RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 CALM2P0DP24 149 aa16.9■□□□□ 0.3
SEC13-208ENST00000397109 CALM3P0DP25 149 aa16.9■□□□□ 0.3
SEC13-208ENST00000397109 ADCYAP1R1P41586 468 aa16.9■□□□□ 0.3
SEC13-208ENST00000397109 GNAQP50148 359 aa16.9■□□□□ 0.3
SEC13-208ENST00000397109 TNFAIP2Q03169 654 aa16.9■□□□□ 0.3
SEC13-208ENST00000397109 IQSEC1Q6DN90 963 aa16.9■□□□□ 0.3
SEC13-208ENST00000397109 SLC39A5Q6ZMH5 540 aa16.9■□□□□ 0.3
SEC13-208ENST00000397109 SAMD3Q8N6K7 520 aa16.9■□□□□ 0.3
SEC13-208ENST00000397109 KLHDC9Q8NEP7 349 aa16.9■□□□□ 0.3
SEC13-208ENST00000397109 PURBQ96QR8 312 aaKnown RBP16.9■□□□□ 0.3
SEC13-208ENST00000397109 LZTS2Q9BRK4 669 aa16.9■□□□□ 0.3
SEC13-208ENST00000397109 SYNRGQ9UMZ2 1314 aa16.89■□□□□ 0.29
SEC13-208ENST00000397109 CST5P28325 142 aaPredicted RBP16.89■□□□□ 0.29
SEC13-208ENST00000397109 SMARCA1P28370 1054 aa16.89■□□□□ 0.29
SEC13-208ENST00000397109 ATN1P54259 1190 aaPredicted RBP16.89■□□□□ 0.29
SEC13-208ENST00000397109 GJA9P57773 515 aa16.89■□□□□ 0.29
SEC13-208ENST00000397109 NOL8Q76FK4 1167 aaKnown RBP16.89■□□□□ 0.29
SEC13-208ENST00000397109 PCSK9Q8NBP7 692 aaKnown RBP16.89■□□□□ 0.29
SEC13-208ENST00000397109 LENG1Q96BZ8 264 aaPredicted RBP16.89■□□□□ 0.29
SEC13-208ENST00000397109 UPF3AQ9H1J1 476 aaKnown RBP16.89■□□□□ 0.29
SEC13-208ENST00000397109 UPF2Q9HAU5 1272 aaKnown RBP16.89■□□□□ 0.29
SEC13-208ENST00000397109 MAP3K20Q9NYL2 800 aaKnown RBP16.89■□□□□ 0.29
SEC13-208ENST00000397109 PCDHA1Q9Y5I3 950 aa16.89■□□□□ 0.29
SEC13-208ENST00000397109 LCTP09848 1927 aa16.89■□□□□ 0.29
SEC13-208ENST00000397109 PNMA6FA0A0J9YX94 578 aa16.88■□□□□ 0.29
SEC13-208ENST00000397109 MOXD2PA6NHM9 499 aa16.88■□□□□ 0.29
SEC13-208ENST00000397109 HMGB1P09429 215 aaKnown RBP16.88■□□□□ 0.29
SEC13-208ENST00000397109 NKX3-2P78367 333 aa16.88■□□□□ 0.29
SEC13-208ENST00000397109 PDE4DQ08499 809 aa16.88■□□□□ 0.29
SEC13-208ENST00000397109 C1orf53Q5VUE5 145 aa16.88■□□□□ 0.29
SEC13-208ENST00000397109 TAPT1Q6NXT6 567 aa16.88■□□□□ 0.29
SEC13-208ENST00000397109 DHX32Q7L7V1 743 aaKnown RBP16.88■□□□□ 0.29
SEC13-208ENST00000397109 EEPD1Q7L9B9 569 aa16.88■□□□□ 0.29
SEC13-208ENST00000397109 GPHNQ9NQX3 736 aaPredicted RBP16.88■□□□□ 0.29
SEC13-208ENST00000397109 Q9Y3F1 56 aa16.88■□□□□ 0.29
SEC13-208ENST00000397109 SLC12A7Q9Y666 1083 aa16.88■□□□□ 0.29
SEC13-208ENST00000397109 CYTH3O43739 400 aa16.87■□□□□ 0.29
SEC13-208ENST00000397109 C6orf222P0C671 652 aaPredicted RBP16.87■□□□□ 0.29
SEC13-208ENST00000397109 EDNRBP24530 442 aa16.87■□□□□ 0.29
SEC13-208ENST00000397109 RTP1P59025 263 aa16.87■□□□□ 0.29
SEC13-208ENST00000397109 SNX17Q15036 470 aa16.87■□□□□ 0.29
SEC13-208ENST00000397109 KCNA10Q16322 511 aa16.87■□□□□ 0.29
SEC13-208ENST00000397109 SYNE3Q6ZMZ3 975 aa16.87■□□□□ 0.29
SEC13-208ENST00000397109 SGMS1Q86VZ5 419 aa16.87■□□□□ 0.29
SEC13-208ENST00000397109 HOMER1Q86YM7 354 aa16.87■□□□□ 0.29
SEC13-208ENST00000397109 FBXO16Q8IX29 292 aaPredicted RBP16.87■□□□□ 0.29
SEC13-208ENST00000397109 RASEFQ8IZ41 740 aa16.87■□□□□ 0.29
SEC13-208ENST00000397109 SYTL5Q8TDW5 730 aaPredicted RBP16.87■□□□□ 0.29
SEC13-208ENST00000397109 FERMT2Q96AC1 680 aa16.87■□□□□ 0.29
SEC13-208ENST00000397109 PIGSQ96S52 555 aa16.87■□□□□ 0.29
SEC13-208ENST00000397109 SPZ1Q9BXG8 430 aa16.87■□□□□ 0.29
SEC13-208ENST00000397109 AP5M1Q9H0R1 490 aa16.87■□□□□ 0.29
SEC13-208ENST00000397109 ZMYND8Q9ULU4 1186 aaPredicted RBP16.87■□□□□ 0.29
SEC13-208ENST00000397109 COLQQ9Y215 455 aaPredicted RBP16.87■□□□□ 0.29
SEC13-208ENST00000397109 GNEQ9Y223 722 aaKnown RBP16.87■□□□□ 0.29
SEC13-208ENST00000397109 ADCY6O43306 1168 aa16.86■□□□□ 0.29
SEC13-208ENST00000397109 ACLYP53396 1101 aa16.86■□□□□ 0.29
SEC13-208ENST00000397109 EXOSC10Q01780 885 aaKnown RBP16.86■□□□□ 0.29
SEC13-208ENST00000397109 GHRHRQ02643 423 aa16.86■□□□□ 0.29
SEC13-208ENST00000397109 SLC35G1Q2M3R5 365 aa16.86■□□□□ 0.29
SEC13-208ENST00000397109 HABP4Q5JVS0 413 aaKnown RBP16.86■□□□□ 0.29
SEC13-208ENST00000397109 GNASQ5JWF2 1037 aa16.86■□□□□ 0.29
SEC13-208ENST00000397109 CCSAPQ6IQ19 270 aaPredicted RBP16.86■□□□□ 0.29
SEC13-208ENST00000397109 CHRDL2Q6WN34 429 aa16.86■□□□□ 0.29
SEC13-208ENST00000397109 NSUN6Q8TEA1 469 aaKnown RBP16.86■□□□□ 0.29
SEC13-208ENST00000397109 TBC1D5Q92609 795 aa16.86■□□□□ 0.29
SEC13-208ENST00000397109 KCNB2Q92953 911 aa16.86■□□□□ 0.29
SEC13-208ENST00000397109 IWS1Q96ST2 819 aa16.86■□□□□ 0.29
SEC13-208ENST00000397109 MYL10Q9BUA6 226 aa16.86■□□□□ 0.29
SEC13-208ENST00000397109 LRRC2Q9BYS8 371 aa16.86■□□□□ 0.29
SEC13-208ENST00000397109 PDGFCQ9NRA1 345 aa16.86■□□□□ 0.29
SEC13-208ENST00000397109 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.86■□□□□ 0.29
SEC13-208ENST00000397109 A0A1W2PQ45 241 aaPredicted RBP16.86■□□□□ 0.29
SEC13-208ENST00000397109 A0A1W2PQY0 241 aa16.86■□□□□ 0.29
SEC13-208ENST00000397109 RBM47A0AV96 593 aaKnown RBP16.86■□□□□ 0.29
SEC13-208ENST00000397109 PPP1R11O60927 126 aaPredicted RBP16.86■□□□□ 0.29
SEC13-208ENST00000397109 CFBP00751 764 aa16.86■□□□□ 0.29
SEC13-208ENST00000397109 HSPA4P34932 840 aa16.86■□□□□ 0.29
SEC13-208ENST00000397109 COL9A3Q14050 684 aaPredicted RBP16.86■□□□□ 0.29
SEC13-208ENST00000397109 TLK2Q86UE8 772 aa16.86■□□□□ 0.29
SEC13-208ENST00000397109 RRP36Q96EU6 259 aaKnown RBP16.86■□□□□ 0.29
SEC13-208ENST00000397109 ATP11BQ9Y2G3 1177 aa16.86■□□□□ 0.29
SEC13-208ENST00000397109 DDX49Q9Y6V7 483 aaKnown RBP16.86■□□□□ 0.29
SEC13-208ENST00000397109 TRIOBPQ9H2D6 2365 aa16.85■□□□□ 0.29
SEC13-208ENST00000397109 ZEB2O60315 1214 aa16.85■□□□□ 0.29
SEC13-208ENST00000397109 SMPD1P17405 629 aa16.85■□□□□ 0.29
SEC13-208ENST00000397109 HSD17B4P51659 736 aa16.85■□□□□ 0.29
SEC13-208ENST00000397109 ADCK5Q3MIX3 580 aa16.85■□□□□ 0.29
SEC13-208ENST00000397109 DUSP28Q4G0W2 176 aa16.85■□□□□ 0.29
SEC13-208ENST00000397109 GLT1D1Q96MS3 346 aa16.85■□□□□ 0.29
SEC13-208ENST00000397109 TAAR1Q96RJ0 339 aa16.85■□□□□ 0.29
SEC13-208ENST00000397109 RMDN3Q96TC7 470 aa16.85■□□□□ 0.29
SEC13-208ENST00000397109 WDR11Q9BZH6 1224 aa16.85■□□□□ 0.29
SEC13-208ENST00000397109 STARD7Q9NQZ5 370 aa16.85■□□□□ 0.29
SEC13-208ENST00000397109 PRKAG2Q9UGJ0 569 aa16.85■□□□□ 0.29
SEC13-208ENST00000397109 SEC63Q9UGP8 760 aaKnown RBP16.85■□□□□ 0.29
SEC13-208ENST00000397109 ELP1O95163 1332 aa16.84■□□□□ 0.29
SEC13-208ENST00000397109 LRRC37A2A6NM11 1700 aa16.84■□□□□ 0.29
SEC13-208ENST00000397109 MYADML2A6NDP7 307 aa16.84■□□□□ 0.29
SEC13-208ENST00000397109 OPLAHO14841 1288 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms