RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 SASS6Q6UVJ0 657 aa21.97■■□□□ 1.11
PDLIM2-204ENST00000397760 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.97■■□□□ 1.11
PDLIM2-204ENST00000397760 R3HCC1Q9Y3T6 440 aaKnown RBP21.97■■□□□ 1.11
PDLIM2-204ENST00000397760 ABCB11O95342 1321 aa21.97■■□□□ 1.11
PDLIM2-204ENST00000397760 MEIS2O14770 477 aa21.96■■□□□ 1.11
PDLIM2-204ENST00000397760 OPLAHO14841 1288 aa21.96■■□□□ 1.11
PDLIM2-204ENST00000397760 MARCKSP29966 332 aaPredicted RBP21.96■■□□□ 1.11
PDLIM2-204ENST00000397760 TYRO3Q06418 890 aa21.96■■□□□ 1.11
PDLIM2-204ENST00000397760 ZNF174Q15697 407 aa21.96■■□□□ 1.11
PDLIM2-204ENST00000397760 WNK4Q96J92 1243 aa21.96■■□□□ 1.11
PDLIM2-204ENST00000397760 DACT1Q9NYF0 836 aa21.96■■□□□ 1.11
PDLIM2-204ENST00000397760 PCDHA7Q9UN72 937 aa21.96■■□□□ 1.11
PDLIM2-204ENST00000397760 ADAMTS5Q9UNA0 930 aa21.96■■□□□ 1.11
PDLIM2-204ENST00000397760 HOXA7P31268 230 aaPredicted RBP21.96■■□□□ 1.11
PDLIM2-204ENST00000397760 SNAPC2Q13487 334 aa21.96■■□□□ 1.11
PDLIM2-204ENST00000397760 FASTKD5Q7L8L6 764 aaKnown RBP21.96■■□□□ 1.11
PDLIM2-204ENST00000397760 JMYQ8N9B5 988 aa21.96■■□□□ 1.11
PDLIM2-204ENST00000397760 TBCKQ8TEA7 893 aa21.96■■□□□ 1.11
PDLIM2-204ENST00000397760 MYPNQ86TC9 1320 aa21.96■■□□□ 1.11
PDLIM2-204ENST00000397760 PPP6R2O75170 966 aa21.95■■□□□ 1.1
PDLIM2-204ENST00000397760 SPTLC3Q9NUV7 552 aa21.95■■□□□ 1.1
PDLIM2-204ENST00000397760 PNMA2Q9UL42 364 aa21.95■■□□□ 1.1
PDLIM2-204ENST00000397760 AGTPBP1Q9UPW5 1226 aa21.95■■□□□ 1.1
PDLIM2-204ENST00000397760 MRVI1Q9Y6F6 885 aa21.95■■□□□ 1.1
PDLIM2-204ENST00000397760 SPDYE16A6NNV3 312 aaPredicted RBP21.94■■□□□ 1.1
PDLIM2-204ENST00000397760 MOGSQ13724 837 aa21.94■■□□□ 1.1
PDLIM2-204ENST00000397760 NEK8Q86SG6 692 aa21.94■■□□□ 1.1
PDLIM2-204ENST00000397760 REPS2Q8NFH8 660 aa21.94■■□□□ 1.1
PDLIM2-204ENST00000397760 CTAGE5O15320 804 aa21.94■■□□□ 1.1
PDLIM2-204ENST00000397760 BMP15O95972 392 aa21.94■■□□□ 1.1
PDLIM2-204ENST00000397760 ALAS1P13196 640 aa21.94■■□□□ 1.1
PDLIM2-204ENST00000397760 MCM7P33993 719 aa21.94■■□□□ 1.1
PDLIM2-204ENST00000397760 MCTP2Q6DN12 878 aa21.94■■□□□ 1.1
PDLIM2-204ENST00000397760 PIK3CDO00329 1044 aa21.93■■□□□ 1.1
PDLIM2-204ENST00000397760 DYNC1I1O14576 645 aa21.93■■□□□ 1.1
PDLIM2-204ENST00000397760 CFBP00751 764 aa21.93■■□□□ 1.1
PDLIM2-204ENST00000397760 HOXA13P31271 388 aaPredicted RBP21.93■■□□□ 1.1
PDLIM2-204ENST00000397760 AP3B2Q13367 1082 aa21.93■■□□□ 1.1
PDLIM2-204ENST00000397760 LETM2Q2VYF4 491 aa21.93■■□□□ 1.1
PDLIM2-204ENST00000397760 ADALQ6DHV7 355 aa21.93■■□□□ 1.1
PDLIM2-204ENST00000397760 TEX2Q8IWB9 1127 aa21.93■■□□□ 1.1
PDLIM2-204ENST00000397760 MAP7D2Q96T17 732 aa21.93■■□□□ 1.1
PDLIM2-204ENST00000397760 GCOM1H8Y6P7 765 aaPredicted RBP21.92■■□□□ 1.1
PDLIM2-204ENST00000397760 KIF3CO14782 793 aa21.92■■□□□ 1.1
PDLIM2-204ENST00000397760 POLR2MP0CAP2 368 aa21.92■■□□□ 1.1
PDLIM2-204ENST00000397760 OAZ1P54368 228 aa21.92■■□□□ 1.1
PDLIM2-204ENST00000397760 IRX3P78415 501 aaPredicted RBP21.92■■□□□ 1.1
PDLIM2-204ENST00000397760 TBC1D5Q92609 795 aa21.92■■□□□ 1.1
PDLIM2-204ENST00000397760 PRIMPOLQ96LW4 560 aa21.92■■□□□ 1.1
PDLIM2-204ENST00000397760 FOSP01100 380 aaPredicted RBP21.92■■□□□ 1.1
PDLIM2-204ENST00000397760 HUNKP57058 714 aa21.92■■□□□ 1.1
PDLIM2-204ENST00000397760 MKRN3Q13064 507 aaKnown RBP21.92■■□□□ 1.1
PDLIM2-204ENST00000397760 PTGDRQ13258 359 aa21.92■■□□□ 1.1
PDLIM2-204ENST00000397760 NOLC1Q14978 699 aaKnown RBP eCLIP21.92■■□□□ 1.1
PDLIM2-204ENST00000397760 TMEM132BQ14DG7 1078 aa21.92■■□□□ 1.1
PDLIM2-204ENST00000397760 AXDND1Q5T1B0 1012 aaPredicted RBP21.92■■□□□ 1.1
PDLIM2-204ENST00000397760 CLEC4DQ8WXI8 215 aa21.92■■□□□ 1.1
PDLIM2-204ENST00000397760 P2RX7Q99572 595 aaKnown RBP21.92■■□□□ 1.1
PDLIM2-204ENST00000397760 ANO3Q9BYT9 981 aa21.92■■□□□ 1.1
PDLIM2-204ENST00000397760 HOMER2Q9NSB8 354 aa21.92■■□□□ 1.1
PDLIM2-204ENST00000397760 MORC2Q9Y6X9 1032 aaPredicted RBP21.92■■□□□ 1.1
PDLIM2-204ENST00000397760 SPDYE3A6NKU9 549 aa21.91■■□□□ 1.1
PDLIM2-204ENST00000397760 CCNT1O60563 726 aaKnown RBP21.91■■□□□ 1.1
PDLIM2-204ENST00000397760 PABPC4Q13310 644 aaKnown RBP eCLIP21.91■■□□□ 1.1
PDLIM2-204ENST00000397760 GPAT2Q6NUI2 795 aa21.91■■□□□ 1.1
PDLIM2-204ENST00000397760 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.91■■□□□ 1.1
PDLIM2-204ENST00000397760 KRI1Q8N9T8 703 aaKnown RBP21.91■■□□□ 1.1
PDLIM2-204ENST00000397760 ASCC2Q9H1I8 757 aaPredicted RBP21.91■■□□□ 1.1
PDLIM2-204ENST00000397760 ZNF214Q9UL59 606 aaPredicted RBP21.91■■□□□ 1.1
PDLIM2-204ENST00000397760 A0A1W2PQ27 194 aa21.9■■□□□ 1.1
PDLIM2-204ENST00000397760 A0A1W2PQ64 194 aa21.9■■□□□ 1.1
PDLIM2-204ENST00000397760 A0A1W2PQD8 194 aa21.9■■□□□ 1.1
PDLIM2-204ENST00000397760 ATP2A1O14983 1001 aa21.9■■□□□ 1.1
PDLIM2-204ENST00000397760 CUTAO60888 179 aa21.9■■□□□ 1.1
PDLIM2-204ENST00000397760 PTPREP23469 700 aa21.9■■□□□ 1.1
PDLIM2-204ENST00000397760 GTF2A2P52657 109 aa21.9■■□□□ 1.1
PDLIM2-204ENST00000397760 ATP2C1P98194 919 aaPredicted RBP21.9■■□□□ 1.1
PDLIM2-204ENST00000397760 SPRYD7Q5W111 196 aa21.9■■□□□ 1.1
PDLIM2-204ENST00000397760 MCF2L2Q86YR7 1114 aa21.9■■□□□ 1.1
PDLIM2-204ENST00000397760 CCAR1Q8IX12 1150 aaKnown RBP21.9■■□□□ 1.1
PDLIM2-204ENST00000397760 TRERF1Q96PN7 1200 aa21.9■■□□□ 1.1
PDLIM2-204ENST00000397760 PDCL3Q9H2J4 239 aa21.9■■□□□ 1.1
PDLIM2-204ENST00000397760 PTPRFP10586 1907 aa21.9■■□□□ 1.1
PDLIM2-204ENST00000397760 PASKQ96RG2 1323 aa21.9■■□□□ 1.1
PDLIM2-204ENST00000397760 NFIBO00712 420 aa21.9■■□□□ 1.1
PDLIM2-204ENST00000397760 CETPP11597 493 aa21.9■■□□□ 1.1
PDLIM2-204ENST00000397760 MUM1L1Q5H9M0 696 aa21.9■■□□□ 1.1
PDLIM2-204ENST00000397760 SNRNP48Q6IEG0 339 aaKnown RBP21.9■■□□□ 1.1
PDLIM2-204ENST00000397760 MTERF4Q7Z6M4 381 aaKnown RBP21.9■■□□□ 1.1
PDLIM2-204ENST00000397760 FCHSD1Q86WN1 690 aa21.9■■□□□ 1.1
PDLIM2-204ENST00000397760 MS4A4AQ96JQ5 239 aa21.9■■□□□ 1.1
PDLIM2-204ENST00000397760 CLIC6Q96NY7 704 aa21.9■■□□□ 1.1
PDLIM2-204ENST00000397760 FBXO2Q9UK22 296 aaPredicted RBP21.9■■□□□ 1.1
PDLIM2-204ENST00000397760 SRPRBQ9Y5M8 271 aaKnown RBP21.9■■□□□ 1.1
PDLIM2-204ENST00000397760 LOC285556D6RIA3 1793 aa21.89■■□□□ 1.09
PDLIM2-204ENST00000397760 EDIL3O43854 480 aa21.89■■□□□ 1.09
PDLIM2-204ENST00000397760 ZBTB48P10074 688 aaPredicted RBP21.89■■□□□ 1.09
PDLIM2-204ENST00000397760 OSBPP22059 807 aa21.89■■□□□ 1.09
PDLIM2-204ENST00000397760 PLS1Q14651 629 aa21.89■■□□□ 1.09
PDLIM2-204ENST00000397760 LBX2Q6XYB7 198 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms