ENST00000398959 CHD1LQ86WJ1 897 aa13.04□□□□□ -0.32
SRMP1-201ENST00000398959 IQCA1Q86XH1 822 aa13.04□□□□□ -0.32
SRMP1-201ENST00000398959 SMC5Q8IY18 1101 aa13.04□□□□□ -0.32
SRMP1-201ENST00000398959 RPUSD2Q8IZ73 545 aaKnown RBP13.04□□□□□ -0.32
SRMP1-201ENST00000398959 DNERQ8NFT8 737 aa13.04□□□□□ -0.32
SRMP1-201ENST00000398959 ALDH8A1Q9H2A2 487 aaPredicted RBP13.04□□□□□ -0.32
SRMP1-201ENST00000398959 DIAPH3Q9NSV4 1193 aa13.04□□□□□ -0.32
SRMP1-201ENST00000398959 CXXC1Q9P0U4 656 aaPredicted RBP13.04□□□□□ -0.32
SRMP1-201ENST00000398959 CHD9Q3L8U1 2897 aa13.04□□□□□ -0.32
SRMP1-201ENST00000398959 BAZ2BQ9UIF8 2168 aaKnown RBP13.04□□□□□ -0.32
SRMP1-201ENST00000398959 DOCK5Q9H7D0 1870 aa13.04□□□□□ -0.32
SRMP1-201ENST00000398959 KDM4AO75164 1064 aa13.03□□□□□ -0.32
SRMP1-201ENST00000398959 SUPT20HL2P0C7V6 817 aa13.03□□□□□ -0.32
SRMP1-201ENST00000398959 PURAQ00577 322 aaKnown RBP13.03□□□□□ -0.32
SRMP1-201ENST00000398959 FAM47CQ5HY64 1035 aa13.03□□□□□ -0.32
SRMP1-201ENST00000398959 DGKHQ86XP1 1220 aa13.03□□□□□ -0.32
SRMP1-201ENST00000398959 PLEKHM2Q8IWE5 1019 aa13.03□□□□□ -0.32
SRMP1-201ENST00000398959 PNMA1Q8ND90 353 aa13.03□□□□□ -0.32
SRMP1-201ENST00000398959 SCFD2Q8WU76 684 aa13.03□□□□□ -0.32
SRMP1-201ENST00000398959 SCLYQ96I15 445 aa13.03□□□□□ -0.32
SRMP1-201ENST00000398959 MTG1Q9BT17 334 aaPredicted RBP13.03□□□□□ -0.32
SRMP1-201ENST00000398959 WNT8AQ9H1J5 351 aa13.03□□□□□ -0.32
SRMP1-201ENST00000398959 CPVLQ9H3G5 476 aa13.03□□□□□ -0.32
SRMP1-201ENST00000398959 PRDM12Q9H4Q4 367 aa13.03□□□□□ -0.32
SRMP1-201ENST00000398959 KAT14Q9H8E8 782 aa13.03□□□□□ -0.32
SRMP1-201ENST00000398959 TRMT13Q9NUP7 481 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms